Germline multigene panel testing of patients with endometrial cancer
Status PubMed-not-MEDLINE Jazyk angličtina Země Řecko Médium electronic-ecollection
Typ dokumentu časopisecké články
PubMed
37153042
PubMed Central
PMC10157349
DOI
10.3892/ol.2023.13802
PII: OL-25-6-13802
Knihovny.cz E-zdroje
- Klíčová slova
- EC, germline mutations, multigene panel testing, uterine malignancies,
- Publikační typ
- časopisecké články MeSH
Endometrial cancer (EC) is the most common gynecological malignancy in developed countries. The present study aimed to determine the frequency of germline pathogenic variants (PV) in patients with EC. In this multicenter retrospective cohort study, germline genetic testing (GGT) was performed in 527 patients with EC using a next generation sequencing panel targeting 226 genes, including 5 Lynch syndrome (LS) and 14 hereditary breast and ovarian cancer (HBOC) predisposition genes, and 207 candidate predisposition genes. Gene-level risks were calculated using 1,662 population-matched controls (PMCs). Patients were sub-categorized to fulfill GGT criteria for LS, HBOC, both or none. A total of 60 patients (11.4%) carried PV in LS (5.1%) and HBOC (6.6%) predisposition genes, including two carriers of double PV. PV in LS genes conferred a significantly higher EC risk [odds ratio (OR), 22.4; 95% CI, 7.8-64.3; P=1.8×10-17] than the most frequently altered HBOC genes BRCA1 (OR, 3.9; 95% CI, 1.6-9.5; P=0.001), BRCA2 (OR, 7.4; 95% CI, 1.9-28.9; P=0.002) and CHEK2 (OR, 3.2; 95% CI, 1.0-9.9; P=0.04). Furthermore, >6% of patients with EC not fulfilling LS or HBOC GGT indication criteria carried a PV in a clinically relevant gene. Carriers of PV in LS genes had a significantly lower age of EC onset than non-carriers (P=0.01). Another 11.0% of patients carried PV in a candidate gene (the most frequent were FANCA and MUTYH); however, their individual frequencies did not differ from PMCs (except for aggregated frequency of loss-of-function variants in POLE/POLD1; OR, 10.44; 95% CI, 1.1-100.5; P=0.012). The present study demonstrated the importance of GGT in patients with EC. The increased risk of EC of PV carriers in HBOC genes suggests that the diagnosis of EC should be included in the HBOC GGT criteria.
BIOCEV 1st Faculty of Medicine Charles University Prague 252 50 Czech Republic
Center for Medical Genetics and Reproductive Medicine Gennet Prague 170 00 Czech Republic
Department of Biochemistry Faculty of Science Charles University Prague 120 00 Czech Republic
Department of Medical Genetics Pronatal Prague 140 00 Czech Republic
Laboratory of Molecular Genetics Hospital Ceske Budejovice Ceske Budejovice 370 00 Czech Republic
Zobrazit více v PubMed
Lortet-Tieulent J, Ferlay J, Bray F, Jemal A. International patterns and trends in endometrial cancer incidence, 1978–2013. J Natl Cancer Inst. 2018;110:354–361. doi: 10.1093/jnci/djx214. PubMed DOI
Arend RC, Jones BA, Martinez A, Goodfellow P. Endometrial cancer: Molecular markers and management of advanced stage disease. Gynecol Oncol. 2018;150:569–580. doi: 10.1016/j.ygyno.2018.05.015. PubMed DOI
Ferlay J, Colombet M, Soerjomataram I, Dyba T, Randi G, Bettio M, Gavin A, Visser O, Bray F. Cancer incidence and mortality patterns in Europe: Estimates for 40 countries and 25 major cancers in 2018. Eur J Cancer. 2018;103:356–387. doi: 10.1016/j.ejca.2018.07.005. PubMed DOI
Raglan O, Kalliala I, Markozannes G, Cividini S, Gunter MJ, Nautiyal J, Gabra H, Paraskevaidis E, Martin-Hirsch P, Tsilidis KK, Kyrgiou M. Risk factors for endometrial cancer: An umbrella review of the literature. Int J Cancer. 2019;145:1719–1730. doi: 10.1002/ijc.31961. PubMed DOI
Spurdle AB, Bowman MA, Shamsani J, Kirk J. Endometrial cancer gene panels: Clinical diagnostic vs research germline DNA testing. Mod Pathol. 2017;30:1048–1068. doi: 10.1038/modpathol.2017.20. PubMed DOI
Levine MD, Pearlman R, Hampel H, Cosgrove C, Cohn D, Chassen A, Suarez A, Barrington DA, McElroy JP, Waggoner S, et al. Up-front multigene panel testing for cancer susceptibility in patients with newly diagnosed endometrial cancer: A multicenter prospective study. JCO Precis Oncol. 2021;5:1588–1602. doi: 10.1200/PO.21.00249. PubMed DOI PMC
Tian W, Bi R, Ren Y, He H, Shi S, Shan B, Yang W, Wang Q, Wang H. Screening for hereditary cancers in patients with endometrial cancer reveals a high frequency of germline mutations in cancer predisposition genes. Int J Cancer. 2019;145:1290–1298. doi: 10.1002/ijc.32389. PubMed DOI
Cadoo KA, Mandelker DL, Mukherjee S, Stewart C, DeLair D, Ravichandran V, Srinivasan P, Hurley D, Kemel Y, Arnold AG, et al. Understanding inherited risk in unselected newly diagnosed patients with endometrial cancer. JCO Precis Oncol. 2019;3 PO.18.00338. PubMed PMC
Long B, Lilyquist J, Weaver A, Hu C, Gnanaolivu R, Lee KY, Hart SN, Polley EC, Bakkum-Gamez JN, Couch FJ, Dowdy SC. Cancer susceptibility gene mutations in type I and II endometrial cancer. Gynecol Oncol. 2019;152:20–25. doi: 10.1016/j.ygyno.2018.10.019. PubMed DOI PMC
Ring KL, Bruegl AS, Allen BA, Elkin EP, Singh N, Hartman AR, Daniels MS, Broaddus RR. Germline multi-gene hereditary cancer panel testing in an unselected endometrial cancer cohort. Mod Pathol. 2016;29:1381–1389. doi: 10.1038/modpathol.2016.135. PubMed DOI PMC
Samadder NJ, Riegert-Johnson D, Boardman L, Rhodes D, Wick M, Okuno S, Kunze KL, Golafshar M, Uson PLS, Jr, Mountjoy L, et al. Comparison of universal genetic testing vs guideline-directed targeted testing for patients with hereditary cancer syndrome. JAMA Oncol. 2021;7:230–237. doi: 10.1001/jamaoncol.2020.6252. PubMed DOI PMC
Johnatty SE, Pesaran T, Dolinsky J, Yussuf A, LaDuca H, James PA, O'Mara TA, Spurdle AB. Case-case analysis addressing ascertainment bias for multigene panel testing implicates BRCA1 and PALB2 in endometrial cancer. Hum Mutat. 2021;42:1265–1278. doi: 10.1002/humu.24256. PubMed DOI
Karpel HC, Chern JY, Smith JM, Smith AJ, Pothuri B. Utility of germline multi-gene panel testing in patients with endometrial cancer. Gynecol Oncol. 2022;165:546–551. doi: 10.1016/j.ygyno.2022.04.003. PubMed DOI
Susswein LR, Marshall ML, Nusbaum R, Vogel Postula KJ, Weissman SM, Yackowski L, Vaccari EM, Bissonnette J, Booker JK, Cremona ML, et al. Pathogenic and likely pathogenic variant prevalence among the first 10,000 patients referred for next-generation cancer panel testing. Genet Med. 2016;18:823–832. doi: 10.1038/gim.2015.166. PubMed DOI PMC
Heald B, Mokhtary S, Nielsen SM, Rojahn S, Yang S, Michalski ST, Esplin ED. Unexpected actionable genetic variants revealed by multigene panel testing of patients with uterine cancer. Gynecol Oncol. 2022;166:344–350. doi: 10.1016/j.ygyno.2022.05.023. PubMed DOI
Daniels MS, Lu KH. Genetic predisposition in gynecologic cancers. Semin Oncol. 2016;43:543–547. doi: 10.1053/j.seminoncol.2016.08.005. PubMed DOI
de Jonge MM, de Kroon CD, Jenner DJ, Oosting J, de Hullu JA, Mourits MJE, Gómez Garcia EB, Ausems MGEM, Margriet Collée J, van Engelen K, et al. Endometrial cancer risk in women with germline BRCA1 or BRCA2 mutations: Multicenter cohort study. J Natl Cancer Inst. 2021;113:1203–1211. doi: 10.1093/jnci/djab036. PubMed DOI PMC
Mur P, Garcia-Mulero S, Del Valle J, Magraner-Pardo L, Vidal A, Pineda M, Cinnirella G, Martin-Ramos E, Pons T, López-Doriga A, et al. Role of POLE and POLD1 in familial cancer. Genet Med. 2020;22:2089–2100. doi: 10.1038/s41436-020-0922-2. PubMed DOI PMC
Wieme G, Kral J, Rosseel T, Zemankova P, Parton B, Vocka M, Van Heetvelde M, Kleiblova P, Blaumeiser B, Soukupova J, et al. Prevalence of germline pathogenic variants in cancer predisposing genes in Czech and Belgian pancreatic cancer patients. Cancers (Basel) 2021;13:4430. doi: 10.3390/cancers13174430. PubMed DOI PMC
Lhotova K, Stolarova L, Zemankova P, Vocka M, Janatova M, Borecka M, Cerna M, Jelinkova S, Kral J, Volkova Z, et al. Multigene panel germline testing of 1333 Czech patients with ovarian cancer. Cancers (Basel) 2020;12:956. doi: 10.3390/cancers12040956. PubMed DOI PMC
Soukupova J, Zemankova P, Lhotova K, Janatova M, Borecka M, Stolarova L, Lhota F, Foretova L, Machackova E, Stranecky V, et al. Validation of CZECANCA (CZEch CAncer paNel for clinical application) for targeted NGS-based analysis of hereditary cancer syndromes. PLoS One. 2018;13:e0195761. doi: 10.1371/journal.pone.0195761. PubMed DOI PMC
McKenna A, Hanna M, Banks E, Sivachenko A, Cibulskis K, Kernytsky A, Garimella K, Altshuler D, Gabriel S, Daly M, DePristo MA. The genome analysis toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data. Genome Res. 2010;20:1297–1303. doi: 10.1101/gr.107524.110. PubMed DOI PMC
1000 Genomes Project Consortium, corp-author. Abecasis GR, Auton A, Brooks LD, DePristo MA, Durbin RM, Handsaker RE, Kang HM, Marth GT, McVean GA. An integrated map of genetic variation from 1,092 human genomes. Nature. 2012;491:56–65. doi: 10.1038/nature11632. PubMed DOI PMC
Karczewski KJ, Francioli LC, Tiao G, Cummings BB, Alföldi J, Wang Q, Collins RL, Laricchia KM, Ganna A, Birnbaum DP, et al. The mutational constraint spectrum quantified from variation in 141,456 humans. Nature. 2020;581:434–443. doi: 10.1038/s41586-020-2308-7. PubMed DOI PMC
Exome Variant Server NGESPE, corp-author; Available online:, corp-author http://evs.gs.washington.edu/EVS/ [ March 15; 2022 ];
Landrum MJ, Lee JM, Riley GR, Jang W, Rubinstein WS, Church DM, Maglott DR. ClinVar: Public archive of relationships among sequence variation and human phenotype. Nucleic Acids Res. 2014;42:D980–D985. doi: 10.1093/nar/gkt1113. (Database Issue) PubMed DOI PMC
Miller DT, Lee K, Chung WK, Gordon AS, Herman GE, Klein TE, Stewart DR, Amendola LM, Adelman K, Bale SJ, et al. ACMG SF v3.0 list for reporting of secondary findings in clinical exome and genome sequencing: A policy statement of the American college of medical genetics and genomics (ACMG) Genet Med. 2021;23:1381–1390. doi: 10.1038/s41436-021-01278-8. PubMed DOI
Huang KL, Mashl RJ, Wu Y, Ritter DI, Wang J, Oh C, Paczkowska M, Reynolds S, Wyczalkowski MA, Oak N, et al. Pathogenic germline variants in 10,389 adult cancers. Cell. 2018;173:355–370.e14. doi: 10.1016/j.cell.2018.03.039. PubMed DOI PMC
LaDuca H, Polley EC, Yussuf A, Hoang L, Gutierrez S, Hart SN, Yadav S, Hu C, Na J, Goldgar DE, et al. A clinical guide to hereditary cancer panel testing: Evaluation of gene-specific cancer associations and sensitivity of genetic testing criteria in a cohort of 165,000 high-risk patients. Genet Med. 2020;22:407–415. doi: 10.1038/s41436-019-0633-8. PubMed DOI PMC
Vietri MT, D'Elia G, Caliendo G, Casamassimi A, Federico A, Passariello L, Cioffi M, Molinari AM. Prevalence of mutations in BRCA and MMR genes in patients affected with hereditary endometrial cancer. Med Oncol. 2021;38:13. doi: 10.1007/s12032-021-01454-5. PubMed DOI PMC
Stolarova L, Kleiblova P, Janatova M, Soukupova J, Zemankova P, Macurek L, Kleibl Z. CHEK2 germline variants in cancer predisposition: Stalemate rather than checkmate. Cells. 2020;9:2675. doi: 10.3390/cells9122675. PubMed DOI PMC
Yen TT, Wang TL, Fader AN, Shih IM, Gaillard S. Molecular classification and emerging targeted therapy in endometrial cancer. Int J Gynecol Pathol. 2020;39:26–35. doi: 10.1097/PGP.0000000000000585. PubMed DOI PMC
León-Castillo A, Britton H, McConechy MK, McAlpine JN, Nout R, Kommoss S, Brucker SY, Carlson JW, Epstein E, Rau TT, et al. Interpretation of somatic POLE mutations in endometrial carcinoma. J Pathol. 2020;250:323–335. doi: 10.1002/path.5372. PubMed DOI PMC
Green AK, Feinberg J, Makker V. A review of immune checkpoint blockade therapy in endometrial cancer. Am Soc Clin Oncol Educ Book. 2020;40:1–7. PubMed
Bychkovsky BL, Lo MT, Yussuf A, Horton C, Richardson M, LaDuca H, Garber JE, Rana HQ. Prevalence and spectrum of pathogenic variants among patients with multiple primary cancers evaluated by clinical characteristics. Cancer. 2022;128:1275–1283. doi: 10.1002/cncr.34056. PubMed DOI
Stolarova L, Jelinkova S, Storchova R, Machackova E, Zemankova P, Vocka M, Kodet O, Kral J, Cerna M, Volkova Z, et al. Identification of germline mutations in melanoma patients with early onset, double primary tumors, or family cancer history by NGS analysis of 217 genes. Biomedicines. 2020;8:404. doi: 10.3390/biomedicines8100404. PubMed DOI PMC