Determination and restrained least-squares refinement of the structures of ribonuclease Sa and its complex with 3'-guanylic acid at 1.8 A resolution
Jazyk angličtina Země Spojené státy americké Médium print
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
1654932
Knihovny.cz E-zdroje
- MeSH
- chemické jevy MeSH
- chemie fyzikální MeSH
- difrakce rentgenového záření MeSH
- konformace proteinů MeSH
- krystalizace MeSH
- kyselina 5'-guanylová metabolismus MeSH
- molekulární sekvence - údaje MeSH
- molekulární struktura MeSH
- ribonukleasy chemie metabolismus MeSH
- sekvence aminokyselin MeSH
- Streptomyces aureofaciens enzymologie MeSH
- vazebná místa MeSH
- vodíková vazba MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Názvy látek
- 3'-guanylic acid MeSH Prohlížeč
- kyselina 5'-guanylová MeSH
- ribonukleasy MeSH
The crystal structures of ribonuclease from Streptomyces aureofaciens (RNase Sa) and its complex with 3'-guanylic acid (guanosine 3'-monophosphate, 3'-GMP) have been determined by the method of isomorphous replacement. The atomic parameters have been refined by restrained least-squares minimization using data in the resolution range 10.0-1.8 A. All protein atoms and more than 230 water atoms in the two crystal structures have been refined to crystallographic R factors of 0.172 and 0.175 respectively. The estimated r.m.s. error in the atomic positions ranges from 0.2 A for well-defined atoms to about 0.5 A for more poorly defined atoms. There are two enzyme molecules in the asymmetric unit, built independently, and referred to as molecules A and B. The value of the average B factor for protein atoms in both structures is about 19 A2 and for water molecules about 35 A2. Electron density for the substrate analogue 3'-GMP was found only at the active site of molecule A. The density was very clear and the positions of all 3'-GMP atoms were refined with precision comparable to that of the protein.