Nuclear genome size and genomic distribution of ribosomal DNA in Musa and Ensete (Musaceae): taxonomic implications
Language English Country Switzerland Media print
Document type Journal Article, Research Support, Non-U.S. Gov't
PubMed
15753558
DOI
10.1159/000082381
PII: 82381
Knihovny.cz E-resources
- MeSH
- Musa classification genetics MeSH
- Musaceae classification genetics MeSH
- Cell Nucleus genetics MeSH
- DNA, Plant genetics MeSH
- Species Specificity MeSH
- Genome, Plant MeSH
- DNA, Ribosomal genetics MeSH
- RNA, Plant genetics MeSH
- Geography MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
- Names of Substances
- DNA, Plant MeSH
- DNA, Ribosomal MeSH
- RNA, Plant MeSH
Nuclear DNA content and genomic distributions of 5S and 45S rDNA were examined in nineteen diploid accessions of the genus Musa representing its four sections Eumusa, Rhodochlamys, Callimusa and Australimusa, and in Ensete gilletii, which was the outgroup in this study. In the Eumusa (x = 11), 2C DNA content ranged from 1.130 to 1.377 pg, M. balbisiana having the lowest DNA content of all sections. M. beccarii (x = 9), a representative of Callimusa, had the highest 2C nuclear DNA content (1.561 pg). Species belonging to Rhodochlamys (x = 11) and Australimusa (x = 10) had 2C DNA contents ranging from 1.191 to 1.299 pg and from 1.435 to 1.547 pg, respectively. E. gilletii (x = 9) had 2C DNA content of 1.210 pg. The number of 5S rDNA loci in Musa varied from 4 to 8 per diploid cell. While different numbers of 5S rDNA loci were observed within Eumusa and Rhodochlamys, four 5S rDNA loci were observed in all accessions of Australimusa. M. beccarii (Callimusa) and E. gilletii contained 5S rRNA gene clusters on five and six chromosomes, respectively. The number of 45S rDNA loci was conserved within individual sections. Hierarchical cluster analysis of genome size, number of chromosomes and 45S rDNA sites suggested a close relationship between Rhodochlamys and Eumusa; Australimusa was clearly separated as were M. beccarii and E. gilletii. Within the Eumusa-Rhodochlamys group, M. balbisiana, M. schizocarpa and M. ornata formed distinct subgroups, clearly separated from the accessions of M. acuminata, M. mannii, M. laterita and M. velutina, which formed a tight subgroup. The results expand the knowledge of genome size and genomic distribution of ribosomal DNA in Musa and Ensete. They aid in clarification of the taxonomical classification of Musa and show a need to supplement the analyses on the DNA sequence level with cytogenetic studies.
References provided by Crossref.org
Advances in the Molecular Cytogenetics of Bananas, Family Musaceae
Molecular and Cytogenetic Study of East African Highland Banana
Molecular and Cytogenetic Characterization of Wild Musa Species
Genome-wide analysis of repeat diversity across the family Musaceae
Molecular analysis and genomic organization of major DNA satellites in banana (Musa spp.)
A platform for efficient genotyping in Musa using microsatellite markers
A multi gene sequence-based phylogeny of the Musaceae (banana) family
Repetitive part of the banana (Musa acuminata) genome investigated by low-depth 454 sequencing