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Whole-Exome Sequencing Identifies a Novel Germline Variant in PTK7 Gene in Familial Colorectal Cancer
B. Miao, D. Skopelitou, A. Srivastava, S. Giangiobbe, D. Dymerska, N. Paramasivam, A. Kumar, M. Kuświk, W. Kluźniak, K. Paszkowska-Szczur, M. Schlesner, J. Lubinski, K. Hemminki, A. Försti, OR. Bandapalli
Jazyk angličtina Země Švýcarsko
Typ dokumentu časopisecké články
Grantová podpora
856620
EU Horizon 2020
CA17118
European Cooperation in Science and Technology
NLK
Free Medical Journals
od 2000
Freely Accessible Science Journals
od 2000
PubMed Central
od 2007
Europe PubMed Central
od 2007
ProQuest Central
od 2000-03-01
Open Access Digital Library
od 2000-01-01
Open Access Digital Library
od 2007-01-01
Health & Medicine (ProQuest)
od 2000-03-01
ROAD: Directory of Open Access Scholarly Resources
od 2000
PubMed
35163215
DOI
10.3390/ijms23031295
Knihovny.cz E-zdroje
- MeSH
- genetická predispozice k nemoci MeSH
- inhibitor p21 cyklin-dependentní kinasy genetika MeSH
- invazivní růst nádoru genetika MeSH
- kolorektální nádory genetika patologie MeSH
- lidé středního věku MeSH
- lidé MeSH
- molekuly buněčné adheze genetika metabolismus MeSH
- nádorový supresorový protein p53 genetika MeSH
- onkogeny MeSH
- pohyb buněk genetika MeSH
- proliferace buněk genetika MeSH
- protein vázající cAMP responzivní element genetika MeSH
- protoonkogenní proteiny c-akt genetika MeSH
- rodina MeSH
- rodokmen MeSH
- sekvenování exomu metody MeSH
- senioři MeSH
- tyrosinkinasové receptory genetika metabolismus MeSH
- zárodečné mutace genetika MeSH
- Check Tag
- lidé středního věku MeSH
- lidé MeSH
- mužské pohlaví MeSH
- senioři MeSH
- ženské pohlaví MeSH
- Publikační typ
- časopisecké články MeSH
Colorectal cancer (CRC) is the third most frequently diagnosed malignancy worldwide. Only 5% of all CRC cases are due to germline mutations in known predisposition genes, and the remaining genetic burden still has to be discovered. In this study, we performed whole-exome sequencing on six members of a Polish family diagnosed with CRC and identified a novel germline variant in the protein tyrosine kinase 7 (inactive) gene (PTK7, ENST00000230419, V354M). Targeted screening of the variant in 1705 familial CRC cases and 1674 healthy elderly individuals identified the variant in an additional familial CRC case. Introduction of this variant in HT-29 cells resulted in increased cell proliferation, migration, and invasion; it also caused down-regulation of CREB, p21 and p53 mRNA and protein levels, and increased AKT phosphorylation. These changes indicated inhibition of apoptosis pathways and activation of AKT signaling. Our study confirmed the oncogenic function of PTK7 and supported its role in genetic predisposition of familial CRC.
Bioinformatics and Omics Data Analytics German Cancer Research Center 69120 Heidelberg Germany
Department of Genetics and Pathology Pomeranian Medical University 71252 Szczecin Poland
Division of Pediatric Neurooncology German Cancer Research Center 69120 Heidelberg Germany
Hopp Children's Cancer Center 69120 Heidelberg Germany
Institute of Bioinformatics International Technology Park Bengaluru 560066 India
Manipal Academy of Higher Education Manipal 576104 India
Medical Faculty Heidelberg Heidelberg University 69120 Heidelberg Germany
Molecular Genetic Epidemiology German Cancer Research Center 69120 Heidelberg Germany
Citace poskytuje Crossref.org
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