-
Je něco špatně v tomto záznamu ?
Ecological plant epigenetics: Evidence from model and non-model species, and the way forward
CL. Richards, C. Alonso, C. Becker, O. Bossdorf, E. Bucher, M. Colomé-Tatché, W. Durka, J. Engelhardt, B. Gaspar, A. Gogol-Döring, I. Grosse, TP. van Gurp, K. Heer, I. Kronholm, C. Lampei, V. Latzel, M. Mirouze, L. Opgenoorth, O. Paun, SJ....
Jazyk angličtina Země Anglie, Velká Británie
Typ dokumentu časopisecké články, přehledy
PubMed
29027325
DOI
10.1111/ele.12858
Knihovny.cz E-zdroje
- MeSH
- ekologie * MeSH
- ekosystém MeSH
- epigeneze genetická * MeSH
- metylace DNA MeSH
- rostliny * MeSH
- Publikační typ
- časopisecké články MeSH
- přehledy MeSH
Growing evidence shows that epigenetic mechanisms contribute to complex traits, with implications across many fields of biology. In plant ecology, recent studies have attempted to merge ecological experiments with epigenetic analyses to elucidate the contribution of epigenetics to plant phenotypes, stress responses, adaptation to habitat, and range distributions. While there has been some progress in revealing the role of epigenetics in ecological processes, studies with non-model species have so far been limited to describing broad patterns based on anonymous markers of DNA methylation. In contrast, studies with model species have benefited from powerful genomic resources, which contribute to a more mechanistic understanding but have limited ecological realism. Understanding the significance of epigenetics for plant ecology requires increased transfer of knowledge and methods from model species research to genomes of evolutionarily divergent species, and examination of responses to complex natural environments at a more mechanistic level. This requires transforming genomics tools specifically for studying non-model species, which is challenging given the large and often polyploid genomes of plants. Collaboration among molecular geneticists, ecologists and bioinformaticians promises to enhance our understanding of the mutual links between genome function and ecological processes.
Conservation Biology Philipps University of Marburg 35037 Marburg Germany
Department of Ecology Philipps University Marburg 35037 Marburg Germany
Department of Integrative Biology University of South Florida Tampa FL 33620 USA
Estación Biológica de Doñana CSIC 41092 Sevilla Spain
Institut de Recherche en Horticulture et Semences 49071 Beaucouzé Cedex France
Institut für Informatik University of Leipzig 04107 Leipzig Germany
Institute of Botany The Czech Academy of Sciences 25243 Průhonice Czech Republic
Institute of Plant Breeding Seed Science and Population Genetics 70599 Stuttgart Germany
Netherlands Institute of Ecology Wageningen The Netherlands
Plant Cell Biology Philipps University Marburg 35037 Marburg Germany
Plant Ecological Genomics University of Vienna 1030 Vienna Austria
Plant Evolutionary Ecology University of Tübingen 72076 Tübingen Germany
Citace poskytuje Crossref.org
- 000
- 00000naa a2200000 a 4500
- 001
- bmc19013057
- 003
- CZ-PrNML
- 005
- 20190411110107.0
- 007
- ta
- 008
- 190405s2017 enk f 000 0|eng||
- 009
- AR
- 024 7_
- $a 10.1111/ele.12858 $2 doi
- 035 __
- $a (PubMed)29027325
- 040 __
- $a ABA008 $b cze $d ABA008 $e AACR2
- 041 0_
- $a eng
- 044 __
- $a enk
- 100 1_
- $a Richards, Christina L $u Department of Integrative Biology, University of South Florida, Tampa, FL, 33620, USA.
- 245 10
- $a Ecological plant epigenetics: Evidence from model and non-model species, and the way forward / $c CL. Richards, C. Alonso, C. Becker, O. Bossdorf, E. Bucher, M. Colomé-Tatché, W. Durka, J. Engelhardt, B. Gaspar, A. Gogol-Döring, I. Grosse, TP. van Gurp, K. Heer, I. Kronholm, C. Lampei, V. Latzel, M. Mirouze, L. Opgenoorth, O. Paun, SJ. Prohaska, SA. Rensing, PF. Stadler, E. Trucchi, K. Ullrich, KJF. Verhoeven,
- 520 9_
- $a Growing evidence shows that epigenetic mechanisms contribute to complex traits, with implications across many fields of biology. In plant ecology, recent studies have attempted to merge ecological experiments with epigenetic analyses to elucidate the contribution of epigenetics to plant phenotypes, stress responses, adaptation to habitat, and range distributions. While there has been some progress in revealing the role of epigenetics in ecological processes, studies with non-model species have so far been limited to describing broad patterns based on anonymous markers of DNA methylation. In contrast, studies with model species have benefited from powerful genomic resources, which contribute to a more mechanistic understanding but have limited ecological realism. Understanding the significance of epigenetics for plant ecology requires increased transfer of knowledge and methods from model species research to genomes of evolutionarily divergent species, and examination of responses to complex natural environments at a more mechanistic level. This requires transforming genomics tools specifically for studying non-model species, which is challenging given the large and often polyploid genomes of plants. Collaboration among molecular geneticists, ecologists and bioinformaticians promises to enhance our understanding of the mutual links between genome function and ecological processes.
- 650 _2
- $a metylace DNA $7 D019175
- 650 12
- $a ekologie $7 D004463
- 650 _2
- $a ekosystém $7 D017753
- 650 12
- $a epigeneze genetická $7 D044127
- 650 12
- $a rostliny $7 D010944
- 655 _2
- $a časopisecké články $7 D016428
- 655 _2
- $a přehledy $7 D016454
- 700 1_
- $a Alonso, Conchita $u Estación Biológica de Doñana, CSIC, 41092, Sevilla, Spain.
- 700 1_
- $a Becker, Claude $u Gregor Mendel Institute of Molecular Plant Biology, 1030, Vienna, Austrian Academy of Sciences, Vienna Biocenter (VBC), Austria.
- 700 1_
- $a Bossdorf, Oliver $u Plant Evolutionary Ecology, University of Tübingen, 72076, Tübingen, Germany.
- 700 1_
- $a Bucher, Etienne $u Institut de Recherche en Horticulture et Semences, 49071, Beaucouzé Cedex, France.
- 700 1_
- $a Colomé-Tatché, Maria $u European Research Institute for the Biology of Ageing, University Medical Center Groningen, 9713, Groningen, The Netherlands. Institute of Computational Biology, Helmholtz Zentrum München, 85764, Neuherberg, Germany. School of Life Sciences Weihenstephan, Technical University of Munich, 85354, Freising, Germany.
- 700 1_
- $a Durka, Walter $u Department of Community Ecology, Helmholtz Centre for Environmental Research - UFZ, 06120, Halle, Germany. German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, 04103, Leipzig, Germany.
- 700 1_
- $a Engelhardt, Jan $u Institut für Informatik, University of Leipzig, 04107, Leipzig, Germany.
- 700 1_
- $a Gaspar, Bence $u Plant Evolutionary Ecology, University of Tübingen, 72076, Tübingen, Germany.
- 700 1_
- $a Gogol-Döring, Andreas $u German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, 04103, Leipzig, Germany. Institute of Computer Science, University of Halle, 06120, Halle, Germany.
- 700 1_
- $a Grosse, Ivo $u German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, 04103, Leipzig, Germany. Institute of Computer Science, University of Halle, 06120, Halle, Germany.
- 700 1_
- $a van Gurp, Thomas P $u Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands.
- 700 1_
- $a Heer, Katrin $u Conservation Biology, Philipps-University of Marburg, 35037, Marburg, Germany.
- 700 1_
- $a Kronholm, Ilkka $u Department of Biological and Environmental Sciences, Center of Excellence in Biological Interactions, University of Jyväskylä, 40014, Jyväskylän yliopisto, Finland.
- 700 1_
- $a Lampei, Christian $u Institute of Plant Breeding, Seed Science and Population Genetics, 70599, Stuttgart, Germany.
- 700 1_
- $a Latzel, Vít $u Institute of Botany, The Czech Academy of Sciences, 25243, Průhonice, Czech Republic.
- 700 1_
- $a Mirouze, Marie $u Institut de Recherche pour le Développement, Laboratoire Génome et Développement des Plantes, 66860, Perpignan, France.
- 700 1_
- $a Opgenoorth, Lars $u Department of Ecology, Philipps-University Marburg, 35037, Marburg, Germany.
- 700 1_
- $a Paun, Ovidiu $u Plant Ecological Genomics, University of Vienna, 1030, Vienna, Austria.
- 700 1_
- $a Prohaska, Sonja J $u Institut für Informatik, University of Leipzig, 04107, Leipzig, Germany. The Santa Fe Institute, Santa Fe NM, 87501, USA.
- 700 1_
- $a Rensing, Stefan A $u Plant Cell Biology, Philipps-University Marburg, 35037, Marburg, Germany. BIOSS Centre for Biological Signaling Studies, University of Freiburg, 79098, Freiburg, Germany.
- 700 1_
- $a Stadler, Peter F $u German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, 04103, Leipzig, Germany. Institut für Informatik, University of Leipzig, 04107, Leipzig, Germany. The Santa Fe Institute, Santa Fe NM, 87501, USA. Max Planck Institute for Mathematics in the Sciences, 04103, Leipzig, Germany.
- 700 1_
- $a Trucchi, Emiliano $u Plant Ecological Genomics, University of Vienna, 1030, Vienna, Austria.
- 700 1_
- $a Ullrich, Kristian $u Plant Cell Biology, Philipps-University Marburg, 35037, Marburg, Germany.
- 700 1_
- $a Verhoeven, Koen J F $u Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands.
- 773 0_
- $w MED00007652 $t Ecology letters $x 1461-0248 $g Roč. 20, č. 12 (2017), s. 1576-1590
- 856 41
- $u https://pubmed.ncbi.nlm.nih.gov/29027325 $y Pubmed
- 910 __
- $a ABA008 $b sig $c sign $y a $z 0
- 990 __
- $a 20190405 $b ABA008
- 991 __
- $a 20190411110124 $b ABA008
- 999 __
- $a ok $b bmc $g 1392367 $s 1051362
- BAS __
- $a 3
- BAS __
- $a PreBMC
- BMC __
- $a 2017 $b 20 $c 12 $d 1576-1590 $e 20171012 $i 1461-0248 $m Ecology letters $n Ecol Lett $x MED00007652
- LZP __
- $a Pubmed-20190405
