Detail
Article
Online article
FT
Medvik - BMC
  • Something wrong with this record ?

Genomic study of the Ket: a Paleo-Eskimo-related ethnic group with significant ancient North Eurasian ancestry

P. Flegontov, P. Changmai, A. Zidkova, MD. Logacheva, NE. Altınışık, O. Flegontova, MS. Gelfand, ES. Gerasimov, EE. Khrameeva, OP. Konovalova, T. Neretina, YV. Nikolsky, G. Starostin, VV. Stepanova, IV. Travinsky, M. Tříska, P. Tříska, TV. Tatarinova,

. 2016 ; 6 (-) : 20768. [pub] 20160211

Language English Country England, Great Britain

Document type Journal Article, Research Support, N.I.H., Extramural, Research Support, Non-U.S. Gov't

The Kets, an ethnic group in the Yenisei River basin, Russia, are considered the last nomadic hunter-gatherers of Siberia, and Ket language has no transparent affiliation with any language family. We investigated connections between the Kets and Siberian and North American populations, with emphasis on the Mal'ta and Paleo-Eskimo ancient genomes, using original data from 46 unrelated samples of Kets and 42 samples of their neighboring ethnic groups (Uralic-speaking Nganasans, Enets, and Selkups). We genotyped over 130,000 autosomal SNPs, identified mitochondrial and Y-chromosomal haplogroups, and performed high-coverage genome sequencing of two Ket individuals. We established that Nganasans, Kets, Selkups, and Yukaghirs form a cluster of populations most closely related to Paleo-Eskimos in Siberia (not considering indigenous populations of Chukotka and Kamchatka). Kets are closely related to modern Selkups and to some Bronze and Iron Age populations of the Altai region, with all these groups sharing a high degree of Mal'ta ancestry. Implications of these findings for the linguistic hypothesis uniting Ket and Na-Dene languages into a language macrofamily are discussed.

A A Kharkevich Institute for Information Transmission Problems Russian Academy of Sciences Moscow Russia Belozersky Institute of Physico Chemical Biology Lomonosov Moscow State University Moscow Russia

A A Kharkevich Institute for Information Transmission Problems Russian Academy of Sciences Moscow Russia Belozersky Institute of Physico Chemical Biology Lomonosov Moscow State University Moscow Russia Pirogov Russian National Research Medical University Moscow Russia

A A Kharkevich Institute for Information Transmission Problems Russian Academy of Sciences Moscow Russia Children's Hospital Los Angeles Los Angeles CA USA Spatial Sciences Institute University of Southern California Los Angeles CA USA

A A Kharkevich Institute for Information Transmission Problems Russian Academy of Sciences Moscow Russia Faculty of Bioengineering and Bioinformatics Lomonosov Moscow State University Moscow Russia

A A Kharkevich Institute for Information Transmission Problems Russian Academy of Sciences Moscow Russia Skolkovo Institute of Science and Technology Skolkovo Russia

Belozersky Institute of Physico Chemical Biology Lomonosov Moscow State University Moscow Russia

Biomedical Cluster Skolkovo Foundation Skolkovo Russia George Mason University Fairfax VA USA

Children's Hospital Los Angeles Los Angeles CA USA

Department of Biology and Ecology Faculty of Science University of Ostrava Ostrava Czech Republic

Department of Biology and Ecology Faculty of Science University of Ostrava Ostrava Czech Republic A A Kharkevich Institute for Information Transmission Problems Russian Academy of Sciences Moscow Russia Institute of Parasitology Biology Centre Czech Academy of Sciences České Budĕjovice Czech Republic

Institute of Parasitology Biology Centre Czech Academy of Sciences České Budĕjovice Czech Republic

Instituto de Patologia e Imunologia Molecular da Universidade do Porto Porto Portugal

Retired Moscow Russia

Russian State University for the Humanities Moscow Russia Russian Presidential Academy Moscow Russia

References provided by Crossref.org

000      
00000naa a2200000 a 4500
001      
bmc17000489
003      
CZ-PrNML
005      
20170103132033.0
007      
ta
008      
170103s2016 enk f 000 0|eng||
009      
AR
024    7_
$a 10.1038/srep20768 $2 doi
024    7_
$a 10.1038/srep20768 $2 doi
035    __
$a (PubMed)26865217
040    __
$a ABA008 $b cze $d ABA008 $e AACR2
041    0_
$a eng
044    __
$a enk
100    1_
$a Flegontov, Pavel $u Department of Biology and Ecology, Faculty of Science, University of Ostrava, Ostrava, Czech Republic. A.A. Kharkevich Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, Russia. Institute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budĕjovice, Czech Republic.
245    10
$a Genomic study of the Ket: a Paleo-Eskimo-related ethnic group with significant ancient North Eurasian ancestry / $c P. Flegontov, P. Changmai, A. Zidkova, MD. Logacheva, NE. Altınışık, O. Flegontova, MS. Gelfand, ES. Gerasimov, EE. Khrameeva, OP. Konovalova, T. Neretina, YV. Nikolsky, G. Starostin, VV. Stepanova, IV. Travinsky, M. Tříska, P. Tříska, TV. Tatarinova,
520    9_
$a The Kets, an ethnic group in the Yenisei River basin, Russia, are considered the last nomadic hunter-gatherers of Siberia, and Ket language has no transparent affiliation with any language family. We investigated connections between the Kets and Siberian and North American populations, with emphasis on the Mal'ta and Paleo-Eskimo ancient genomes, using original data from 46 unrelated samples of Kets and 42 samples of their neighboring ethnic groups (Uralic-speaking Nganasans, Enets, and Selkups). We genotyped over 130,000 autosomal SNPs, identified mitochondrial and Y-chromosomal haplogroups, and performed high-coverage genome sequencing of two Ket individuals. We established that Nganasans, Kets, Selkups, and Yukaghirs form a cluster of populations most closely related to Paleo-Eskimos in Siberia (not considering indigenous populations of Chukotka and Kamchatka). Kets are closely related to modern Selkups and to some Bronze and Iron Age populations of the Altai region, with all these groups sharing a high degree of Mal'ta ancestry. Implications of these findings for the linguistic hypothesis uniting Ket and Na-Dene languages into a language macrofamily are discussed.
650    _2
$a lidský chromozom Y $7 D041322
650    _2
$a mitochondriální DNA $x genetika $7 D004272
650    _2
$a etnicita $x genetika $7 D005006
650    _2
$a genetická variace $7 D014644
650    12
$a genom lidský $7 D015894
650    _2
$a haplotypy $7 D006239
650    _2
$a migrace lidstva $7 D063426
650    _2
$a lidé $7 D006801
650    _2
$a Inuité $x genetika $7 D004930
650    _2
$a jazyk (prostředek komunikace) $7 D007802
650    12
$a fylogeneze $7 D010802
650    _2
$a fylogeografie $7 D058974
650    12
$a jednonukleotidový polymorfismus $7 D020641
650    _2
$a Sibiř $7 D012800
655    _2
$a časopisecké články $7 D016428
655    _2
$a Research Support, N.I.H., Extramural $7 D052061
655    _2
$a práce podpořená grantem $7 D013485
700    1_
$a Changmai, Piya $u Department of Biology and Ecology, Faculty of Science, University of Ostrava, Ostrava, Czech Republic.
700    1_
$a Zidkova, Anastassiya $u Department of Biology and Ecology, Faculty of Science, University of Ostrava, Ostrava, Czech Republic.
700    1_
$a Logacheva, Maria D $u A.A. Kharkevich Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, Russia. Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia. Pirogov Russian National Research Medical University, Moscow, Russia.
700    1_
$a Altınışık, N Ezgi $u Department of Biology and Ecology, Faculty of Science, University of Ostrava, Ostrava, Czech Republic. $7 gn_A_00004960
700    1_
$a Flegontova, Olga $u Institute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budĕjovice, Czech Republic.
700    1_
$a Gelfand, Mikhail S $u A.A. Kharkevich Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, Russia. Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia.
700    1_
$a Gerasimov, Evgeny S $u A.A. Kharkevich Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, Russia. Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia.
700    1_
$a Khrameeva, Ekaterina E $u A.A. Kharkevich Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, Russia. Skolkovo Institute of Science and Technology, Skolkovo, Russia.
700    1_
$a Konovalova, Olga P $u Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia.
700    1_
$a Neretina, Tatiana $u Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia.
700    1_
$a Nikolsky, Yuri V $u Biomedical Cluster, Skolkovo Foundation, Skolkovo, Russia. George Mason University, Fairfax, VA, USA.
700    1_
$a Starostin, George $u Russian State University for the Humanities, Moscow, Russia. Russian Presidential Academy (RANEPA), Moscow, Russia.
700    1_
$a Stepanova, Vita V $u A.A. Kharkevich Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, Russia. Skolkovo Institute of Science and Technology, Skolkovo, Russia.
700    1_
$a Travinsky, Igor V $u Retired, Moscow, Russia.
700    1_
$a Tříska, Martin $u Children's Hospital Los Angeles, Los Angeles, CA, USA.
700    1_
$a Tříska, Petr $u Instituto de Patologia e Imunologia Molecular da Universidade do Porto (IPATIMUP), Porto, Portugal. Instituto de Ciências Biomédicas da Universidade do Porto (ICBAS), Porto, Portugal.
700    1_
$a Tatarinova, Tatiana V $u A.A. Kharkevich Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, Russia. Children's Hospital Los Angeles, Los Angeles, CA, USA. Spatial Sciences Institute, University of Southern California, Los Angeles, CA, USA.
773    0_
$w MED00182195 $t Scientific reports $x 2045-2322 $g Roč. 6, č. - (2016), s. 20768
856    41
$u https://pubmed.ncbi.nlm.nih.gov/26865217 $y Pubmed
910    __
$a ABA008 $b sig $c sign $y a $z 0
990    __
$a 20170103 $b ABA008
991    __
$a 20170103132121 $b ABA008
999    __
$a ok $b bmc $g 1179629 $s 961056
BAS    __
$a 3
BAS    __
$a PreBMC
BMC    __
$a 2016 $b 6 $c - $d 20768 $e 20160211 $i 2045-2322 $m Scientific reports $n Sci Rep $x MED00182195
LZP    __
$a Pubmed-20170103

Find record

Citation metrics

Logged in users only

Archiving options

Loading data ...