A conceptual framework for nomenclatural stability and validity of medically important fungi: a proposed global consensus guideline for fungal name changes supported by ABP, ASM, CLSI, ECMM, ESCMID-EFISG, EUCAST-AFST, FDLC, IDSA, ISHAM, MMSA, and MSGERC
Jazyk angličtina Země Spojené státy americké Médium print-electronic
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
37882528
PubMed Central
PMC10662369
DOI
10.1128/jcm.00873-23
Knihovny.cz E-zdroje
- Klíčová slova
- fungi, nomenclature, taxonomy,
- MeSH
- databáze faktografické MeSH
- fylogeneze MeSH
- houby * genetika MeSH
- lidé MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
The rapid pace of name changes of medically important fungi is creating challenges for clinical laboratories and clinicians involved in patient care. We describe two sources of name change which have different drivers, at the species versus the genus level. Some suggestions are made here to reduce the number of name changes. We urge taxonomists to provide diagnostic markers of taxonomic novelties. Given the instability of phylogenetic trees due to variable taxon sampling, we advocate to maintain genera at the largest possible size. Reporting of identified species in complexes or series should where possible comprise both the name of the overarching species and that of the molecular sibling, often cryptic species. Because the use of different names for the same species will be unavoidable for many years to come, an open access online database of the names of all medically important fungi, with proper nomenclatural designation and synonymy, is essential. We further recommend that while taxonomic discovery continues, the adaptation of new name changes by clinical laboratories and clinicians be reviewed routinely by a standing committee for validation and stability over time, with reference to an open access database, wherein reasons for changes are listed in a transparent way.
Advisory Board of International Commission on the Taxonomy of Fungi
Alberta Precision Laboratories Public Health Laboratory Calgary Alberta Canada
Asia Pacific Society for Medical Mycology
Beth Israel Deaconess Medical Center Boston Massachusetts USA
Center for Innovative Therapeutics and Diagnostics Richmond Virginia USA
Centers for Disease Control and Prevention Atlanta Georgia USA
Cleveland Clinic Lerner College of Medicine Case Western Reserve University Cleveland Ohio USA
Clinical and Laboratory Standards Institute
Clinical Microbiology at The Ohio State University Wexner Medical Center Columbus Ohio USA
Clinical Microbiology Laboratory Wake Forest Baptist Medical Center Winston Salem North Carolina USA
Consejo Nacional de Investigaciones Científicas y Tecnológicas Buenos Aires Argentina
Dartmouth Health Lebanon New Hampshire USA
Department of Basic Pathology Federal University of Paraná Curitiba Brazil
Department of Botany Charles University Prague Czechia
Department of Dermatology and Venereology Peking University 1st Hospital Beijing China
Department of Laboratory Medicine Cleveland Clinic Cleveland Ohio USA
Department of Mycology Centre Hospitalier Universitaire de Rennes Rennes France
Department of Parasitology Institute of Microbiology and Hygiene Humboldt University Berlin Germany
Department of Pathology and Laboratory Medicine London Health Sciences Center London Ontario Canada
Department of Pathology and Laboratory Medicine Weill Cornell Medical College New York USA
Departments of Medicine and Pathology Duke University Durham North Carolina USA
Division of Infectious Diseases Medical University of Graz Graz Austria
Division of Infectious Diseases Mount Auburn Hospital Cambridge Massachusetts USA
European Confederation of Medical Mycology
Foundation Atlas of Clinical Fungi Hilversum the Netherlands
Fungal Diagnostics Laboratory Consortium
General Committee for Nomenclature International Botanical Congress
Hippokration Hospital Thessaloniki Greece
Infection Biology Program Lerner Research Institute Cleveland Clinic Cleveland Ohio USA
Infectious Diseases Society of America
Institute of Hygiene and Medical Microbiology Medical University of Innsbruck Innsbruck Austria
Institute of Microbiology State Key Laboratory of Mycology Chinese Academy of Sciences Beijing China
International Society for Human and Animal Mycology Working Group Nomenclature
ISHAM Working Group on Diagnostics
ISHAM Working Group Veterinary Mycology and One Health
Jilin Agricultural University Chanchung China
Johns Hopkins University School of Medicine Baltimore Maryland USA
Laboratory Diagnostic Center RWTH Aachen University Hospital Aachen Germany
Lewis Katz School of Medicine Temple University Philadelphia Pennsylvania USA
Loyola University Health System Loyola University Chicago Maywood Illinois USA
Mayo Clinic Rochester Minnesota USA
Medical Mycological Society of the Americas
Medical Mycology Society of Chinese Medicine and Education Association
Mycology Committee of Chinese Society for Microbiology
Mycology Reference Laboratory Spanish National Centre for Microbiology Madrid Spain
Mycoses Study Group Education and Research Consortium
National Mycology Reference Laboratory Public Health England Bristol United Kingdom
Natural History Museum London United Kingdom
Nomenclature Committee for Fungi International Mycological Association
Public Health Ontario Toronto Ontario Canada
Public Health Wales Microbiology Cardiff United Kingdom
Radboudumc CWZ Centre of Expertise for Mycology Nijmegen the Netherlands
Research Center for Medical Mycology Peking University Beijing China
Royal Botanic Gardens Kew Richmond Surrey United Kingdom
The American Board of Pathology Tampa Florida USA
Unidad de Parasitología Sector Micología Hospital J M Ramos Mejía Buenos Aires Argentina
University of Alabama at Birmingham Birmingham Alabama USA
University of Maryland School of Medicine Baltimore Maryland USA
University of Pittsburgh Medical Center Pittsburgh Pennsylvania USA
University of Southampton Southampton United Kingdom
University of Texas Health Science Center at Houston Houston Texas USA
University of Texas Health Science Center San Antonio Texas USA
University of Texas Southwestern Medical Center Dallas Texas USA
University of Utah School of Medicine Salt Lake City Utah USA
Vanderbilt University Medical Center Nashville Tennessee USA
Westerdijk Fungal Biodiversity Institute Utrecht The Netherlands
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Redhead SA. 2010. Report on the special committee on the nomenclature of fungi with a pleomorphic life cycle. TAXON 59:1863–1866. doi:10.1002/tax.596017 DOI
Hawksworth DL, Crous PW, Redhead SA, Reynolds DR, Samson RA, Seifert KA, Taylor JW, Wingfield MJ, Abaci O, Aime C, et al. . 2011. The Amsterdam declaration on fungal nomenclature. IMA Fungus 2:105–112. doi:10.5598/imafungus.2011.02.01.14 PubMed DOI PMC
Flann C, Turland NJ, Monro AM. 2014. Report on botanical nomenclature—Melbourne 2011. XVIII international botanical congress, Melbourne: nomenclature section, 18–22 July 2011. PhytoKeys:1–289. doi:10.3897/phytokeys.41.8398 PubMed DOI PMC
McNeill J, Barrie F, Buck W, Demoulin V, We G, Hawksworth D, Herendeen P, Knapp S, Marhold K, Prado J. 2012. International code of nomenclature for algae, fungi and plants (Melbourne code). Vol. 154. Koeltz scientific books, Königstein.
Guarro J, Gené J, Ahmed SA, Al-Hatmi AMS, Figueras MJ, Vitale RG. 2020. Atlas of clinical fungi. 4th ed, p 1599. Foundation Atlas of Clinical Fungi, Hilversum.
Chen M, Zeng J, De Hoog GS, Stielow B, Gerrits Van Den Ende AHG, Liao W, Lackner M. 2016. The ‘species complex’ issue in clinically relevant fungi: a case study in Scedosporium apiospermum. Fungal Biol 120:137–146. doi:10.1016/j.funbio.2015.09.003 PubMed DOI
de Hoog GS, Chaturvedi V, Denning DW, Dyer PS, Frisvad JC, Geiser D, Gräser Y, Guarro J, Haase G, Kwon-Chung K-J, Meis JF, Meyer W, Pitt JI, Samson RA, Taylor JW, Tintelnot K, Vitale RG, Walsh TJ, Lackner M, ISHAM Working Group on Nomenclature of Medical Fungi . 2015. Name changes in medically important fungi and their implications for clinical practice. J Clin Microbiol 53:1056–1062. doi:10.1128/JCM.02016-14 PubMed DOI PMC
de Hoog GS, Haase G, Chaturvedi V, Walsh TJ, Meyer W, Lackner M. 2013. Taxonomy of medically important fungi in the molecular era. Lancet Infect Dis 13:385–386. doi:10.1016/S1473-3099(13)70058-6 PubMed DOI
Kwon-Chung KJ, Bennett JE, Wickes BL, Meyer W, Cuomo CA, Wollenburg KR, Bicanic TA, Castañeda E, Chang YC, Chen J, et al. . 2017. The case for adopting the “species complex” nomenclature for the etiologic agents of cryptococcosis. mSphere 2:e00357-16. doi:10.1128/mSphere.00357-16 PubMed DOI PMC
Yurkov A, Alves A, Bai F-Y, Boundy-Mills K, Buzzini P, Čadež N, Cardinali G, Casaregola S, Chaturvedi V, Collin V, et al. . 2021. Nomenclatural issues concerning cultured yeasts and other fungi: why it is important to avoid unneeded name changes. IMA Fungus 12:18. doi:10.1186/s43008-021-00067-x PubMed DOI PMC
Borman AM, Johnson EM. 2021. Name changes for fungi of medical importance, 2018 to 2019. J Clin Microbiol 59:e01811-20. doi:10.1128/JCM.01811-20 PubMed DOI PMC
Kidd SE, Abdolrasouli A, Hagen F. 2023. Fungal nomenclature: managing change is the name of the game. Oxford University Press, USA. PubMed PMC
Kidd SE, Halliday CL, McMullan B, Chen S-A, Elvy J. 2021. New names for fungi of medical importance: can we have our cake and eat it too. J Clin Microbiol 59:e02730-20. doi:10.1128/JCM.02730-20 PubMed DOI PMC
Schoch CL, Sung G-H, López-Giráldez F, Townsend JP, Miadlikowska J, Hofstetter V, Robbertse B, Matheny PB, Kauff F, Wang Z, Gueidan C, et al. . 2009. The ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits. Syst Biol 58:224–239. doi:10.1093/sysbio/syp020 PubMed DOI
Samson RA, Yilmaz N, Houbraken J, Spierenburg H, Seifert KA, Peterson SW, Varga J, Frisvad JC. 2011. Phylogeny and nomenclature of the genus Talaromyces and taxa accommodated in Penicillium subgenus Biverticillium. Stud Mycol 70:159–183. doi:10.3114/sim.2011.70.04 PubMed DOI PMC
de Hoog GS, Dukik K, Monod M, Packeu A, Stubbe D, Hendrickx M, Kupsch C, Stielow JB, Freeke J, Göker M, Rezaei-Matehkolaei A, Mirhendi H, Gräser Y. 2017. Toward a novel multilocus phylogenetic taxonomy for the dermatophytes. Mycopathologia 182:5–31. doi:10.1007/s11046-016-0073-9 PubMed DOI PMC
Weijman AC. 1979. Carbohydrate composition and taxonomy of Geotrichum, Trichosporon and allied genera. Antonie Van Leeuwenhoek 45:119–127. doi:10.1007/BF00400785 PubMed DOI
de Beer ZW, Begerow D, Bauer R, Pegg GS, Crous PW, Wingfield MJ. 2006. Phylogeny of the Quambalariaceae fam. nov., including important eucalyptus pathogens in South Africa and Australia. Stud Mycol 55:289–298. doi:10.3114/sim.55.1.289 PubMed DOI PMC
Sugita R, Tanaka K. 2022. Thyridium revised: synonymisation of Phialemoniopsis under Thyridium and establishment of a new order, thyridiales. MycoKeys 86:147–176. doi:10.3897/mycokeys.86.78989 PubMed DOI PMC
Connally A, Smith D, Marek S, Wu Y, Walker N. 2022. Phylogenetic evaluation of Bipolaris and Curvularia species collected from turfgrasses. Int Turfgrass Soc Res J 14:916–930. doi:10.1002/its2.16 DOI
Manamgoda DS, Cai L, McKenzie EHC, Crous PW, Madrid H, Chukeatirote E, Shivas RG, Tan YP, Hyde KD. 2012. A phylogenetic and taxonomic re-evaluation of the Bipolaris-Cochliobolus-Curvularia complex. Fungal Div 56:131–144. doi:10.1007/s13225-012-0189-2 DOI
Wang XW, Houbraken J, Groenewald JZ, Meijer M, Andersen B, Nielsen KF, Crous PW, Samson RA. 2016. Diversity and taxonomy of Chaetomium and chaetomium-like fungi from indoor environments. Stud Mycol 84:145–224. doi:10.1016/j.simyco.2016.11.005 PubMed DOI PMC
Zachos FE. 2016. Species concepts in biology. Vol. 801. Springer. doi:10.1007/978-3-319-44966-1 DOI
Anzawa K, Kawasaki M, Mochizuki T, Ishizaki H. 2010. Successful mating of trichophyton rubrum with Arthroderma simii. Med Mycol 48:629–634. doi:10.3109/13693780903437884 PubMed DOI
Hubka V, Barrs V, Dudová Z, Sklenář F, Kubátová A, Matsuzawa T, Yaguchi T, Horie Y, Nováková A, Frisvad JC, Talbot JJ, Kolařík M. 2018. Unravelling species boundaries in the Aspergillus viridinutans complex (section Fumigati): opportunistic human and animal pathogens capable of interspecific hybridization. Persoonia 41:142–174. doi:10.3767/persoonia.2018.41.08 PubMed DOI PMC
Hartmann FE, Duhamel M, Carpentier F, Hood ME, Foulongne-Oriol M, Silar P, Malagnac F, Grognet P, Giraud T. 2021. Recombination suppression and evolutionary strata around mating‐type loci in fungi: documenting patterns and understanding evolutionary and mechanistic causes. New Phytol 229:2470–2491. doi:10.1111/nph.17039 PubMed DOI PMC
Yadav V, Sun S, Heitman J. 2021. Uniparental nuclear inheritance following bisexual mating in fungi. Elife 10:e66234. doi:10.7554/eLife.66234 PubMed DOI PMC
Zhao L, de Hoog S, Hagen F, Kang Y, Al-Hatmi AMS. 2019. Species borderlines in Fusarium exemplified by F. circinatum/F. subglutinans. Fungal Genet Biol 132:103262. doi:10.1016/j.fgb.2019.103262 PubMed DOI
Samarasinghe H, Xu J. 2018. Hybrids and hybridization in the Cryptococcus neoformans and Cryptococcus gattii species complexes. Infect Genet Evol 66:245–255. doi:10.1016/j.meegid.2018.10.011 PubMed DOI
Samarasinghe H, You M, Jenkinson TS, Xu J, James TY. 2020. Hybridization facilitates adaptive evolution in two major fungal pathogens. Genes 11:101. doi:10.3390/genes11010101 PubMed DOI PMC
Wilson AM, Wilken PM, van der Nest MA, Steenkamp ET, Wingfield MJ, Wingfield BD. 2015. Homothallism: an umbrella term for describing diverse sexual behaviours. IMA Fungus 6:207–214. doi:10.5598/imafungus.2015.06.01.13 PubMed DOI PMC
Stielow JB, Lévesque CA, Seifert KA, Meyer W, Iriny L, Smits D, Renfurm R, Verkley GJM, Groenewald M, Chaduli D, et al. . 2015. One fungus, which genes? Development and assessment of universal primers for potential secondary fungal DNA barcodes. Persoonia 35:242–263. doi:10.3767/003158515X689135 PubMed DOI PMC
Sandoval-Denis M, Sutton DA, Martin-Vicente A, Cano-Lira JF, Wiederhold N, Guarro J, Gené J. 2015. Cladosporium species recovered from clinical samples in the United States. J Clin Microbiol 53:2990–3000. doi:10.1128/JCM.01482-15 PubMed DOI PMC
Wang MM, Crous PW, Sandoval-Denis M, Han SL, Liu F, Liang JM, Duan WJ, Cai L. 2022. Fusarium and allied genera from China: species diversity and distribution. Persoonia 48:1–53. doi:10.3767/persoonia.2022.48.01 PubMed DOI PMC
Hudson O, Waliullah S, Fulton JC, Ji P, Dufault NS, Keinath A, Ali ME. 2021. Marker development for differentiation of Fusarium oxysporum f. sp. niveum race 3 from races 1 and 2. Int J Molec Sci 22:822. doi:10.3390/ijms22020822 PubMed DOI PMC
Vlaardingerbroek I, Beerens B, Schmidt SM, Cornelissen BJC, Rep M. 2016. Dispensable chromosomes in Fusarium oxysporum f. sp. lycopersici. Mol Plant Pathol 17:1455–1466. doi:10.1111/mpp.12440 PubMed DOI PMC
Esposto MC, Prigitano A, Tortorano AM. 2016. Fusarium musae as cause of superficial and deep-seated human infections. J Mycol Med 26:403–405. doi:10.1016/j.mycmed.2016.02.021 PubMed DOI
Thitla T, Kumla J, Khuna S, Lumyong S, Suwannarach N. 2022. Species diversity, distribution, and phylogeny of Exophiala with the addition of four new species from Thailand. J Fungi 8:766. doi:10.3390/jof8080766 PubMed DOI PMC
Verbeke V, Bourgeois T, Lodewyck T, Van Praet J, Lagrou K, Reynders M, Nulens E. 2020. Successful outcome of disseminated Fusarium musae fungemia with skin localization treated with liposomal amphotericin B and voriconazole in a patient with acute myeloid leukemia. Mycopathologia 185:1085–1089. doi:10.1007/s11046-020-00499-w PubMed DOI
Gräser Y, De Hoog S, Summerbell RC. 2006. Dermatophytes: recognizing species of clonal fungi. Med Mycol 44:199–209. doi:10.1080/13693780600606810 PubMed DOI
Taylor JW, Jacobson DJ, Kroken S, Kasuga T, Geiser DM, Hibbett DS, Fisher MC. 2000. Phylogenetic species recognition and species concepts in fungi. Fungal Genet Biol 31:21–32. doi:10.1006/fgbi.2000.1228 PubMed DOI
Kandemir H, Dukik K, Hagen F, Ilkit M, de Hoog G. 2019. A Polyphasic approach for the differentiation Trichophyton tonsurans and T. Equinum. Mycopathologia 185:113–122. PubMed
Kosanke S, Hamann L, Kupsch C, Moreno Garcia S, Chopra A, Gräser Y. 2018. Unequal distribution of the mating type (MAT) locus idiomorphs in dermatophyte species. Fungal Genet Biol 118:45–53. doi:10.1016/j.fgb.2018.07.003 PubMed DOI
Taghipour S, Pchelin IM, Zarei Mahmoudabadi A, Ansari S, Katiraee F, Rafiei A, Shokohi T, Abastabar M, Taraskina AE, Kermani F, Diba K, Nouripour-Sisakht S, Najafzadeh MJ, Pakshir K, Zomorodian K, Ahmadikia K, Rezaei-Matehkolaei A. 2019. Trichophyton mentagrophytes and T interdigitale genotypes are associated with particular geographic areas and clinical manifestations. Mycoses 62:1084–1091. doi:10.1111/myc.12993 PubMed DOI
Kuramae EE, Robert V, Echavarri-Erasun C, Boekhout T. 2007. Cophenetic correlation analysis as a strategy to select phylogenetically informative proteins: an example from the fungal kingdom. BMC Evol Biol 7:134. doi:10.1186/1471-2148-7-134 PubMed DOI PMC
van Dam P, de Sain M, Ter Horst A, van der Gragt M, Rep M. 2018. Use of comparative genomics-based markers for discrimination of host specificity in Fusarium oxysporum. Appl Environ Microbiol 84:e01868-17. doi:10.1128/AEM.01868-17 PubMed DOI PMC
Vilela R, de Hoog S, Bensch K, Bagagli E, Mendoza L. 2023. A taxonomic review of the genus Paracoccidioides, with focus on the uncultivable species. PLOS Negl Trop Dis 17:e0011220. doi:10.1371/journal.pntd.0011220 PubMed DOI PMC
Tang C, Ahmed SA, Deng S, Zhang L, Zoll J, Al-Hatmi AMS, Meis JF, Thakur R, Kang Y, de Hoog GS. 2022. Detection of emerging genotypes in Trichophyton mentagrophytes species complex: a proposal for handling biodiversity in dermatophytes. Front Microbiol 13:960190. doi:10.3389/fmicb.2022.960190 PubMed DOI PMC
James TY, Stajich JE, Hittinger CT, Rokas A. 2020. Toward a fully resolved fungal tree of life. Annu Rev Microbiol 74:291–313. doi:10.1146/annurev-micro-022020-051835 PubMed DOI
Sandoval-Denis M, Gené J, Sutton DA, Cano-Lira JF, de Hoog GS, Decock CA, Wiederhold NP, Guarro J. 2016. Redefining Microascus, Scopulariopsis and allied genera. Persoonia 36:1–36. doi:10.3767/003158516X688027 PubMed DOI PMC
Kocsubé S, Perrone G, Magistà D, Houbraken J, Varga J, Szigeti G, Hubka V, Hong S-B, Frisvad JC, Samson RA. 2016. Aspergillus is monophyletic: evidence from multiple gene phylogenies and extrolites profiles. Stud Mycol 85:199–213. doi:10.1016/j.simyco.2016.11.006 PubMed DOI PMC
Houbraken J, Kocsubé S, Visagie CM, Yilmaz N, Wang X-C, Meijer M, Kraak B, Hubka V, Bensch K, Samson RA, Frisvad JC. 2020. Classification of Aspergillus, Penicillium, Talaromyces and related genera (Eurotiales): an overview of families, genera, subgenera, sections, series and species. Stud Mycol 95:5–169. doi:10.1016/j.simyco.2020.05.002 PubMed DOI PMC
Quan Y, Muggia L, Moreno LF, Wang M, Al-Hatmi AMS, da Silva Menezes N, Shi D, Deng S, Ahmed S, Hyde KD, Vicente VA, Kang Y, Stielow JB, de Hoog S. 2020. A re-evaluation of the Chaetothyriales using criteria of comparative biology. Fungal Div 103:47–85. doi:10.1007/s13225-020-00452-8 DOI
Lücking R, Aime MC, Robbertse B, Miller AN, Ariyawansa HA, Aoki T, Cardinali G, Crous PW, Druzhinina IS, Geiser DM, et al. . 2020. Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding? IMA Fungus 11:14. doi:10.1186/s43008-020-00033-z PubMed DOI PMC
Lücking R, Aime MC, Robbertse B, Miller AN, Aoki T, Ariyawansa HA, Cardinali G, Crous PW, Druzhinina IS, Geiser DM, et al. . 2021. Fungal taxonomy and sequence-based nomenclature. Nat Microbiol 6:971. doi:10.1038/s41564-021-00921-z PubMed DOI
Redhead SA. 2001. Bully for Coprinus – a story of manure, minutiae and molecules. Field Mycol 2:118–126. doi:10.1016/S1468-1641(10)60532-4 DOI
Bian C, Kusuya Y, Sklenář F, D’hooge E, Yaguchi T, Ban S, Visagie C, Houbraken J, Takahashi H, Hubka V. 2022. Reducing the number of accepted species in Aspergillus series Nigri. Stud Mycol 102:95–132. doi:10.3114/sim.2022.102.03 PubMed DOI PMC
Sklenář F, Glässnerová K, Jurjević Ž, Houbraken J, Samson RA, Visagie CM, Yilmaz N, Gené J, Cano J, Chen AJ, Nováková A, Yaguchi T, Kolařík M, Hubka V. 2022. Taxonomy of Aspergillus series Versicolores: species reduction and lessons learned about intraspecific variability. Stud Mycol 102:53–93. doi:10.3114/sim.2022.102.02 PubMed DOI PMC
Hagen F, Lumbsch HT, Arsic Arsenijevic V, Badali H, Bertout S, Billmyre RB, Bragulat MR, Cabañes FJ, Carbia M, Chakrabarti A, et al. . 2017. Importance of resolving fungal nomenclature: the case of multiple pathogenic species in the Cryptococcus genus. mSphere 2:e00238-17. doi:10.1128/mSphere.00238-17 PubMed DOI PMC
Crous PW, Lombard L, Sandoval-Denis M, Seifert KA, Schroers H-J, Chaverri P, Gené J, Guarro J, Hirooka Y, Bensch K, Kema GHJ, et al. . 2021. Fusarium: more than a node or a foot-shaped basal cell. Stud Mycol 98:100116. doi:10.1016/j.simyco.2021.100116 PubMed DOI PMC
Geiser DM, Al-Hatmi AMS, Aoki T, Arie T, Balmas V, Barnes I, Bergstrom GC, Bhattacharyya MK, Blomquist CL, Bowden RL, et al. . 2021. Phylogenomic analysis of a 55.1-kb 19-gene dataset resolves a monophyletic Fusarium that includes the Fusarium solani species complex. Phytopathology 111:1064–1079. doi:10.1094/PHYTO-08-20-0330-LE PubMed DOI
Geiser DM, Aoki T, Bacon CW, Baker SE, Bhattacharyya MK, Brandt ME, Brown DW, Burgess LW, Chulze S, Coleman JJ, et al. . 2013. One fungus, one name: defining the genus Fusarium in a scientifically robust way that preserves longstanding use. Phytopathology 103:400–408. doi:10.1094/PHYTO-07-12-0150-LE PubMed DOI
O’Donnell K, Al-Hatmi AMS, Aoki T, Brankovics B, Cano-Lira JF, Coleman JJ, de Hoog GS, Di Pietro A, Frandsen RJN, Geiser DM, et al. . 2020. No to Neocosmospora: phylogenomic and practical reasons for continued inclusion of the Fusarium solani species complex in the genus Fusarium. mSphere 5:e00810-20. doi:10.1128/mSphere.00810-20 PubMed DOI PMC
May TW, Redhead SA, Bensch K, Hawksworth DL, Lendemer J, Lombard L, Turland NJ. 2019. Chapter F of the International Code of Nomenclature for algae, fungi, and plants as approved by the 11th International mycological Congress, San Juan, Puerto Rico, July 2018. IMA Fungus 10:21. doi:10.1186/s43008-019-0019-1 PubMed DOI PMC
Turland N, Wiersema J, Barrie F, Greuter W, Hawksworth D, Herendeen P, Knapp S, Kusber W-H, Li D-Z, Marhold K, May T, McNeill J, Monro A, Prado J, Price M, Smith G. 2018. Adopted by the Nineteenth International Botanical Congress. International code of nomenclature for algae, fungi, and plants (shenzhen code). Koeltz Botanical Books, Shenzhen, China. doi:10.12705/Code.2018 DOI