-
Je něco špatně v tomto záznamu ?
Diversification of fasting regulated transcription in a cluster of duplicated nuclear hormone receptors in C. elegans
J. Vohanka, K. Simecková, E. Machalová, F. Behenský, MW. Krause, Z. Kostrouch, M. Kostrouchová,
Jazyk angličtina Země Nizozemsko
Typ dokumentu časopisecké články, práce podpořená grantem
- MeSH
- Caenorhabditis elegans genetika metabolismus fyziologie MeSH
- chromozomy MeSH
- duplicitní geny MeSH
- genetická transkripce fyziologie MeSH
- genetická variace fyziologie MeSH
- genom u helmintů MeSH
- hmyz genetika metabolismus MeSH
- lidé MeSH
- molekulární sekvence - údaje MeSH
- multigenová rodina genetika MeSH
- omezení příjmu potravy metabolismus fyziologie MeSH
- receptory cytoplazmatické a nukleární genetika metabolismus MeSH
- savci genetika metabolismus MeSH
- sekvence aminokyselin MeSH
- sekvenční homologie aminokyselin MeSH
- vývojová regulace genové exprese MeSH
- zvířata MeSH
- Check Tag
- lidé MeSH
- mužské pohlaví MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
The genome of Caenorhabditis elegans encodes more than 280 nuclear hormone receptors (NHRs) in contrast to the 48 NHRs in humans and 18 NHRs in Drosophila. The majority of the C. elegans NHRs are categorized as supplementary nuclear receptors (supnrs) that evolved by successive duplications of a single ancestral gene. The evolutionary pressures that lead to the expansion of NHRs in nematodes, as well as the function of the majority of supnrs, are not known. Here, we have studied the expression of seven genes organized in a cluster on chromosome V: nhr-206, nhr-208, nhr-207, nhr-209, nhr-154, nhr-153 and nhr-136. Reverse transcription-quantitative PCR and analyses using transgenic lines carrying GFP fusion genes with their putative promoters revealed that all seven genes of this cluster are expressed and five have partially overlapping expression patterns including in the pharynx, intestine, certain neurons, the anal sphincter muscle, and male specific cells. Four genes in this cluster are conserved between C. elegans and Caenorhabditis briggsae whereas three genes are present only in C. elegans, the apparent result of a relatively recent expansion. Interestingly, we find that a subset of the conserved and non-conserved genes in this cluster respond transcriptionally to fasting in tissue-specific patterns. Our results reveal the diversification of the temporal, spatial, and metabolic gene expression patterns coupled with evolutionary drift within supnr family members.
Citace poskytuje Crossref.org
- 000
- 00000naa a2200000 a 4500
- 001
- bmc12026394
- 003
- CZ-PrNML
- 005
- 20121207103321.0
- 007
- ta
- 008
- 120817e20100510ne f 000 0#eng||
- 009
- AR
- 024 7_
- $a 10.1016/j.gep.2010.05.001 $2 doi
- 035 __
- $a (PubMed)20460175
- 040 __
- $a ABA008 $b cze $d ABA008 $e AACR2
- 041 0_
- $a eng
- 044 __
- $a ne
- 100 1_
- $a Vohanka, Jaroslav $u Laboratory of Molecular Biology and Genetics, Institute of Inherited Metabolic Disorders, First Faculty of Medicine, Charles University, Prague, Czech Republic.
- 245 10
- $a Diversification of fasting regulated transcription in a cluster of duplicated nuclear hormone receptors in C. elegans / $c J. Vohanka, K. Simecková, E. Machalová, F. Behenský, MW. Krause, Z. Kostrouch, M. Kostrouchová,
- 520 9_
- $a The genome of Caenorhabditis elegans encodes more than 280 nuclear hormone receptors (NHRs) in contrast to the 48 NHRs in humans and 18 NHRs in Drosophila. The majority of the C. elegans NHRs are categorized as supplementary nuclear receptors (supnrs) that evolved by successive duplications of a single ancestral gene. The evolutionary pressures that lead to the expansion of NHRs in nematodes, as well as the function of the majority of supnrs, are not known. Here, we have studied the expression of seven genes organized in a cluster on chromosome V: nhr-206, nhr-208, nhr-207, nhr-209, nhr-154, nhr-153 and nhr-136. Reverse transcription-quantitative PCR and analyses using transgenic lines carrying GFP fusion genes with their putative promoters revealed that all seven genes of this cluster are expressed and five have partially overlapping expression patterns including in the pharynx, intestine, certain neurons, the anal sphincter muscle, and male specific cells. Four genes in this cluster are conserved between C. elegans and Caenorhabditis briggsae whereas three genes are present only in C. elegans, the apparent result of a relatively recent expansion. Interestingly, we find that a subset of the conserved and non-conserved genes in this cluster respond transcriptionally to fasting in tissue-specific patterns. Our results reveal the diversification of the temporal, spatial, and metabolic gene expression patterns coupled with evolutionary drift within supnr family members.
- 650 _2
- $a sekvence aminokyselin $7 D000595
- 650 _2
- $a zvířata $7 D000818
- 650 _2
- $a Caenorhabditis elegans $x genetika $x metabolismus $x fyziologie $7 D017173
- 650 _2
- $a chromozomy $7 D002875
- 650 _2
- $a omezení příjmu potravy $x metabolismus $x fyziologie $7 D005215
- 650 _2
- $a vývojová regulace genové exprese $7 D018507
- 650 _2
- $a duplicitní geny $7 D020131
- 650 _2
- $a genetická variace $x fyziologie $7 D014644
- 650 _2
- $a genom u helmintů $7 D049751
- 650 _2
- $a lidé $7 D006801
- 650 _2
- $a hmyz $x genetika $x metabolismus $7 D007313
- 650 _2
- $a mužské pohlaví $7 D008297
- 650 _2
- $a savci $x genetika $x metabolismus $7 D008322
- 650 _2
- $a molekulární sekvence - údaje $7 D008969
- 650 _2
- $a multigenová rodina $x genetika $7 D005810
- 650 _2
- $a receptory cytoplazmatické a nukleární $x genetika $x metabolismus $7 D018160
- 650 _2
- $a sekvenční homologie aminokyselin $7 D017386
- 650 _2
- $a genetická transkripce $x fyziologie $7 D014158
- 655 _2
- $a časopisecké články $7 D016428
- 655 _2
- $a práce podpořená grantem $7 D013485
- 700 1_
- $a Simecková, Katerina
- 700 1_
- $a Machalová, Eliska
- 700 1_
- $a Behenský, Frantisek
- 700 1_
- $a Krause, Michael W
- 700 1_
- $a Kostrouch, Zdenek
- 700 1_
- $a Kostrouchová, Marta
- 773 0_
- $w MED00008325 $t Gene expression patterns : GEP $x 1872-7298 $g Roč. 10, č. 6 (20100510), s. 227-36
- 856 41
- $u https://pubmed.ncbi.nlm.nih.gov/20460175 $y Pubmed
- 910 __
- $a ABA008 $b sig $c sign $y m
- 990 __
- $a 20120817 $b ABA008
- 991 __
- $a 20121207103355 $b ABA008
- 999 __
- $a ok $b bmc $g 948436 $s 783740
- BAS __
- $a 3
- BAS __
- $a PreBMC
- BMC __
- $a 2010 $b 10 $c 6 $d 227-36 $e 20100510 $i 1872-7298 $m Gene expression patterns $n Gene Expr Patterns $x MED00008325
- LZP __
- $a Pubmed-20120817/10/04