Prevalence of Germline Pathogenic Variants in Cancer Predisposing Genes in Czech and Belgian Pancreatic Cancer Patients
Status PubMed-not-MEDLINE Jazyk angličtina Země Švýcarsko Médium electronic
Typ dokumentu časopisecké články
Grantová podpora
STI.VLK.2017.0007.01
Kom op tegen Kanker
2017-J1140800- 207846
Koning Boudewijnstichting
NU20-03-00285
Ministerstvo Zdravotnictví Ceské Republiky
RVO-VFN 64165
Ministerstvo Zdravotnictví Ceské Republiky
SVV 260516
Univerzita Karlova v Praze
PROGRES Q28/LF1
Univerzita Karlova v Praze
PubMed
34503238
PubMed Central
PMC8431631
DOI
10.3390/cancers13174430
PII: cancers13174430
Knihovny.cz E-zdroje
- Klíčová slova
- family history, germline, multigene panel testing, overall survival, pancreatic ductal adenocarcinoma,
- Publikační typ
- časopisecké články MeSH
(1) Background: The proportion and spectrum of germline pathogenic variants (PV) associated with an increased risk for pancreatic ductal adenocarcinoma (PDAC) varies among populations. (2) Methods: We analyzed 72 Belgian and 226 Czech PDAC patients by multigene panel testing. The prevalence of pathogenic variants (PV) in relation to personal/family cancer history were evaluated. PDAC risks were calculated using both gnomAD-NFE and population-matched controls. (3) Results: In 35/298 (11.7%) patients a PV in an established PDAC-predisposition gene was found. BRCA1/2 PV conferred a high risk in both populations, ATM and Lynch genes only in the Belgian subgroup. PV in other known PDAC-predisposition genes were rarer. Interestingly, a high frequency of CHEK2 PV was observed in both patient populations. PV in PDAC-predisposition genes were more frequent in patients with (i) multiple primary cancers (12/38; 32%), (ii) relatives with PDAC (15/56; 27%), (iii) relatives with breast/ovarian/colorectal cancer or melanoma (15/86; 17%) but more rare in sporadic PDAC (5/149; 3.4%). PV in homologous recombination genes were associated with improved overall survival (HR = 0.51; 95% CI 0.34-0.77). (4) Conclusions: Our analysis emphasizes the value of multigene panel testing in PDAC patients, especially in individuals with a positive family cancer history, and underlines the importance of population-matched controls for risk assessment.
Cancer Research Institute Ghent 9000 Ghent Belgium
Center for Medical Genetics Ghent University and Ghent University Hospital 9000 Ghent Belgium
Center of Medical Genetics UZA UA Antwerp University Hospital 2000 Antwerp Belgium
Department of Gastroenterology Ghent University Hospital 9000 Ghent Belgium
Digestive Oncology Unit University Hospital Gasthuisberg 3000 Leuven Belgium
Zobrazit více v PubMed
Siegel R.L., Miller K.D., Jemal A. Cancer statistics, 2019. CA Cancer J. Clin. 2019;69:7–34. doi: 10.3322/caac.21551. PubMed DOI
Benzel J., Fendrich V. Familial Pancreatic Cancer. Oncol. Res. Treat. 2018;41:611–618. doi: 10.1159/000493473. PubMed DOI
Llach J., Carballal S., Moreira L. Familial Pancreatic Cancer: Current Perspectives. Cancer Manag. Res. 2020;12:743–758. doi: 10.2147/CMAR.S172421. PubMed DOI PMC
Goggins M., Overbeek K.A., Brand R., Syngal S., Del Chiaro M., Bartsch D.K., Bassi C., Carrato A., Farrell J., Fishman E.K., et al. Management of patients with increased risk for familial pancreatic cancer: Updated recommendations from the International Cancer of the Pancreas Screening (CAPS) Consortium. Gut. 2020;69:7–17. doi: 10.1136/gutjnl-2019-319352. PubMed DOI PMC
Golan T., Kindler H.L., Park J.O., Reni M., Macarulla T., Hammel P., Van Cutsem E., Arnold D., Hochhauser D., McGuinness D., et al. Geographic and Ethnic Heterogeneity of Germline BRCA1 or BRCA2 Mutation Prevalence Among Patients With Metastatic Pancreatic Cancer Screened for Entry Into the POLO Trial. J. Clin. Oncol. Off. J. Am. Soc. Clin. Oncol. 2020;38:1442–1454. doi: 10.1200/JCO.19.01890. PubMed DOI
Hruban R.H., Canto M.I., Goggins M., Schulick R., Klein A.P. Update on familial pancreatic cancer. Adv. Surg. 2010;44:293–311. doi: 10.1016/j.yasu.2010.05.011. PubMed DOI PMC
Salo-Mullen E.E., O’Reilly E.M., Kelsen D.P., Ashraf A.M., Lowery M.A., Yu K.H., Reidy D.L., Epstein A.S., Lincoln A., Saldia A., et al. Identification of germline genetic mutations in patients with pancreatic cancer. Cancer. 2015;121:4382–4388. doi: 10.1002/cncr.29664. PubMed DOI PMC
Shindo K., Yu J., Suenaga M., Fesharakizadeh S., Cho C., Macgregor-Das A., Siddiqui A., Witmer P.D., Tamura K., Song T.J., et al. Deleterious Germline Mutations in Patients With Apparently Sporadic Pancreatic Adenocarcinoma. J. Clin. Oncol. 2017;35:3382–3390. doi: 10.1200/JCO.2017.72.3502. PubMed DOI PMC
Yurgelun M.B., Chittenden A.B., Morales-Oyarvide V., Rubinson D.A., Dunne R.F., Kozak M.M., Qian Z.R., Welch M.W., Brais L.K., Da Silva A., et al. Germline cancer susceptibility gene variants, somatic second hits, and survival outcomes in patients with resected pancreatic cancer. Genetic. Med. 2019;21:213–223. doi: 10.1038/s41436-018-0009-5. PubMed DOI PMC
Fountzilas E., Eliades A., Koliou G.-A., Achilleos A., Loizides C., Tsangaras K., Pectasides D., Sgouros J., Papakostas P., Rallis G., et al. Clinical Significance of Germline Cancer Predisposing Variants in Unselected Patients with Pancreatic Adenocarcinoma. Cancers. 2021;13:198. doi: 10.3390/cancers13020198. PubMed DOI PMC
Goldstein J.B., Zhao L., Wang X., Ghelman Y., Overman M.J., Javle M.M., Shroff R.T., Varadhachary G.R., Wolff R.A., McAllister F., et al. Germline DNA Sequencing Reveals Novel Mutations Predictive of Overall Survival in a Cohort of Patients with Pancreatic Cancer. Clin. Cancer Res. 2020;26:1385–1394. doi: 10.1158/1078-0432.CCR-19-0224. PubMed DOI
Pishvaian M.J., Blais E.M., Brody J.R., Lyons E., DeArbeloa P., Hendifar A., Mikhail S., Chung V., Sahai V., Sohal D.P.S., et al. Overall survival in patients with pancreatic cancer receiving matched therapies following molecular profiling: A retrospective analysis of the Know Your Tumor registry trial. Lancet Oncol. 2020;21:508–518. doi: 10.1016/S1470-2045(20)30074-7. PubMed DOI PMC
Golan T., Hammel P., Reni M., Van Cutsem E., Macarulla T., Hall M.J., Park J.-O., Hochhauser D., Arnold D., Oh D.-Y., et al. Maintenance Olaparib for Germline BRCA-Mutated Metastatic Pancreatic Cancer. N. Engl. J. Med. 2019;381:317–327. doi: 10.1056/NEJMoa1903387. PubMed DOI PMC
Slavin T.P., Niell-Swiller M., Solomon I., Nehoray B., Rybak C., Blazer K.R., Weitzel J.N. Clinical Application of Multigene Panels: Challenges of Next-Generation Counseling and Cancer Risk Management. Front. Oncol. 2015;5:208. doi: 10.3389/fonc.2015.00208. PubMed DOI PMC
Kleiblova P., Stolarova L., Krizova K., Lhota F., Hojny J., Zemankova P., Havranek O., Vocka M., Cerna M., Lhotova K., et al. Identification of deleterious germline CHEK2 mutations and their association with breast and ovarian cancer. Int. J. Cancer. 2019;145:1782–1797. doi: 10.1002/ijc.32385. PubMed DOI
Soukupova J., Zemankova P., Lhotova K., Janatova M., Borecka M., Stolarova L., Lhota F., Foretova L., Machackova E., Stranecky V., et al. Validation of CZECANCA (CZEch CAncer paNel for Clinical Application) for targeted NGS-based analysis of hereditary cancer syndromes. PLoS ONE. 2018;13:e0195761. doi: 10.1371/journal.pone.0195761. PubMed DOI PMC
Richards S., Aziz N., Bale S., Bick D., Das S., Gastier-Foster J., Grody W.W., Hegde M., Lyon E., Spector E., et al. Standards and guidelines for the interpretation of sequence variants: A joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology. Genet. Med. 2015;17:405–424. doi: 10.1038/gim.2015.30. PubMed DOI PMC
Genome Aggregation Database (gnomAD) [(accessed on 30 September 2020)]; Available online: http://gnomad.broadinstitute.org/
Claes K., Poppe B., Coene I., De Paepe A., Messiaen L. BRCA1 and BRCA2 germline mutation spectrum and frequencies in Belgian breast/ovarian cancer families. Br. J. Cancer. 2004;90:1244–1251. doi: 10.1038/sj.bjc.6601656. PubMed DOI PMC
Pohlreich P., Zikan M., Stribrna J., Kleibl Z., Janatova M., Kotlas J., Zidovska J., Novotny J., Petruzelka L., Szabo C., et al. High proportion of recurrent germline mutations in the BRCA1 gene in breast and ovarian cancer patients from the Prague area. Breast Cancer Res. 2005;7:R728–R736. doi: 10.1186/bcr1282. PubMed DOI PMC
Hu C., Hart S.N., Polley E.C., Gnanaolivu R., Shimelis H., Lee K.Y., Lilyquist J., Na J., Moore R., Antwi S.O., et al. Association Between Inherited Germline Mutations in Cancer Predisposition Genes and Risk of Pancreatic Cancer. JAMA. 2018;319:2401–2409. doi: 10.1001/jama.2018.6228. PubMed DOI PMC
Armstrong S.A., Schultz C.W., Azimi-Sadjadi A., Brody J.R., Pishvaian M.J. ATM Dysfunction in Pancreatic Adenocarcinoma and Associated Therapeutic Implications. Mol. Cancer Ther. 2019;18:1899–1908. doi: 10.1158/1535-7163.MCT-19-0208. PubMed DOI PMC
Cremin C., Lee M.K.-C., Hong Q., Hoeschen C., Mackenzie A., Dixon K., McCullum M., Nuk J., Kalloger S., Karasinska J., et al. Burden of hereditary cancer susceptibility in unselected patients with pancreatic ductal adenocarcinoma referred for germline screening. Cancer Med. 2020;9:4004–4013. doi: 10.1002/cam4.2973. PubMed DOI PMC
Brand R., Borazanci E., Speare V., Dudley B., Karloski E., Peters M.L.B., Stobie L., Bahary N., Zeh H., Zureikat A., et al. Prospective study of germline genetic testing in incident cases of pancreatic adenocarcinoma. Cancer. 2018;124:3520–3527. doi: 10.1002/cncr.31628. PubMed DOI
Cybulski C., Górski B., Huzarski T., Masojć B., Mierzejewski M., Debniak T., Teodorczyk U., Byrski T., Gronwald J., Matyjasik J., et al. CHEK2 is a multiorgan cancer susceptibility gene. Am. J. Hum. Genet. 2004;75:1131–1135. doi: 10.1086/426403. PubMed DOI PMC
Stolarova L., Kleiblova P., Janatova M., Soukupova J., Zemankova P., Macurek L., Kleibl Z. CHEK2 Germline Variants in Cancer Predisposition: Stalemate Rather than Checkmate. Cells. 2020;9:2675. doi: 10.3390/cells9122675. PubMed DOI PMC
Lener M.R., Kashyap A., Kluzniak W., Cybulski C., Soluch A., Pietrzak S., Huzarski T., Gronwald J., Lubinski J. The Prevalence of Founder Mutations Among Individuals from Families with Familial Pancreatic Cancer Syndrome. Cancer Res. Treat. 2016 doi: 10.4143/crt.2016.217. PubMed DOI PMC
Zhan W., Shelton C.A., Greer P.J., Brand R.E., Whitcomb D.C. Germline Variants and Risk for Pancreatic Cancer: A Systematic Review and Emerging Concepts. Pancreas. 2018;47:924–936. doi: 10.1097/MPA.0000000000001136. PubMed DOI PMC
Doi H., Koyano S., Miyatake S., Nakajima S., Nakazawa Y., Kunii M., Tomita-Katsumoto A., Oda K., Yamaguchi Y., Fukai R., et al. Cerebellar ataxia-dominant phenotype in patients with ERCC4 mutations. J. Hum. Genet. 2018;63:417–423. doi: 10.1038/s10038-017-0408-5. PubMed DOI
Lener M.R., Scott R.J., Kluzniak W., Baszuk P., Cybulski C., Wiechowska-Kozlowska A., Huzarski T., Byrski T., Kladny J., Pietrzak S., et al. Do founder mutations characteristic of some cancer sites also predispose to pancreatic cancer? Int. J. Cancer. 2016;139:601–606. doi: 10.1002/ijc.30116. PubMed DOI
Borecka M., Zemankova P., Lhota F., Soukupova J., Kleiblova P., Vocka M., Soucek P., Ticha I., Kleibl Z., Janatova M. The c.657del5 variant in the NBN gene predisposes to pancreatic cancer. Gene. 2016;587:169–172. doi: 10.1016/j.gene.2016.04.056. PubMed DOI
Rump A., Benet-Pages A., Schubert S., Kuhlmann J.D., Janavičius R., Macháčková E., Foretová L., Kleibl Z., Lhota F., Zemankova P., et al. Identification and Functional Testing of ERCC2 Mutations in a Multi-national Cohort of Patients with Familial Breast- and Ovarian Cancer. PLoS Genet. 2016;12:1–18. doi: 10.1371/journal.pgen.1006248. PubMed DOI PMC
Dudley B., Karloski E., Monzon F.A., Singhi A.D., Lincoln S.E., Bahary N., Brand R.E. Germline mutation prevalence in individuals with pancreatic cancer and a history of previous malignancy. Cancer. 2018;124:1691–1700. doi: 10.1002/cncr.31242. PubMed DOI
Bartsch D.K., Matthäi E., Mintziras I., Bauer C., Figiel J., Sina-Boemers M., Gress T.M., Langer P., Slater E.P. The German National Case Collection for Familial Pancreatic Carcinoma (FaPaCa)—Knowledge Gained in 20 Years. Dtsch. Arztebl. Int. 2021;118:163–168. doi: 10.3238/arztebl.m2021.0004. PubMed DOI PMC
Chaffee K.G., Oberg A.L., McWilliams R.R., Majithia N., Allen B.A., Kidd J., Singh N., Hartman A.-R., Wenstrup R.J., Petersen G.M. Prevalence of germ-line mutations in cancer genes among pancreatic cancer patients with a positive family history. Genet. Med. 2018;20:119–127. doi: 10.1038/gim.2017.85. PubMed DOI PMC
Takai E., Yachida S., Shimizu K., Furuse J., Kubo E., Ohmoto A., Suzuki M., Hruban R.H., Okusaka T., Morizane C., et al. Germline mutations in Japanese familial pancreatic cancer patients. Oncotarget. 2016;7:74227–74235. doi: 10.18632/oncotarget.12490. PubMed DOI PMC
Rustgi A.K. Familial pancreatic cancer: Genetic advances. Genes Dev. 2014;28:1–7. doi: 10.1101/gad.228452.113. PubMed DOI PMC
Grant R.C., Selander I., Connor A.A., Selvarajah S., Borgida A., Briollais L., Petersen G.M., Lerner-Ellis J., Holter S., Gallinger S. Prevalence of germline mutations in cancer predisposition genes in patients with pancreatic cancer. Gastroenterology. 2015;148:556–564. doi: 10.1053/j.gastro.2014.11.042. PubMed DOI PMC
Smith A.L., Alirezaie N., Connor A., Chan-Seng-Yue M., Grant R., Selander I., Bascuñana C., Borgida A., Hall A., Whelan T., et al. Candidate DNA repair susceptibility genes identified by exome sequencing in high-risk pancreatic cancer. Cancer Lett. 2016;370:302–312. doi: 10.1016/j.canlet.2015.10.030. PubMed DOI PMC
Yadav S., Kasi P.M., Bamlet W.R., Ho T.P., Polley E.C., Hu C., Hart S.N., Rabe K.G., Boddicker N.J., Gnanaolivu R.D., et al. Effect of Germline Mutations in Homologous Recombination Repair Genes on Overall Survival of Patients with Pancreatic Adenocarcinoma. Clin. Cancer Res. Off. J. Am. Assoc. Cancer Res. 2020;26:6505–6512. doi: 10.1158/1078-0432.CCR-20-1788. PubMed DOI PMC
Le D.T., Durham J.N., Smith K.N., Wang H., Bartlett B.R., Aulakh L.K., Lu S., Kemberling H., Wilt C., Luber B.S., et al. Mismatch repair deficiency predicts response of solid tumors to PD-1 blockade. Science. 2017;357:409–413. doi: 10.1126/science.aan6733. PubMed DOI PMC
Germline multigene panel testing of patients with endometrial cancer