Genomes of Galápagos Mockingbirds Reveal the Impact of Island Size and Past Demography on Inbreeding and Genetic Load in Contemporary Populations
Language English Country England, Great Britain Media print-electronic
Document type Journal Article
PubMed
39912126
PubMed Central
PMC11842953
DOI
10.1111/mec.17665
Knihovny.cz E-resources
- Keywords
- conservation genetics, demographic inference, genetic diversity, genetic load,
- MeSH
- Genetic Load * MeSH
- Genome * MeSH
- Genotype MeSH
- Population Density MeSH
- Inbreeding * MeSH
- Islands MeSH
- Passeriformes * genetics MeSH
- Genetics, Population * MeSH
- Conservation of Natural Resources MeSH
- Animals MeSH
- Check Tag
- Animals MeSH
- Publication type
- Journal Article MeSH
- Geographicals
- Ecuador MeSH
- Islands MeSH
Restricted range size brings about noteworthy genetic consequences that may affect the viability of a population and eventually its extinction. Particularly, the question if an increase in inbreeding can avert the accumulation of genetic load via purging is hotly debated in the conservation genetic field. Insular populations with limited range sizes represent an ideal setup for relating range size to these genetic factors. Leveraging a set of eight differently sized populations of Galápagos mockingbirds (Mimus), we investigated how island size shaped effective population size (Ne), inbreeding and genetic load. We assembled a genome of M. melanotis and genotyped three individuals per population by whole-genome resequencing. Demographic inference showed that the Ne of most populations remained high after the colonisation of the archipelago 1-2 Mya. Ne decline in M. parvulus happened only 10-20 Kya, whereas the critically endangered M. trifasciatus showed a longer history of reduced Ne. Despite these historical fluctuations, the current island size determines Ne in a linear fashion. In contrast, significant inbreeding coefficients, derived from runs of homozygosity, were identified only in the four smallest populations. The index of additive genetic load suggested purging in M. parvulus, where the smallest populations showed the lowest load. By contrast, M. trifasciatus carried the highest genetic load, possibly due to a recent rapid bottleneck. Overall, our study demonstrates a complex effect of demography on inbreeding and genetic load, providing implications in conservation genetics in general and in a conservation project of M. trifasciatus in particular.
Agriculture and Agri Food Canada Saskatoon Canada
Department of Biology San Francisco State University San Francisco California USA
Department of Biology University of Miami Coral Gables Florida USA
Department of Biology University of Saskatchewan Saskatoon Canada
Department of Botany Faculty of Science Charles University Prague Czech Republic
Facultad de Medicina Pontificia Universidad Católica del Ecuador Quito Ecuador
Faculty of Science University of South Bohemia České Budějovice Czech Republic
Galapagos Science Center Universidad San Francisco de Quito Quito Ecuador
Institute of Parasitology Biology Centre CAS České Budějovice Czech Republic
School of Natural Sciences Ecology and Conservation Lab Massey University Auckland New Zealand
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