-
Je něco špatně v tomto záznamu ?
Old AIMs of the exocyst: evidence for an ancestral association of exocyst subunits with autophagy-associated Atg8 proteins
F. Cvrčková, V. Zárský,
Jazyk angličtina Země Spojené státy americké
Typ dokumentu časopisecké články, práce podpořená grantem
NLK
Free Medical Journals
od 2006 do Před 1 rokem
PubMed Central
od 2006 do Před 1 rokem
Europe PubMed Central
od 2006 do Před 1 rokem
Medline Complete (EBSCOhost)
od 2011-01-01 do 2015-06-30
ROAD: Directory of Open Access Scholarly Resources
od 2006
PubMed
24305598
DOI
10.4161/psb.27099
Knihovny.cz E-zdroje
- MeSH
- aminokyselinové motivy MeSH
- Arabidopsis cytologie metabolismus MeSH
- autofagie * MeSH
- fylogeneze MeSH
- podjednotky proteinů chemie metabolismus MeSH
- rostlinné proteiny chemie metabolismus MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
In a recent addendum, Oren Tzfadia and Gad Galili (PSB 2014; 9:e26732) showed that several Arabidopsis exocyst subunits possess consensus Atg8-interacting motifs (AIMs), which may mediate their interaction with the autophagy-associated Atg8 protein, providing thus a mechanistic base for participation of exocyst (sub)complexes in autophagy. However, the bioinformatically identified AIMs are short peptide motifs that may occur by chance. We thus performed an exhaustive search in a large collection of plant exocyst-derived sequences from our previous bioinformatic study and found that AIMs are over-represented among exocyst subunits of all lineages examined, including moss and club moss, compared with a representative sample of the Arabidopsis proteome. This is consistent with the proposed exocyst AIMs being biologically meaningful and evolutionarily ancient. Moreover, among the numerous EXO70 paralogs, the monocot-specific EXO70F clade appears to be exempt from the general AIM enrichment, suggesting a modification of the autophagy connection in a subset of exocyst variants.
Citace poskytuje Crossref.org
- 000
- 00000naa a2200000 a 4500
- 001
- bmc15008482
- 003
- CZ-PrNML
- 005
- 20150331115104.0
- 007
- ta
- 008
- 150306s2013 xxu f 000 0|eng||
- 009
- AR
- 024 7_
- $a 10.4161/psb.27099 $2 doi
- 035 __
- $a (PubMed)24305598
- 040 __
- $a ABA008 $b cze $d ABA008 $e AACR2
- 041 0_
- $a eng
- 044 __
- $a xxu
- 100 1_
- $a Cvrčková, Fatima $u Department of Experimental Plant Biology; Faculty of Science; Charles University; Prague, Czech Republic.
- 245 10
- $a Old AIMs of the exocyst: evidence for an ancestral association of exocyst subunits with autophagy-associated Atg8 proteins / $c F. Cvrčková, V. Zárský,
- 520 9_
- $a In a recent addendum, Oren Tzfadia and Gad Galili (PSB 2014; 9:e26732) showed that several Arabidopsis exocyst subunits possess consensus Atg8-interacting motifs (AIMs), which may mediate their interaction with the autophagy-associated Atg8 protein, providing thus a mechanistic base for participation of exocyst (sub)complexes in autophagy. However, the bioinformatically identified AIMs are short peptide motifs that may occur by chance. We thus performed an exhaustive search in a large collection of plant exocyst-derived sequences from our previous bioinformatic study and found that AIMs are over-represented among exocyst subunits of all lineages examined, including moss and club moss, compared with a representative sample of the Arabidopsis proteome. This is consistent with the proposed exocyst AIMs being biologically meaningful and evolutionarily ancient. Moreover, among the numerous EXO70 paralogs, the monocot-specific EXO70F clade appears to be exempt from the general AIM enrichment, suggesting a modification of the autophagy connection in a subset of exocyst variants.
- 650 _2
- $a aminokyselinové motivy $7 D020816
- 650 _2
- $a Arabidopsis $x cytologie $x metabolismus $7 D017360
- 650 12
- $a autofagie $7 D001343
- 650 _2
- $a fylogeneze $7 D010802
- 650 _2
- $a rostlinné proteiny $x chemie $x metabolismus $7 D010940
- 650 _2
- $a podjednotky proteinů $x chemie $x metabolismus $7 D021122
- 655 _2
- $a časopisecké články $7 D016428
- 655 _2
- $a práce podpořená grantem $7 D013485
- 700 1_
- $a Zárský, Viktor $u Department of Experimental Plant Biology; Faculty of Science; Charles University; Prague, Czech Republic.
- 773 0_
- $w MED00181062 $t Plant signaling & behavior $x 1559-2324 $g Roč. 8, č. 11 (2013), s. e27099
- 856 41
- $u https://pubmed.ncbi.nlm.nih.gov/24305598 $y Pubmed
- 910 __
- $a ABA008 $b sig $c sign $y a $z 0
- 990 __
- $a 20150306 $b ABA008
- 991 __
- $a 20150331115334 $b ABA008
- 999 __
- $a ok $b bmc $g 1065755 $s 891282
- BAS __
- $a 3
- BAS __
- $a PreBMC
- BMC __
- $a 2013 $b 8 $c 11 $d e27099 $i 1559-2324 $m Plant signaling & behavior $n Plant signal. behav. $x MED00181062
- LZP __
- $a Pubmed-20150306