Wide-scale screening of T-DNA lines for transcription factor genes affecting male gametophyte development in Arabidopsis
Jazyk angličtina Země Německo Médium print-electronic
Typ dokumentu časopisecké články, práce podpořená grantem
- MeSH
- Arabidopsis genetika růst a vývoj metabolismus MeSH
- DNA bakterií MeSH
- fenotyp MeSH
- multigenová rodina MeSH
- pyl růst a vývoj MeSH
- rostlinné geny MeSH
- transkripční faktory metabolismus MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Názvy látek
- DNA bakterií MeSH
- T-DNA MeSH Prohlížeč
- transkripční faktory MeSH
Male gametophyte development leading to the formation of a mature pollen grain is precisely controlled at various levels, including transcriptional, post-transcriptional and post-translational, during its whole progression. Transcriptomic studies exploiting genome-wide microarray technologies revealed the uniqueness of pollen transcriptome and the dynamics of early and late successive global gene expression programs. However, the knowledge of transcription regulation is still very limited. In this study, we focused on the identification of pollen-expressed transcription factor (TF) genes involved in the regulation of male gametophyte development. To achieve this, the reverse genetic approach was used. Seventy-four T-DNA insertion lines were screened, representing 49 genes of 21 TF families active in either early or late pollen development. In the screen, ten phenotype categories were distinguished, affecting various structural or functional aspects, including pollen abortion, presence of inclusions, variable pollen grain size, disrupted cell wall structure, cell cycle defects, and male germ unit organization. Thirteen lines were not confirmed to contain the T-DNA insertion. Among 61 confirmed lines, about half (29 lines) showed strong phenotypic changes (i.e., ≥ 25% aberrant pollen) including four lines that produced a remarkably high proportion (70-100%) of disturbed pollen. However, the remaining 32 lines exhibited mild defects or resembled wild-type appearance. There was no significant bias toward any phenotype category among early and late TF genes, nor, interestingly, within individual TF families. Presented results have a potential to serve as a basal information resource for future research on the importance of respective TFs in male gametophyte development.
Zobrazit více v PubMed
BMC Plant Biol. 2007 Jul 23;7:39 PubMed
Genome Biol. 2001;2(8):RESEARCH0032 PubMed
J Exp Bot. 2009;60(5):1479-92 PubMed
Proc Natl Acad Sci U S A. 2008 Sep 9;105(36):13679-84 PubMed
Plant Mol Biol. 2006 May;61(1-2):165-77 PubMed
Curr Opin Plant Biol. 2001 Oct;4(5):447-56 PubMed
Plant Cell. 2010 Mar;22(3):782-96 PubMed
Development. 1998 Oct;125(19):3789-99 PubMed
Plant Physiol. 2003 Jun;132(2):640-52 PubMed
Plant Cell. 2010 Jan;22(1):91-107 PubMed
Plant Cell. 2002 Dec;14(12):2985-94 PubMed
Curr Opin Plant Biol. 2001 Apr;4(2):111-7 PubMed
Plant Mol Biol. 2006 Jan;60(1):107-24 PubMed
Plant Physiol. 2006 Nov;142(3):1004-13 PubMed
Mol Plant. 2010 Mar;3(2):361-73 PubMed
Plant Physiol. 1998 Jul;117(3):1015-22 PubMed
Bioinformatics. 2005 May 15;21(10):2568-9 PubMed
J Proteome Res. 2009 Apr;8(4):2015-31 PubMed
Plant J. 2001 Oct;28(1):27-39 PubMed
Annu Rev Genet. 2002;36:99-124 PubMed
Proc Natl Acad Sci U S A. 2000 Dec 5;97(25):13579-84 PubMed
Plant J. 2004 Dec;40(6):979-95 PubMed
Proc Natl Acad Sci U S A. 1999 Sep 28;96(20):11664-9 PubMed
J Exp Bot. 2009;60(5):1465-78 PubMed
Plant Physiol. 2005 Jun;138(2):744-56 PubMed
Plant Cell. 2002 Oct;14(10):2353-67 PubMed
Planta. 2009 Feb;229(3):605-15 PubMed
Science. 1999 Dec 10;286(5447):2119-25 PubMed
EMBO J. 2005 May 18;24(10):1874-85 PubMed
Plant J. 2010 Mar;61(6):928-40 PubMed
Plant Mol Biol. 1999 Nov;41(5):577-85 PubMed
BMC Bioinformatics. 2003 Jun 23;4:25 PubMed
Plant Physiol. 2009 Apr;149(4):1713-23 PubMed
Plant Physiol. 2004 Apr;134(4):1586-97 PubMed
Proc Natl Acad Sci U S A. 1999 Sep 28;96(20):11416-21 PubMed
Plant Cell. 1998 Jun;10(6):1043-54 PubMed
Plant Cell Physiol. 2008 Oct;49(10):1429-50 PubMed
PLoS Genet. 2009 Mar;5(3):e1000440 PubMed
J Exp Bot. 2006;57(11):2709-17 PubMed
Plant Physiol. 2007 Sep;145(1):98-105 PubMed
Plant Cell Physiol. 2002 Nov;43(11):1285-92 PubMed
Development. 1996 Oct;122(10):3243-53 PubMed
Plant Mol Biol. 2009 Jan;69(1-2):107-19 PubMed
Science. 2003 Aug 1;301(5633):653-7 PubMed
Plant J. 2003 Jan;33(2):413-23 PubMed
Plant Cell. 2007 Nov;19(11):3530-48 PubMed
Science. 1990 Oct 12;250(4978):267-71 PubMed
Genetics. 2004 Aug;167(4):1975-86 PubMed
Planta. 2008 Oct;228(5):709-23 PubMed
Plant Cell. 1990 Aug;2(8):755-67 PubMed
Gene. 2010 Jun 1;457(1-2):1-12 PubMed
Plant Physiol. 2004 Sep;136(1):2734-46 PubMed
Adv Exp Med Biol. 2011;722:118-36 PubMed
Prog Nucleic Acid Res Mol Biol. 1993;46:51-91 PubMed
Sex Plant Reprod. 2004 May 26;17(2):63-70 PubMed
Plant Physiol. 2005 Jan;137(1):297-307 PubMed
Genes Dev. 2002 Aug 1;16(15):2021-31 PubMed
Curr Opin Biotechnol. 2000 Apr;11(2):157-61 PubMed
Bioinformatics. 2009 Jan 15;25(2):159-62 PubMed
Plant Cell. 2000 Jul;12(7):1093-101 PubMed
Development. 2006 Aug;133(16):3085-95 PubMed
Plant Physiol. 2003 Apr;131(4):1855-67 PubMed
Plant Cell. 1998 Jun;10(6):925-36 PubMed
Genetics. 1998 Jun;149(2):621-31 PubMed
BMC Genomics. 2008 Jan 27;9:44 PubMed
Curr Biol. 2002 Oct 15;12(20):1718-27 PubMed
Plant Mol Biol. 2009 Jul;70(5):581-601 PubMed
J Integr Plant Biol. 2008 Jul;50(7):886-96 PubMed
PLoS Genet. 2009 Mar;5(3):e1000430 PubMed
Gene. 2006 Feb 1;366(2):256-65 PubMed
Plant Physiol. 2008 Oct;148(2):1168-81 PubMed
Plant Physiol. 2008 Nov;148(3):1201-11 PubMed
Genes Dev. 1999 Aug 15;13(16):2108-17 PubMed
Plant Physiol. 2004 Sep;136(1):2621-32 PubMed
Plant Physiol. 2006 Mar;140(3):818-29 PubMed
Genome Biol. 2007;8(11):R249 PubMed
Plant Physiol. 2002 Jun;129(2):865-75 PubMed
Plant Cell. 1996 Jul;8(7):1107-19 PubMed
Plant Cell. 2006 Nov;18(11):2971-84 PubMed
Genome Res. 2009 Oct;19(10):1786-800 PubMed
Nature. 2007 Nov 1;450(7166):119-23 PubMed
Plant Cell. 2005 Mar;17(3):705-21 PubMed
Biol Chem. 1998 Jun;379(6):633-46 PubMed
J Exp Bot. 2010 Sep;61(14):3901-14 PubMed
Sex Plant Reprod. 2011 Jun;24(2):149-60 PubMed
Development. 2006 May;133(9):1645-55 PubMed
Plant J. 2009 Nov;60(3):476-87 PubMed
Plant Cell. 2010 Mar;22(3):672-89 PubMed
Plant J. 2010 Jul 1;63(1):155-66 PubMed
PLoS Genet. 2009 Aug;5(8):e1000621 PubMed
Plant Cell. 2005 Aug;17(8):2384-96 PubMed
Mol Biol Evol. 2007 Mar;24(3):670-8 PubMed
Cell Biol Int. 2003;27(7):559-66 PubMed
Plant J. 2003 May;34(4):519-28 PubMed
Plant Mol Biol. 2006 May;61(1-2):13-30 PubMed
J Plant Physiol. 2010 Nov 15;167(17):1512-20 PubMed
Gene. 2007 Jun 1;394(1-2):13-24 PubMed
Plant Cell. 2007 Nov;19(11):3549-62 PubMed
Plant Cell. 2005 May;17(5):1424-33 PubMed
Proc Natl Acad Sci U S A. 2001 Jan 2;98(1):31-6 PubMed
Gene. 2000 May 2;248(1-2):23-32 PubMed
Plant Cell. 2009 Apr;21(4):1109-28 PubMed
Plant Cell. 2004 Oct;16(10):2601-13 PubMed
J Biochem Mol Biol. 2007 Nov 30;40(6):1083-9 PubMed
Genome Biol. 2004;5(11):R85 PubMed
Plant J. 1998 Jul;15(1):79-88 PubMed
Plant Cell. 2001 May;13(5):1231-44 PubMed
Plant J. 2000 Nov;24(4):457-66 PubMed
Plant Physiol. 2009 Nov;151(3):1486-97 PubMed
Plant Mol Biol. 2006 May;61(1-2):215-26 PubMed
Plant Cell. 2008 Jul;20(7):1760-74 PubMed
Proc Natl Acad Sci U S A. 2003 Feb 18;100(4):2152-6 PubMed
Development. 2005 Feb;132(3):603-14 PubMed
J Biol Chem. 2002 Jul 19;277(29):26429-35 PubMed
Plant Cell. 2003 Jan;15(1):63-78 PubMed
Trends Plant Sci. 2002 Mar;7(3):106-11 PubMed
Genetics. 1997 Nov;147(3):1411-22 PubMed
Plant Mol Biol. 2006 Jun;61(3):415-30 PubMed
Science. 2000 Dec 15;290(5499):2105-10 PubMed
Nature. 2004 Jul 15;430(6997):356-60 PubMed
Plant Physiol. 2006 Mar;140(3):890-8 PubMed
Plant Cell. 2003 Aug;15(8):1749-70 PubMed
Mol Gen Genet. 1998 Dec;260(5):444-52 PubMed
Mol Cells. 2009 Apr 30;27(4):481-90 PubMed
Genetics. 1999 Feb;151(2):849-63 PubMed
Genetics. 2004 Oct;168(2):971-82 PubMed
Plant Physiol. 2003 Oct;133(2):713-25 PubMed
Plant J. 2007 Nov;52(3):528-38 PubMed
Plant J. 2004 Apr;38(2):332-47 PubMed
Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W465-70 PubMed
Dev Biol. 2005 Sep 1;285(1):91-100 PubMed
Plant J. 2003 Jul;35(2):177-92 PubMed
Curr Biol. 2005 Feb 8;15(3):244-8 PubMed
Cell. 1997 Oct 17;91(2):149-51 PubMed