Unexpected role of the steroid-deficiency protein ecdysoneless in pre-mRNA splicing

. 2014 Apr ; 10 (4) : e1004287. [epub] 20140410

Jazyk angličtina Země Spojené státy americké Médium electronic-ecollection

Typ dokumentu časopisecké články, práce podpořená grantem

Perzistentní odkaz   https://www.medvik.cz/link/pmid24722212
Odkazy

PubMed 24722212
PubMed Central PMC3983036
DOI 10.1371/journal.pgen.1004287
PII: PGENETICS-D-13-02941
Knihovny.cz E-zdroje

The steroid hormone ecdysone coordinates insect growth and development, directing the major postembryonic transition of forms, metamorphosis. The steroid-deficient ecdysoneless1 (ecd1) strain of Drosophila melanogaster has long served to assess the impact of ecdysone on gene regulation, morphogenesis, or reproduction. However, ecd also exerts cell-autonomous effects independently of the hormone, and mammalian Ecd homologs have been implicated in cell cycle regulation and cancer. Why the Drosophila ecd1 mutants lack ecdysone has not been resolved. Here, we show that in Drosophila cells, Ecd directly interacts with core components of the U5 snRNP spliceosomal complex, including the conserved Prp8 protein. In accord with a function in pre-mRNA splicing, Ecd and Prp8 are cell-autonomously required for survival of proliferating cells within the larval imaginal discs. In the steroidogenic prothoracic gland, loss of Ecd or Prp8 prevents splicing of a large intron from CYP307A2/spookier (spok) pre-mRNA, thus eliminating this essential ecdysone-biosynthetic enzyme and blocking the entry to metamorphosis. Human Ecd (hEcd) can substitute for its missing fly ortholog. When expressed in the Ecd-deficient prothoracic gland, hEcd re-establishes spok pre-mRNA splicing and protein expression, restoring ecdysone synthesis and normal development. Our work identifies Ecd as a novel pre-mRNA splicing factor whose function has been conserved in its human counterpart. Whether the role of mammalian Ecd in cancer involves pre-mRNA splicing remains to be discovered.

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Thummel CS (2001) Molecular mechanisms of developmental timing in C. elegans and Drosophila. Dev Cell 1: 453–465. PubMed

Mirth CK, Riddiford LM (2007) Size assessment and growth control: how adult size is determined in insects. Bioessays 29: 344–355. PubMed

Yamanaka N, Rewitz KF, O'Connor MB (2013) Ecdysone control of developmental transitions: lessons from Drosophila research. Annu Rev Entomol 58: 497–516. PubMed PMC

Ou Q, King-Jones K (2013) What goes up must come down: transcription factors have their say in making ecdysone pulses. Curr Top Dev Biol 103: 35–71. PubMed

Rewitz KF, Yamanaka N, O'Connor MB (2013) Developmental checkpoints and feedback circuits time insect maturation. Curr Top Dev Biol 103: 1–33. PubMed PMC

Yoshiyama-Yanagawa T, Enya S, Shimada-Niwa Y, Yaguchi S, Haramoto Y, et al. (2011) The conserved Rieske oxygenase DAF-36/Neverland is a novel cholesterol-metabolizing enzyme. J Biol Chem 286: 25756–25762. PubMed PMC

Niwa R, Namiki T, Ito K, Shimada-Niwa Y, Kiuchi M, et al. (2010) Non-molting glossy/shroud encodes a short-chain dehydrogenase/reductase that functions in the “Black Box” of the ecdysteroid biosynthesis pathway. Development 137: 1991–1999. PubMed

Huang X, Warren JT, Gilbert LI (2008) New players in the regulation of ecdysone biosynthesis. J Genet Genomics 35: 1–10. PubMed

Iga M, Kataoka H (2012) Recent studies on insect hormone metabolic pathways mediated by cytochrome P450 enzymes. Biol Pharm Bull 35: 838–843. PubMed

Petryk A, Warren JT, Marqués G, Jarcho MP, Gilbert LI, et al. (2003) Shade is the Drosophila P450 enzyme that mediates the hydroxylation of ecdysone to the steroid insect molting hormone 20-hydroxyecdysone. Proc Natl Acad Sci USA 100: 13773–13778. PubMed PMC

Garen A, Kauvar L, Lepesant JA (1977) Roles of ecdysone in Drosophila development. Proc Natl Acad Sci USA 74: 5099–5103. PubMed PMC

Henrich VC, Tucker RL, Maroni G, Gilbert LI (1987) The ecdysoneless (ecd1ts) mutation disrupts ecdysteroid synthesis autonomously in the ring gland of Drosophila melanogaster. Dev Biol 120: 50–55. PubMed

Gaziova I, Bonnette PC, Henrich VC, Jindra M (2004) Cell-autonomous roles of the ecdysoneless gene in Drosophila development and oogenesis. Development 131: 2715–2725. PubMed

Kim JH, Gurumurthy CB, Naramura M, Zhang Y, Dudley AT, et al. (2009) Role of mammalian Ecdysoneless in cell cycle regulation. J Biol Chem 284: 26402–26410. PubMed PMC

Zhao X, Mirza S, Alshareeda A, Zhang Y, Gurumurthy CB, et al. (2012) Overexpression of a novel cell cycle regulator ecdysoneless in breast cancer: a marker of poor prognosis in HER2/neu-overexpressing breast cancer patients. Breast Cancer Res Treat 134: 171–180. PubMed PMC

Dey P, Rachagani S, Chakraborty S, Singh PK, Zhao X, et al. (2012) Overexpression of ecdysoneless in pancreatic cancer and its role in oncogenesis by regulating glycolysis. Clin Cancer Res 18: 6188–6198. PubMed PMC

Guruharsha KG, Rual J-F, Zhai B, Mintseris J, Vaidya P, et al. (2011) A protein complex network of Drosophila melanogaster. Cell 147: 690–703. PubMed PMC

Grainger RJ, Beggs JD (2005) Prp8 protein: at the heart of the spliceosome. RNA 11: 533–557. PubMed PMC

Havugimana PC, Hart GT, Nepusz T, Yang H, Turinsky AL, et al. (2012) A census of human soluble protein complexes. Cell 150: 1068–1081. PubMed PMC

Maniatis T, Reed R (2002) An extensive network of coupling among gene expression machines. Nature 416: 499–506. PubMed

Jurica MS, Moore MJ (2003) Pre-mRNA splicing: awash in a sea of proteins. Mol Cell 12: 5–14. PubMed

Wahl MC, Will CL, Lührmann R (2009) The spliceosome: design principles of a dynamic RNP machine. Cell 136: 701–718. PubMed

Will CL, Lührmann R (2011) Spliceosome structure and function. Cold Spring Harb Perspect Biol 3 ((7)) . pii: a003707. PubMed PMC

Andersen DS, Tapon N (2008) Drosophila MFAP1 is required for pre-mRNA processing and G2/M progression. J Biol Chem 283: 31256–31267. PubMed PMC

Chen P-H, Lee C-I, Weng Y-T, Tarn W-Y, Tsao Y-P, et al. (2013) BCAS2 is essential for Drosophila viability and functions in pre-mRNA splicing. RNA 19: 208–218. PubMed PMC

Coelho CMA, Kolevski B, Walker CD, Lavagi I, Shaw T, et al. (2005) A genetic screen for dominant modifiers of a small-wing phenotype in Drosophila melanogaster identifies proteins involved in splicing and translation. Genetics 171: 597–614. PubMed PMC

Ray P, Luo X, Rao EJ, Basha A, Woodruff EA, et al. (2010) The splicing factor Prp31 is essential for photoreceptor development in Drosophila. Protein Cell 1: 267–274. PubMed PMC

Herold N, Will CL, Wolf E, Kastner B, Urlaub H, et al. (2009) Conservation of the protein composition and electron microscopy structure of Drosophila melanogaster and human spliceosomal complexes. Mol Cell Biol 29: 281–301. PubMed PMC

Boon K-L, Grainger RJ, Ehsani P, Barrass JD, Auchynnikava T, et al. (2007) prp8 mutations that cause human retinitis pigmentosa lead to a U5 snRNP maturation defect in yeast. Nat Struct Mol Biol 14: 1077–1083. PubMed PMC

Weber G, Cristão VF, de L Alves F, Santos KF, Holton N, et al. (2011) Mechanism for Aar2p function as a U5 snRNP assembly factor. Genes Dev 25: 1601–1612. PubMed PMC

Kim JH, Gurumurthy CB, Band H, Band V (2010) Biochemical characterization of human Ecdysoneless reveals a role in transcriptional regulation. Biol Chem 391: 9–19. PubMed PMC

Lee T, Luo L (2001) Mosaic analysis with a repressible cell marker (MARCM) for Drosophila neural development. Trends Neurosci 24: 251–254. PubMed

Ono H, Rewitz KF, Shinoda T, Itoyama K, Petryk A, et al. (2006) Spook and Spookier code for stage-specific components of the ecdysone biosynthetic pathway in Diptera. Dev Biol 298: 555–570. PubMed

Warren JT, O'Connor MB, Gilbert LI (2009) Studies on the Black Box: incorporation of 3-oxo-7-dehydrocholesterol into ecdysteroids by Drosophila melanogaster and Manduca sexta. Insect Biochem Mol Biol 39: 677–687. PubMed

Listerman I, Sapra AK, Neugebauer KM (2006) Cotranscriptional coupling of splicing factor recruitment and precursor messenger RNA splicing in mammalian cells. Nat Struct Mol Biol 13: 815–822. PubMed

Pleiss JA, Whitworth GB, Bergkessel M, Guthrie C (2007) Transcript specificity in yeast pre-mRNA splicing revealed by mutations in core spliceosomal components. PLoS Biol 5: e90. PubMed PMC

Stanek D, Pridalová-Hnilicová J, Novotný I, Huranová M, Blazíková M, et al. (2008) Spliceosomal small nuclear ribonucleoprotein particles repeatedly cycle through Cajal bodies. Mol Biol Cell 19: 2534–2543. PubMed PMC

McBrayer Z, Ono H, Shimell M, Parvy J-P, Beckstead RB, et al. (2007) Prothoracicotropic hormone regulates developmental timing and body size in Drosophila. Dev Cell 13: 857–871. PubMed PMC

Gibbens YY, Warren JT, Gilbert LI, O'Connor MB (2011) Neuroendocrine regulation of Drosophila metamorphosis requires TGFβ/Activin signaling. Development 138: 2693–2703. PubMed PMC

Warren JT, Bachmann JS, Dai JD, Gilbert LI (1996) Differential incorporation of cholesterol and cholesterol derivatives into ecdysteroids by the larval ring glands and adult ovaries of Drosophila melanogaster: a putative explanation for the l(3)ecd1 mutation. Insect Biochem Mol Biol 26: 931–943. PubMed

Redfern CPF, Bownes M (1983) Pleiotropic effects of the “ecdysoneless-1” mutation of Drosophila melanogaster. Mol Gen Genet 189: 432–440.

Sliter TJ (1989) Imaginal disc-autonomous expression of a defect in sensory bristle patterning caused by the lethal(3)ecdysoneless1 (1(3)ecd1) mutation of Drosophila melanogaster. Development 106: 347–354. PubMed

Davis MB, Li T (2013) Genomic analysis of the ecdysone steroid signal at metamorphosis onset using ecdysoneless and EcRnull Drosophila melanogaster mutants. Genes Genomics 35: 21–46. PubMed PMC

Fong YW, Zhou Q (2001) Stimulatory effect of splicing factors on transcriptional elongation. Nature 414: 929–933. PubMed

Bieberstein NI, Carrillo Oesterreich F, Straube K, Neugebauer KM (2012) First exon length controls active chromatin signatures and transcription. Cell Rep 2: 62–68. PubMed

Faustino NA, Cooper TA (2003) Pre-mRNA splicing and human disease. Genes Dev 17: 419–437. PubMed

Park JW, Parisky K, Celotto AM, Reenan RA, Graveley BR (2004) Identification of alternative splicing regulators by RNA interference in Drosophila. Proc Natl Acad Sci USA 101: 15974–15979. PubMed PMC

Mordes D, Luo X, Kar A, Kuo D, Xu L, et al. (2006) Pre-mRNA splicing and retinitis pigmentosa. Mol Vis 12: 1259–1271. PubMed PMC

Moeller ME, Danielsen ET, Herder R, O'Connor MB, Rewitz KF (2013) Dynamic feedback circuits function as a switch for shaping a maturation– inducing steroid pulse in Drosophila. Development 140: 4730–4739. PubMed PMC

Hay BA, Maile R, Rubin GM (1997) P element insertion-dependent gene activation in the Drosophila eye. Proc Natl Acad Sci USA 94: 5195–5200. PubMed PMC

Du W, Xie JE, Dyson N (1996) Ectopic expression of dE2F and dDP induces cell proliferation and death in the Drosophila eye. EMBO J 15: 3684–3692. PubMed PMC

Duronio RJ, O'Farrell PH (1995) Developmental control of the G1 to S transition in Drosophila: cyclin E is a limiting downstream target of E2F. Genes Dev 9: 1456–1468. PubMed

Datar SA, Jacobs HW, la Cruz de AF, Lehner CF, Edgar BA (2000) The Drosophila cyclin D-Cdk4 complex promotes cellular growth. EMBO J 19: 4543–4554. PubMed PMC

Kittler R, Putz G, Pelletier L, Poser I, Heninger A-K, et al. (2004) An endoribonuclease-prepared siRNA screen in human cells identifies genes essential for cell division. Nature 432: 1036–1040. PubMed

Wood V, Gwilliam R, Rajandream M-A, Lyne M, Lyne R, et al. (2002) The genome sequence of Schizosaccharomyces pombe. Nature 415: 871–880. PubMed

Käufer NF, Potashkin J (2000) Analysis of the splicing machinery in fission yeast: a comparison with budding yeast and mammals. Nucleic Acids Res 28: 3003–3010. PubMed PMC

Kainou T, Shinzato T, Sasaki K, Mitsui Y, Giga-Hama Y, et al. (2006) Spsgt1, a new essential gene of Schizosaccharomyces pombe, is involved in carbohydrate metabolism. Yeast 23: 35–53. PubMed

Takaesu NT, Johnson AN, Newfeld SJ (2002) Posterior spiracle specific GAL4 lines: new reagents for developmental biology and respiratory physiology. Genesis 34: 16–18. PubMed

Uhlirova M, Jasper H, Bohmann D (2005) Non-cell-autonomous induction of tissue overgrowth by JNK/Ras cooperation in a Drosophila tumor model. Proc Natl Acad Sci USA 102: 13123–13128. PubMed PMC

Struhl G, Basler K (1993) Organizing activity of wingless protein in Drosophila. Cell 72: 527–540. PubMed

Sik Lee Y, Carthew RW (2003) Making a better RNAi vector for Drosophila: use of intron spacers. Methods 30: 322–329. PubMed

Steinfeldt T, Könen-Waisman S, Tong L, Pawlowski N, Lamkemeyer T, et al. (2010) Phosphorylation of mouse immunity-related GTPase (IRG) resistance proteins is an evasion strategy for virulent Toxoplasma gondii. PLoS Biol 8: e1000576. PubMed PMC

Rappsilber J, Mann M, Ishihama Y (2007) Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips. Nat Protoc 2: 1896–1906. PubMed

Perkins DN, Pappin DJ, Creasy DM, Cottrell JS (1999) Probability-based protein identification by searching sequence databases using mass spectrometry data. Electrophoresis 20: 3551–3567. PubMed

Külshammer E, Uhlirova M (2013) The actin cross-linker Filamin/Cheerio mediates tumor malignancy downstream of JNK signaling. J Cell Sci 126: 927–938. PubMed

Abràmoff MD, Magalhães PJ, Ram SJ (2004) Image processing with ImageJ. Biophotonics International 11: 36–42.

Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2(-ΔΔC(T)) Method. Methods 25: 402–408. PubMed

Larionov A, Krause A, Miller W (2005) A standard curve based method for relative real time PCR data processing. BMC Bioinformatics 6: 62. PubMed PMC

Ou Q, Magico A, King-Jones K (2011) Nuclear receptor DHR4 controls the timing of steroid hormone pulses during Drosophila development. PLoS Biol 9: e1001160. PubMed PMC

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