Inherited ichthyoses: molecular causes of the disease in Czech patients
Jazyk angličtina Země Anglie, Velká Británie Médium electronic
Typ dokumentu dopisy, práce podpořená grantem
Grantová podpora
TE02000058
Technology Agency of the Czech Republic - International
FNB RVO 65269705
Ministry of Health of the Czech Republic - International
LQ1601
CEITEC 2020 - International
GA16-11619S/2016
Grant Agency of the Czech Republic - International
PubMed
31046801
PubMed Central
PMC6498588
DOI
10.1186/s13023-019-1076-7
PII: 10.1186/s13023-019-1076-7
Knihovny.cz E-zdroje
- Klíčová slova
- 3D protein structure, Autosomal recessive congenital ichthyosis, In silico analysis, Keratinopathic ichthyosis,
- MeSH
- ABC transportéry genetika MeSH
- fenotyp MeSH
- genetická predispozice k nemoci genetika MeSH
- ichtyóza etiologie genetika MeSH
- lidé MeSH
- nesmyslný kodon genetika MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- dopisy MeSH
- práce podpořená grantem MeSH
- Geografické názvy
- Česká republika MeSH
- Názvy látek
- ABC transportéry MeSH
- ABCA12 protein, human MeSH Prohlížeč
- nesmyslný kodon MeSH
Inherited ichthyoses belong to a large and heterogeneous group of mendelian disorders of cornification, and can be distinguished by the quality and distribution of scaling and hyperkeratosis, by other dermatologic and extracutaneous involvement, and by inheritance. We present the genetic analysis results of probands with X-linked ichthyosis, autosomal recessive congenital ichthyosis, keratinopathic ichthyosis, and a patient with Netherton syndrome. Genetic diagnostics was complemented by in silico missense variant analysis based on 3D protein structures and commonly used prediction programs to compare the yields of these two approaches to each other. This analysis revealed various structural defects in proteins coded by mutated genes while no defects were associated with known polymorphisms. Two patients with pathogenic variants in the ABCA12 gene have a premature termination codon mutation on one allele and a silent variant on the second. The silent variants c.69G > A and c.4977G > A are localised in the last nucleotide of exon 1 and exon 32, respectively, and probably affect mRNA splicing. The phenotype of both patients is very severe, including a picture harlequin foetus after birth; later (at 3 and 6 years of age, respectively) ectropin, eclabion, generalised large polygonal scaling and erythema.
Department of Medical Genetics University Hospital Brno Jihlavská 20 625 00 Brno Czech Republic
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Oji V, Tadini G, Akiyama M, Blanchet Bardon C, Bodemer C, Bourrat E, et al. Revised nomenclature and classification of inherited ichthyoses: results of the first ichthyosis consensus conference in Soreze 2009. J Am Acad Dermatol. 2010;63:607–641. doi: 10.1016/j.jaad.2009.11.020. PubMed DOI
Buckova H, Noskova H, Borska R, Reblova K, Pinkova B, Zapletalova E, et al. Autosomal recessive congenital ichthyoses in the Czech Republic. Br J Dermatol. 2016;174:405–407. doi: 10.1111/bjd.13918. PubMed DOI
Akiyama M. ABCA12 mutations and autosomal recessive congenital ichthyosis: a review of genotype/phenotype correlations and of pathogenetic concepts. Hum Mutat. 2010;31:1090–1096. doi: 10.1002/humu.21326. PubMed DOI
Reblova K, Hruba Z, Prochazkova D, Pazdirkova R, Pouchla S, Zeman J, et al. Hyperphenylalaninemia in the Czech Republic: genotype-phenotype correlations and in silico analysis of novel missense mutations. Clin Chim Acta. 2013;419:1–10. doi: 10.1016/j.cca.2013.01.006. PubMed DOI
Skalova D, Zidkova J, Vohanka S, Mazanec R, Musova Z, Vondracek P, et al. CLCN1 mutations in Czech patients with myotonia congenita, in silico analysis of novel and known mutations in the human dimeric skeletal muscle chloride channel. PLoS One. 2013;8:e82549. doi: 10.1371/journal.pone.0082549. PubMed DOI PMC
Reblova K, Kulhanek P, Fajkusova L. Computational study of missense mutations in phenylalanine hydroxylase. J Mol Model. 2015;21:70. doi: 10.1007/s00894-015-2620-6. PubMed DOI
Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, et al. Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology. Genet Med. 2015;17:405–424. doi: 10.1038/gim.2015.30. PubMed DOI PMC