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Detection of rat hepatitis E virus in wild Norway rats (Rattus norvegicus) and Black rats (Rattus rattus) from 11 European countries
R. Ryll, S. Bernstein, E. Heuser, M. Schlegel, P. Dremsek, M. Zumpe, S. Wolf, M. Pépin, D. Bajomi, G. Müller, AC. Heiberg, C. Spahr, J. Lang, MH. Groschup, H. Ansorge, J. Freise, S. Guenther, K. Baert, F. Ruiz-Fons, J. Pikula, N. Knap, Ι....
Jazyk angličtina Země Nizozemsko
Typ dokumentu časopisecké články
- MeSH
- divoká zvířata MeSH
- druhová specificita MeSH
- fylogeneze MeSH
- hepatitida E epidemiologie veterinární virologie MeSH
- hustota populace MeSH
- krysa rodu rattus MeSH
- lidé MeSH
- rozšíření zvířat MeSH
- virus hepatitidy E klasifikace genetika izolace a purifikace MeSH
- zvířata MeSH
- Check Tag
- krysa rodu rattus MeSH
- lidé MeSH
- mužské pohlaví MeSH
- ženské pohlaví MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- Geografické názvy
- Evropa epidemiologie MeSH
Rat hepatitis E virus (HEV) is genetically only distantly related to hepeviruses found in other mammalian reservoirs and in humans. It was initially detected in Norway rats (Rattus norvegicus) from Germany, and subsequently in rats from Vietnam, the USA, Indonesia, China, Denmark and France. Here, we report on a molecular survey of Norway rats and Black rats (Rattus rattus) from 12 European countries for ratHEV and human pathogenic hepeviruses. RatHEV-specific real-time and conventional RT-PCR investigations revealed the presence of ratHEV in 63 of 508 (12.4%) rats at the majority of sites in 11 of 12 countries. In contrast, a real-time RT-PCR specific for human pathogenic HEV genotypes 1-4 and a nested broad-spectrum (NBS) RT-PCR with subsequent sequence determination did not detect any infections with these genotypes. Only in a single Norway rat from Belgium a rabbit HEV-like genotype 3 sequence was detected. Phylogenetic analysis indicated a clustering of all other novel Norway and Black rat-derived sequences with ratHEV sequences from Europe, the USA and a Black rat-derived sequence from Indonesia within the proposed ratHEV genotype 1. No difference in infection status was detected related to age, sex, rat species or density of human settlements and zoological gardens. In conclusion, our investigation shows a broad geographical distribution of ratHEV in Norway and Black rats from Europe and its presence in all settlement types investigated.
AC Heiberg Rådgivning Åmosevej 69 Skellingsted 4440 Mørkøv Denmark
Bábolna Bio Ltd Szállás u 6 H 1107 Budapest Hungary
German Center for Infection Research Partner Site Hamburg Luebeck Borstel Insel Riems Germany
German Federal Institute for Risk Assessment Max Dohrn Str 8 10 10589 Berlin Germany
Institute for Microbiology Technische Universität Dresden Zellescher Weg 20b 01217 Dresden Germany
Institute of Microbiology and Immunology Faculty of Medicine Zaloška 4 1000 Ljubljana Slovenia
Research Institute for Nature and Forest Research Group Wildlife Management Brussels Belgium
Senckenberg Museum of Natural History Am Museum 1 02826 Görlitz Germany
Spanish Wildlife Research Institute IREC Ronda de Toledo 12 13071 Ciudad Real Spain
Stadt Zürich Umwelt und Gesundheitsschutz Zürich Walchestrasse 31 8021 Zürich Switzerland
Swiss Institute of Bioinformatics Quartier Sorge Batiment Genopode 1015 Lausanne Switzerland
Università degli Studi di Torino Dipartimento di Scienze Veterinarie Largo Paolo Braccini 2 Italy
University of Bern Institute of Ecology and Evolution Baltzerstrasse 6 3012 Bern Switzerland
VetagroSup Université Lyon1 CIRI Equipe VIRPATH 1 avenue Bourgelat 69280 Marcy l'étoile France
Citace poskytuje Crossref.org
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- $a Rat hepatitis E virus (HEV) is genetically only distantly related to hepeviruses found in other mammalian reservoirs and in humans. It was initially detected in Norway rats (Rattus norvegicus) from Germany, and subsequently in rats from Vietnam, the USA, Indonesia, China, Denmark and France. Here, we report on a molecular survey of Norway rats and Black rats (Rattus rattus) from 12 European countries for ratHEV and human pathogenic hepeviruses. RatHEV-specific real-time and conventional RT-PCR investigations revealed the presence of ratHEV in 63 of 508 (12.4%) rats at the majority of sites in 11 of 12 countries. In contrast, a real-time RT-PCR specific for human pathogenic HEV genotypes 1-4 and a nested broad-spectrum (NBS) RT-PCR with subsequent sequence determination did not detect any infections with these genotypes. Only in a single Norway rat from Belgium a rabbit HEV-like genotype 3 sequence was detected. Phylogenetic analysis indicated a clustering of all other novel Norway and Black rat-derived sequences with ratHEV sequences from Europe, the USA and a Black rat-derived sequence from Indonesia within the proposed ratHEV genotype 1. No difference in infection status was detected related to age, sex, rat species or density of human settlements and zoological gardens. In conclusion, our investigation shows a broad geographical distribution of ratHEV in Norway and Black rats from Europe and its presence in all settlement types investigated.
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