The Eurasian beaver (Castor fiber) is an expanding species in Europe in recent decades due to reintroductions and natural population growth. Beavers expanded rapidly in the second half of the 20th century, and their expansion was particularly rapid in the Danube basin. Nowadays, the majority of the continuous population located in the central and eastern parts of the continent and a large disjunct population in Norway and Sweden. Despite the increasing population size, the role of the beaver as a source of waterborne pathogens is not firmly established or is often inferred from circumstantial data. In order to extend knowledge about the composition of the parasite fauna of beavers occurring in Slovakia, 21 faecal samples taken near their burrows from three sites (located in the Topľa, Poprad and Danube river basin) were examined microscopically and by polymerase chain reaction (PCR). PCR-positive specimens were further examined by DNA sequencing. Parasites were detected in 21% of the examined beavers, specifically the protozoa Cryptosporidium spp. (n = 2), Blastocystis sp. (n = 1), and microsporidia Enterocytozoon bieneusi (n = 1) and Encephalitozoon spp. (n = 1). Using the sequence analysis, two variants of Cryptosporidium proliferans, a new subtype of Blastocystis sp., genotype D of E. bieneusi and Encephalitozoon intestinalis were identified. A putatively novel Blastocystis subtype (ST), originated from a site near the Danube river (southwestern Slovakia), was proposed based on high genetic divergence from the closest described subtype ST12 (11.9%) and unique phylogenetic position in a clade composed of ST's 35-38. The increased risk of zoonotic transmission or transmission to other animals was particularly evident in the site near the Topľa river (northeastern Slovakia), where fungal spores of zoonotic genotype D of E. bieneusi and E. intestinalis, together with oocysts of the potentially zoonotic C. proliferans, were found.

• Keywords
• Gastrointestinal parasites, Molecular analysis, Protected animals, Protozoan, Rodents, Zoonoses,
• Publication type
• Journal Article MeSH

Cryptosporidium spp. are common protozoan pathogens in mammals. With pet rodents being integrated into modern life, the potential roles of them in transmitting parasites to humans need assessments. In the present study, we examined the occurrence of Cryptosporidium spp. in pet rodents in Guangdong, south China. A total of 697 fecal samples were collected from 11 species of rodents in seven pet shops, one pet market and one farm. Cryptosporidium spp. were identified by PCR analysis of the small subunit rRNA gene. An overall infection rate of 36.9% (257/697) was obtained, with infection rates varying from 9.3% in chinchillas, 52.3% in guinea pigs, 57.1% in squirrels, to 68.4% in cricetid animals. Nine Cryptosporidium species and genotypes were identified, including C. wrairi (in 129 guinea pigs), C. andersoni (in 34 hamsters), C. homai (in 32 guinea pigs), Cryptosporidium hamster genotype (in 30 hamsters), C. ubiquitum (in 24 chinchillas and squirrels), C. parvum (in 2 chinchillas), Cryptosporidium ferret genotype (in 2 chipmunks), C. muris (in 1 hamster and 1 guinea pig), and Cryptosporidium chipmunk genotype V (in 1 chinchilla and 1 chipmunk). Sequence analysis of the 60 kDa glycoprotein gene identified three subtype families of C. ubiquitum, including family XIId in 15 chinchillas, XIIa in 5 chinchillas, and a new subtype family (XIIi) in 1 squirrel. The identification of C. parvum and C. ubiquitum in pet rodents suggests that these animals, especially chinchillas, could serve as reservoirs of human-pathogenic Cryptosporidium spp. Hygiene should be practiced in the rear and care of these animals, and One Health measures should be developed to reduce the occurrence of zoonotic Cryptosporidium infections due to contact with pet rodents.

• Keywords
• Cryptosporidium, Molecular epidemiology, One health, Pet rodents, Zoonosis,
• Publication type
• Journal Article MeSH

Cryptosporidium spp. are common protozoan pathogens in mammals. The diversity and biology of Cryptosporidium in tree squirrels are not well studied. A total of 258 Eurasian red squirrels (Sciurus vulgaris) from 25 and 15 locations in the Czech Republic and Slovakia, respectively, were examined for Cryptosporidium spp. oocysts and specific DNA at the SSU, actin, HSP70, TRAP-C1, COWP, and gp60 loci. Out of 26 positive animals, only juveniles (9/12) were microscopically positive (18,000 to 72,000 OPG), and molecular analyses revealed the presence of Cryptosporidium sp. ferret genotype in all specimens. Oocysts obtained from naturally-infected squirrels measured 5.54-5.22 μm and were not infectious for laboratory mice (BALB/c and SCID), Mongolian gerbils, Guinea pigs, Southern multimammate mice, chickens, or budgerigars. None of naturally infected squirrels showed clinical signs of disease. The frequency of occurrence of the ferret genotype in squirrels did not vary statistically based on host age, gender or country of capture. Phylogenetic analysis of sequences from six loci revealed that Cryptosporidium sp. ferret genotype is genetically distinct from the currently accepted Cryptosporidium species. Morphological and biological data from this and previous studies support the establishment of Cryptosporidium sp. ferret genotype as a new species, Cryptosporidium sciurinum n. sp.

• Keywords
• Cryptosporidium sp. ferret genotype, biology, course of infection, infectivity, occurrence, oocyst size, phylogeny,
• Publication type
• Journal Article MeSH

Cryptosporidium spp., common parasites of vertebrates, remain poorly studied in wildlife. This study describes the novel Cryptosporidium species adapted to nutrias (Myocastor coypus). A total of 150 faecal samples of feral nutria were collected from locations in the Czech Republic and Slovakia and examined for Cryptosporidium spp. oocysts and specific DNA at the SSU, actin, HSP70, and gp60 loci. Molecular analyses revealed the presence of C. parvum (n = 1), C. ubiquitum subtype family XIId (n = 5) and Cryptosporidium myocastoris n. sp. XXIIa (n = 2), and XXIIb (n = 3). Only nutrias positive for C. myocastoris shed microscopically detectable oocysts, which measured 4.8-5.2 × 4.7-5.0 µm, and oocysts were infectious for experimentally infected nutrias with a prepatent period of 5-6 days, although not for mice, gerbils, or chickens. The infection was localised in jejunum and ileum without observable macroscopic changes. The microvilli adjacent to attached stages responded by elongating. Clinical signs were not observed in naturally or experimentally infected nutrias. Phylogenetic analyses at SSU, actin, and HSP70 loci demonstrated that C. myocastoris n. sp. is distinct from other valid Cryptosporidium species.

• Keywords
• adaptation, biology, course of infection, infectivity, oocyst size, parasite, phylogeny, prevalence,
• Publication type
• Journal Article MeSH

The diversity and biology of Cryptosporidium that is specific for rats (Rattus spp.) are not well studied. We examined the occurrence and genetic diversity of Cryptosporidium spp. in wild brown rats (Rattus norvegicus) by microscopy and polymerase chain reaction (PCR)/sequencing targeting the small subunit rDNA (SSU), actin and HSP70 genes. Out of 343 faecal samples tested, none were positive by microscopy and 55 were positive by PCR. Sequence analysis of SSU gene revealed the presence of Cryptosporidium muris (n = 4), C. andersoni (n = 3), C. ryanae (n = 1), C. occultus (n = 3), Cryptosporidium rat genotype I (n = 23), Cryptosporidium rat genotype IV (n = 16) and novel Cryptosporidium rat genotype V (n = 5). Spherical oocysts of Cryptosporidium rat genotype I obtained from naturally-infected rats, measuring 4.4-5.4 μm × 4.3-5.1 μm, were infectious to the laboratory rats, but not to the BALB/c mice (Mus musculus) nor Mongolian gerbils (Meriones unguiculatus). The prepatent period was 3 days post infection and the patent period was longer than 30 days. Naturally- and experimentally-infected rats showed no clinical signs of disease. Percentage of nucleotide similarities at the SSU, actin, HSP70 loci between C. ratti n. sp. and the rat derived C. occultus and Cryptosporidium rat genotype II, III, IV, and V ranged from 91.0 to 98.1%. These genetic variations were similar or greater than that observed between closely related species, i.e. C. parvum and C. erinacei (93.2-99.5%). Our morphological, genetic and biological data support the establishment of Cryptosporidium rat genotype I as a new species, Cryptosporidium ratti n. sp.

• Keywords
• Cryptosporidium ratti, infectivity, morphometric analysis, phylogeny, prevalence,
• MeSH
• Actins genetics   MeSH
• Cryptosporidium * classification   genetics   isolation & purification   MeSH
• Animals, Wild parasitology   MeSH
• Feces parasitology   MeSH
• Phylogeny MeSH
• Genetic Variation MeSH
• Classification MeSH
• Rats parasitology   MeSH
• Mice MeSH
• Prevalence MeSH
• HSP70 Heat-Shock Proteins genetics   MeSH
• DNA, Protozoan MeSH
• DNA, Ribosomal genetics   MeSH
• Animals MeSH
• Check Tag
• Rats parasitology   MeSH
• Mice MeSH
• Animals MeSH
• Publication type
• Journal Article MeSH
• Research Support, Non-U.S. Gov't MeSH
• Names of Substances
• Actins MeSH
• HSP70 Heat-Shock Proteins MeSH
• DNA, Protozoan MeSH
• DNA, Ribosomal MeSH