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International Porphyria Molecular Diagnostic Collaborative: an evidence-based database of verified pathogenic and benign variants for the porphyrias
B. Chen, S. Whatley, M. Badminton, AK. Aarsand, KE. Anderson, DM. Bissell, HL. Bonkovsky, MD. Cappellini, Y. Floderus, ECH. Friesema, L. Gouya, P. Harper, R. Kauppinen, Y. Loskove, P. Martásek, JD. Phillips, H. Puy, S. Sandberg, C. Schmitt, J....
Language English Country United States
Document type Journal Article
Grant support
U2C TR002818
NCATS NIH HHS - United States
U54 DK083909
NIDDK NIH HHS - United States
U54 DK110858
NIDDK NIH HHS - United States
NLK
ProQuest Central
from 2011-01-01 to 2021-12-31
Health & Medicine (ProQuest)
from 2011-01-01 to 2021-12-31
ROAD: Directory of Open Access Scholarly Resources
from 1998
- MeSH
- Porphyria, Acute Intermittent genetics physiopathology MeSH
- Databases, Factual MeSH
- Data Curation methods MeSH
- Porphyrias, Hepatic genetics physiopathology MeSH
- Humans MeSH
- Pathology, Molecular MeSH
- Porphobilinogen Synthase deficiency genetics MeSH
- Porphyrias genetics physiopathology MeSH
- Virulence genetics MeSH
- Check Tag
- Humans MeSH
- Male MeSH
- Female MeSH
- Publication type
- Journal Article MeSH
- Geographicals
- United States MeSH
With the advent of precision and genomic medicine, a critical issue is whether a disease gene variant is pathogenic or benign. Such is the case for the three autosomal dominant acute hepatic porphyrias (AHPs), including acute intermittent porphyria, hereditary coproporphyria, and variegate porphyria, each resulting from the half-normal enzymatic activities of hydroxymethylbilane synthase, coproporphyrinogen oxidase, and protoporphyrinogen oxidase, respectively. To date, there is no public database that documents the likely pathogenicity of variants causing the porphyrias, and more specifically, the AHPs with biochemically and clinically verified information. Therefore, an international collaborative with the European Porphyria Network and the National Institutes of Health/National Center for Advancing Translational Sciences/National Institute of Diabetes and Digestive and Kidney Diseases (NIH/NCATS/NIDDK)-sponsored Porphyrias Consortium of porphyria diagnostic experts is establishing an online database that will collate biochemical and clinical evidence verifying the pathogenicity of the published and newly identified variants in the AHP-causing genes. The overall goal of the International Porphyria Molecular Diagnostic Collaborative is to determine the pathogenic and benign variants for all eight porphyrias. Here we describe the overall objectives and the initial efforts to validate pathogenic and benign variants in the respective heme biosynthetic genes causing the AHPs.
1st Faculty of Medicine Charles University Prague Prague Czech Republic
Department of Genetics and Genomic Sciences Icahn School of Medicine at Mount Sinai New York NY USA
Department of Internal Medicine University of Utah Salt Lake City UT USA
Department of Medical Biochemistry and Immunology University Hospital of Wales Cardiff UK
Department of Medicine University of California San Francisco CA USA
Department of Medicine Wake Forest University Winston Salem NC USA
Institute of Medical Genetics University Hospital of Wales Cardiff UK
References provided by Crossref.org
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