Morphological Identities of Two Different Marine Stramenopile Environmental Sequence Clades: Bicosoeca kenaiensis (Hilliard, 1971) and Cantina marsupialis (Larsen and Patterson, 1990) gen. nov., comb. nov
Jazyk angličtina Země Spojené státy americké Médium print-electronic
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
25594562
DOI
10.1111/jeu.12207
Knihovny.cz E-zdroje
- Klíčová slova
- Bicosoecid, MAST, biodiversity, culture-independent molecular methods, environmental DNA sequence surveys, molecular phylogeny, protist, ultrastructure,
- MeSH
- flagella ultrastruktura MeSH
- fylogeneze MeSH
- Heterokontophyta klasifikace cytologie genetika izolace a purifikace MeSH
- heterotrofní procesy MeSH
- molekulární sekvence - údaje MeSH
- mořská voda MeSH
- ribozomální DNA genetika MeSH
- RNA ribozomální 18S genetika MeSH
- sekvenční analýza DNA MeSH
- zvířata MeSH
- Check Tag
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Názvy látek
- ribozomální DNA MeSH
- RNA ribozomální 18S MeSH
Although environmental DNA surveys improve our understanding of biodiversity, interpretation of unidentified lineages is limited by the absence of associated morphological traits and living cultures. Unidentified lineages of marine stramenopiles are called "MAST clades". Twenty-five MAST clades have been recognized: MAST-1 through MAST-25; seven of these have been subsequently discarded because the sequences representing those clades were found to either (1) be chimeric or (2) affiliate within previously described taxonomic groups. Eighteen MAST clades remain without a cellular identity. Moreover, the discarded "MAST-13" has been used in different studies to refer to two different environmental sequence clades. After establishing four cultures representing two different species of heterotrophic stramenopiles and then characterizing their morphology and molecular phylogenetic positions, we determined that the two different species represented the two different MAST-13 clades: (1) a lorica-bearing Bicosoeca kenaiensis and (2) a microaerophilic flagellate previously named "Cafeteria marsupialis". Both species were previously described with only light microscopy; no cultures, ultrastructural data or DNA sequences were available from these species prior to this study. The molecular phylogenetic position of three different "C. marsupialis" isolates was not closely related to the type species of Cafeteria; therefore, we established a new genus for these isolates, Cantina gen. nov.
Department of Zoology Faculty of Science Charles University Prague Prague 128 44 Czech Republic
Japan Agency for Marine Earth Science and Technology Yokosuka Kanagawa 237 0061 Japan
Citace poskytuje Crossref.org
Integrated overview of stramenopile ecology, taxonomy, and heterotrophic origin
GENBANK
KM816645, KM816649