Detail
Článek
Článek online
FT
Medvik - BMČ
  • Je něco špatně v tomto záznamu ?

Accounting for EGFR Mutations in Epidemiologic Analyses of Non-Small Cell Lung Cancers: Examples Based on the International Lung Cancer Consortium Data

S. Schmid, M. Jiang, MC. Brown, A. Fares, M. Garcia, J. Soriano, M. Dong, S. Thomas, T. Kohno, LF. Leal, N. Diao, J. Xie, Z. Wang, D. Zaridze, I. Holcatova, J. Lissowska, B. Świątkowska, D. Mates, M. Savic, AS. Wenzlaff, CC. Harris, NE. Caporaso,...

. 2022 ; 31 (3) : 679-687. [pub] 2022Mar01

Jazyk angličtina Země Spojené státy americké

Typ dokumentu časopisecké články, Research Support, N.I.H., Extramural, práce podpořená grantem

Perzistentní odkaz   https://www.medvik.cz/link/bmc22019251

Grantová podpora
U01 CA063673 NCI NIH HHS - United States
U01 CA167462 NCI NIH HHS - United States
P30 CA076292 NCI NIH HHS - United States
U01-CA063673 NIH HHS - United States
U01 CA209414 NCI NIH HHS - United States
UM1 CA167462 NCI NIH HHS - United States

BACKGROUND: Somatic EGFR mutations define a subset of non-small cell lung cancers (NSCLC) that have clinical impact on NSCLC risk and outcome. However, EGFR-mutation-status is often missing in epidemiologic datasets. We developed and tested pragmatic approaches to account for EGFR-mutation-status based on variables commonly included in epidemiologic datasets and evaluated the clinical utility of these approaches. METHODS: Through analysis of the International Lung Cancer Consortium (ILCCO) epidemiologic datasets, we developed a regression model for EGFR-status; we then applied a clinical-restriction approach using the optimal cut-point, and a second epidemiologic, multiple imputation approach to ILCCO survival analyses that did and did not account for EGFR-status. RESULTS: Of 35,356 ILCCO patients with NSCLC, EGFR-mutation-status was available in 4,231 patients. A model regressing known EGFR-mutation-status on clinical and demographic variables achieved a concordance index of 0.75 (95% CI, 0.74-0.77) in the training and 0.77 (95% CI, 0.74-0.79) in the testing dataset. At an optimal cut-point of probability-score = 0.335, sensitivity = 69% and specificity = 72.5% for determining EGFR-wildtype status. In both restriction-based and imputation-based regression analyses of the individual roles of BMI on overall survival of patients with NSCLC, similar results were observed between overall and EGFR-mutation-negative cohort analyses of patients of all ancestries. However, our approach identified some differences: EGFR-mutated Asian patients did not incur a survival benefit from being obese, as observed in EGFR-wildtype Asian patients. CONCLUSIONS: We introduce a pragmatic method to evaluate the potential impact of EGFR-status on epidemiological analyses of NSCLC. IMPACT: The proposed method is generalizable in the common occurrence in which EGFR-status data are missing.

Affiliated Hospital of Nanjing University of Chinese Medicine Nanjing China

American Cancer Society Atlanta Georgia

Barbara Ann Karmanos Cancer Institute Wayne State University Detroit Michigan

Bellvitge Biomedical Research Institute L'Hospitalet de Llobregat Barcelona Spain

Catalan Institute of Oncology Barcelona Spain

CIBER de Epidemiología y Salud Pública CIBERESP Santiago de Compostela Galicia Spain

Dalla Lana School of Public Health University of Toronto Toronto Ontario Canada

Dartmouth Hitchcock Medical Center Lebanon New Hampshire

Department of Cancer Epidemiology and Prevention M Sklodowska Curie National Research Institute of Oncology Warsaw Poland

Department of Cancer Epidemiology H Lee Moffitt Cancer Center and Research Institute Tampa Florida

Department of Epidemiology School of Public Health Nanjing Medical University Nanjing China

Department of Health Sciences Research Mayo Clinic Rochester Minnesota

Department of Medical Oncology Cantonal Hospital St Gallen St Gallen Switzerland

Department of Oncology and Metabolism University of Sheffield Medical School Sheffield United Kingdom

Department of Preventive Medicine and Public Health University of Santiago de Compostela Galicia Spain

Department of Thoracic Surgery Clinical Center of Serbia Belgrade Serbia

Department of Thoracic Surgery Fudan University Shanghai Cancer Center Shanghai China

Division of Cancer Epidemiology and Genetics National Cancer Institute National Institutes of Health Bethesda Maryland

Division of Clinical Epidemiology and Aging Research German Cancer Research Center Heidelberg Germany

Division of Genome Biology National Cancer Centre Research Institute Tokyo Japan

Division of Medical Oncology Hospital de Base de São José do Rio Preto SP Brazil

Division of Preventive Oncology German Cancer Research Center Heidelberg Germany

German Cancer Consortium Heidelberg Germany

Harvard T H Chan School of Public Health Boston Massachusetts

ICVS 3B's PT Government Associate Laboratory Braga Portugal

Institute of Hygiene and Epidemiology 1st Faculty of Medicine Charles University Prague Czech Republic

International Agency for Research on Cancer Lyon France

IUOPA University of Oviedo and ISPA and CIBERESP Asturias Spain

Kaiser Permanente Northern California Division of Research Oakland California

Laboratory of Human Carcinogenesis Centre for Cancer Research National Institutes of Health Bethesda Maryland

Life and Health Sciences Research Institute Medical School University of Minho Braga Portugal

Lunenfeld Tanenbaum Research Institute Sinai Health Systems Toronto Ontario Canada

Molecular Oncology Research Center Barretos Cancer Hospital Barretos Brazil

National Institute of Public Health Bucharest Romania

Network of Aging Research Heidelberg University Heidelberg Germany

Program in Biostatistics Division of Public Health Sciences Fred Hutchinson Cancer Research Center Seattle Washington

Program in Epidemiology Division of Public Health Sciences Fred Hutchinson Cancer Research Center Seattle Washington

Roy Castle Lung Cancer Research Programme The University of Liverpool Department of Molecular and Clinical Cancer Medicine Liverpool United Kingdom

Russian N N Blokhin Cancer Research Centre Moscow Russian Federation

Sheffield Teaching Hospitals Foundation Trust Sheffield United Kingdom

State Key Laboratory of Respiratory Disease National Clinical Research Center for Respiratory Disease Guangzhou Institute of Respiratory Health The 1st Affiliated Hospital of Guangzhou Medical University Guangzhou China

Swedish Cancer Institute Seattle Washington

The Nofer Institute of Occupational Medicine Lodz Poland

The Princess Margaret Cancer Centre and University Health Network University of Toronto Toronto Ontario Canada

The University of California Davis Medical Sciences Davis California

The University of Texas MD Anderson Cancer Center Houston Texas

University of Hawaii Cancer Center Honolulu Hawaii

University of Ottawa Ottawa Ontario Canada

Citace poskytuje Crossref.org

000      
00000naa a2200000 a 4500
001      
bmc22019251
003      
CZ-PrNML
005      
20220804135453.0
007      
ta
008      
220720s2022 xxu f 000 0|eng||
009      
AR
024    7_
$a 10.1158/1055-9965.EPI-21-0747 $2 doi
035    __
$a (PubMed)35027437
040    __
$a ABA008 $b cze $d ABA008 $e AACR2
041    0_
$a eng
044    __
$a xxu
100    1_
$a Schmid, Sabine $u The Princess Margaret Cancer Centre and University Health Network, University of Toronto, Toronto, Ontario, Canada $u Department of Medical Oncology, Cantonal Hospital St. Gallen, St. Gallen, Switzerland
245    10
$a Accounting for EGFR Mutations in Epidemiologic Analyses of Non-Small Cell Lung Cancers: Examples Based on the International Lung Cancer Consortium Data / $c S. Schmid, M. Jiang, MC. Brown, A. Fares, M. Garcia, J. Soriano, M. Dong, S. Thomas, T. Kohno, LF. Leal, N. Diao, J. Xie, Z. Wang, D. Zaridze, I. Holcatova, J. Lissowska, B. Świątkowska, D. Mates, M. Savic, AS. Wenzlaff, CC. Harris, NE. Caporaso, H. Ma, G. Fernandez-Tardon, MJ. Barnett, G. Goodman, MPA. Davies, M. Pérez-Ríos, F. Taylor, EJ. Duell, B. Schoettker, H. Brenner, A. Andrew, A. Cox, A. Ruano-Ravina, JK. Field, LL. Marchand, Y. Wang, C. Chen, A. Tardon, S. Shete, MB. Schabath, H. Shen, MT. Landi, BM. Ryan, AG. Schwartz, L. Qi, LC. Sakoda, P. Brennan, P. Yang, J. Zhang, DC. Christiani, RM. Reis, K. Shiraishi, RJ. Hung, W. Xu, G. Liu
520    9_
$a BACKGROUND: Somatic EGFR mutations define a subset of non-small cell lung cancers (NSCLC) that have clinical impact on NSCLC risk and outcome. However, EGFR-mutation-status is often missing in epidemiologic datasets. We developed and tested pragmatic approaches to account for EGFR-mutation-status based on variables commonly included in epidemiologic datasets and evaluated the clinical utility of these approaches. METHODS: Through analysis of the International Lung Cancer Consortium (ILCCO) epidemiologic datasets, we developed a regression model for EGFR-status; we then applied a clinical-restriction approach using the optimal cut-point, and a second epidemiologic, multiple imputation approach to ILCCO survival analyses that did and did not account for EGFR-status. RESULTS: Of 35,356 ILCCO patients with NSCLC, EGFR-mutation-status was available in 4,231 patients. A model regressing known EGFR-mutation-status on clinical and demographic variables achieved a concordance index of 0.75 (95% CI, 0.74-0.77) in the training and 0.77 (95% CI, 0.74-0.79) in the testing dataset. At an optimal cut-point of probability-score = 0.335, sensitivity = 69% and specificity = 72.5% for determining EGFR-wildtype status. In both restriction-based and imputation-based regression analyses of the individual roles of BMI on overall survival of patients with NSCLC, similar results were observed between overall and EGFR-mutation-negative cohort analyses of patients of all ancestries. However, our approach identified some differences: EGFR-mutated Asian patients did not incur a survival benefit from being obese, as observed in EGFR-wildtype Asian patients. CONCLUSIONS: We introduce a pragmatic method to evaluate the potential impact of EGFR-status on epidemiological analyses of NSCLC. IMPACT: The proposed method is generalizable in the common occurrence in which EGFR-status data are missing.
650    12
$a nemalobuněčný karcinom plic $x epidemiologie $x genetika $7 D002289
650    _2
$a erbB receptory $x genetika $7 D066246
650    _2
$a lidé $7 D006801
650    12
$a nádory plic $x epidemiologie $x genetika $7 D008175
650    _2
$a mutace $7 D009154
650    _2
$a analýza přežití $7 D016019
655    _2
$a časopisecké články $7 D016428
655    _2
$a Research Support, N.I.H., Extramural $7 D052061
655    _2
$a práce podpořená grantem $7 D013485
700    1_
$a Jiang, Mei $u State Key Laboratory of Respiratory Disease, National Clinical Research Center for Respiratory Disease, Guangzhou Institute of Respiratory Health, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou, China $1 https://orcid.org/0000000273932664
700    1_
$a Brown, M Catherine $u The Princess Margaret Cancer Centre and University Health Network, University of Toronto, Toronto, Ontario, Canada $1 https://orcid.org/0000000301847732
700    1_
$a Fares, Aline $u Division of Medical Oncology, Hospital de Base de São José do Rio Preto, SP, Brazil
700    1_
$a Garcia, Miguel $u The Princess Margaret Cancer Centre and University Health Network, University of Toronto, Toronto, Ontario, Canada
700    1_
$a Soriano, Joelle $u The Princess Margaret Cancer Centre and University Health Network, University of Toronto, Toronto, Ontario, Canada $u University of Ottawa, Ottawa, Ontario, Canada
700    1_
$a Dong, Mei $u The Princess Margaret Cancer Centre and University Health Network, University of Toronto, Toronto, Ontario, Canada $u Dalla Lana School of Public Health, University of Toronto, Toronto, Ontario, Canada $1 https://orcid.org/0000000317355361
700    1_
$a Thomas, Sera $u Lunenfeld-Tanenbaum Research Institute, Sinai Health Systems, Toronto, Ontario, Canada
700    1_
$a Kohno, Takashi $u Division of Genome Biology, National Cancer Centre Research Institute, Tokyo, Japan $1 https://orcid.org/000000025371706X
700    1_
$a Leal, Leticia Ferro $u Molecular Oncology Research Center, Barretos Cancer Hospital, Barretos, Brazil
700    1_
$a Diao, Nancy $u Harvard T.H. Chan School of Public Health, Boston, Massachusetts $1 https://orcid.org/0000000317410244
700    1_
$a Xie, Juntao $u Department of Thoracic Surgery, Fudan University Shanghai Cancer Center, Shanghai, China
700    1_
$a Wang, Zhichao $u Department of Health Sciences Research, Mayo Clinic, Rochester, Minnesota $u Affiliated Hospital of Nanjing University of Chinese Medicine, Nanjing, China $1 https://orcid.org/0000000201361911
700    1_
$a Zaridze, David $u Russian N.N. Blokhin Cancer Research Centre, Moscow, Russian Federation
700    1_
$a Holcatova, Ivana $u Institute of Hygiene and Epidemiology, 1st Faculty of Medicine, Charles University, Prague, Czech Republic
700    1_
$a Lissowska, Jolanta $u Department of Cancer Epidemiology and Prevention, M. Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland
700    1_
$a Świątkowska, Beata $u The Nofer Institute of Occupational Medicine, Lodz, Poland $1 https://orcid.org/0000000337573868
700    1_
$a Mates, Dana $u National Institute of Public Health, Bucharest, Romania $1 https://orcid.org/0000000262199807
700    1_
$a Savic, Milan $u Department of Thoracic Surgery, Clinical Center of Serbia, Belgrade, Serbia
700    1_
$a Wenzlaff, Angela S $u Barbara Ann Karmanos Cancer Institute, Wayne State University, Detroit, Michigan $1 https://orcid.org/0000000186698240
700    1_
$a Harris, Curtis C $u Laboratory of Human Carcinogenesis, Centre for Cancer Research, National Institutes of Health, Bethesda, Maryland
700    1_
$a Caporaso, Neil E $u Division of Cancer Epidemiology and Genetics, National Cancer Institute, National Institutes of Health, Bethesda, Maryland
700    1_
$a Ma, Hongxia $u Department of Epidemiology, School of Public Health, Nanjing Medical University, Nanjing, China
700    1_
$a Fernandez-Tardon, Guillermo $u IUOPA, University of Oviedo, and ISPA (Health Research Institute of the Principality of Asturias) and CIBERESP, Asturias, Spain $1 https://orcid.org/000000027680158X
700    1_
$a Barnett, Matthew J $u Program in Biostatistics Division of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington $1 https://orcid.org/0000000210281091
700    1_
$a Goodman, Gary $u Swedish Cancer Institute, Seattle, Washington
700    1_
$a Davies, Michael P A $u Roy Castle Lung Cancer Research Programme, The University of Liverpool, Department of Molecular and Clinical Cancer Medicine, Liverpool, United Kingdom $1 https://orcid.org/0000000276094977
700    1_
$a Pérez-Ríos, Mónica $u Department of Preventive Medicine and Public Health, University of Santiago de Compostela, Galicia, Spain $u CIBER de Epidemiología y Salud Pública, CIBERESP, Santiago de Compostela, Galicia, Spain
700    1_
$a Taylor, Fiona $u Department of Oncology and Metabolism, University of Sheffield Medical School, Sheffield, United Kingdom $u Sheffield Teaching Hospitals Foundation Trust, Sheffield, United Kingdom
700    1_
$a Duell, Eric J $u Catalan Institute of Oncology (ICO), Barcelona, Spain $u Bellvitge Biomedical Research Institute (IDIBELL), L'Hospitalet de Llobregat, Barcelona, Spain $1 https://orcid.org/0000000152560163
700    1_
$a Schoettker, Ben $u Division of Clinical Epidemiology and Aging Research, German Cancer Research Center (DKFZ), Heidelberg, Germany $u Network of Aging Research, Heidelberg University, Heidelberg, Germany
700    1_
$a Brenner, Hermann $u Division of Clinical Epidemiology and Aging Research, German Cancer Research Center (DKFZ), Heidelberg, Germany $u Network of Aging Research, Heidelberg University, Heidelberg, Germany $u Division of Preventive Oncology, German Cancer Research Center (DKFZ) and National Center for Tumor Diseases (NCT), Heidelberg, Germany $u German Cancer Consortium (DKTK), German Cancer Research Center (DKFZ), Heidelberg, Germany $1 https://orcid.org/0000000261291572
700    1_
$a Andrew, Angeline $u Dartmouth-Hitchcock Medical Center, Lebanon, New Hampshire
700    1_
$a Cox, Angela $u Department of Oncology and Metabolism, University of Sheffield Medical School, Sheffield, United Kingdom $1 https://orcid.org/0000000251381099
700    1_
$a Ruano-Ravina, Alberto $u Department of Preventive Medicine and Public Health, University of Santiago de Compostela, Galicia, Spain $u CIBER de Epidemiología y Salud Pública, CIBERESP, Santiago de Compostela, Galicia, Spain $1 https://orcid.org/0000000199277453
700    1_
$a Field, John K $u Roy Castle Lung Cancer Research Programme, The University of Liverpool, Department of Molecular and Clinical Cancer Medicine, Liverpool, United Kingdom $1 https://orcid.org/0000000339516365
700    1_
$a Marchand, Loic Le $u University of Hawaii Cancer Center, Honolulu, Hawaii
700    1_
$a Wang, Ying $u American Cancer Society, Atlanta, Georgia
700    1_
$a Chen, Chu $u Program in Epidemiology, Division of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington
700    1_
$a Tardon, Adonina $u IUOPA, University of Oviedo, and ISPA (Health Research Institute of the Principality of Asturias) and CIBERESP, Asturias, Spain $1 https://orcid.org/0000000151501209
700    1_
$a Shete, Sanjay $u The University of Texas MD Anderson Cancer Center, Houston, Texas
700    1_
$a Schabath, Matthew B $u Department of Cancer Epidemiology, H. Lee Moffitt Cancer Center & Research Institute, Tampa, Florida $1 https://orcid.org/0000000332413216
700    1_
$a Shen, Hongbing $u Department of Epidemiology, School of Public Health, Nanjing Medical University, Nanjing, China
700    1_
$a Landi, Maria Teresa $u Division of Cancer Epidemiology and Genetics, National Cancer Institute, National Institutes of Health, Bethesda, Maryland
700    1_
$a Ryan, Brid M $u Laboratory of Human Carcinogenesis, Centre for Cancer Research, National Institutes of Health, Bethesda, Maryland
700    1_
$a Schwartz, Ann G $u Barbara Ann Karmanos Cancer Institute, Wayne State University, Detroit, Michigan $1 https://orcid.org/0000000295251157
700    1_
$a Qi, Lihong $u The University of California Davis Medical Sciences, Davis, California
700    1_
$a Sakoda, Lori C $u Kaiser Permanente Northern California, Division of Research, Oakland, California $1 https://orcid.org/0000000209005735
700    1_
$a Brennan, Paul $u International Agency for Research on Cancer, Lyon, France $1 https://orcid.org/0000000205188714
700    1_
$a Yang, Ping $u Department of Health Sciences Research, Mayo Clinic, Rochester, Minnesota $1 https://orcid.org/000000028588847X
700    1_
$a Zhang, Jie $u Department of Thoracic Surgery, Fudan University Shanghai Cancer Center, Shanghai, China
700    1_
$a Christiani, David C $u Harvard T.H. Chan School of Public Health, Boston, Massachusetts $1 https://orcid.org/0000000203010242
700    1_
$a Reis, Rui Manuel $u Molecular Oncology Research Center, Barretos Cancer Hospital, Barretos, Brazil $u Life and Health Sciences Research Institute (ICVS), Medical School, University of Minho, Braga, Portugal $u ICVS/3B's-PT Government Associate Laboratory, Braga, Portugal $1 https://orcid.org/0000000296397940
700    1_
$a Shiraishi, Kouya $u Division of Genome Biology, National Cancer Centre Research Institute, Tokyo, Japan
700    1_
$a Hung, Rayjean J $u Dalla Lana School of Public Health, University of Toronto, Toronto, Ontario, Canada $u Lunenfeld-Tanenbaum Research Institute, Sinai Health Systems, Toronto, Ontario, Canada $1 https://orcid.org/0000000244867496
700    1_
$a Xu, Wei $u The Princess Margaret Cancer Centre and University Health Network, University of Toronto, Toronto, Ontario, Canada $u Dalla Lana School of Public Health, University of Toronto, Toronto, Ontario, Canada
700    1_
$a Liu, Geoffrey $u The Princess Margaret Cancer Centre and University Health Network, University of Toronto, Toronto, Ontario, Canada $u Dalla Lana School of Public Health, University of Toronto, Toronto, Ontario, Canada $1 https://orcid.org/0000000226037296
773    0_
$w MED00006442 $t Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology $x 1538-7755 $g Roč. 31, č. 3 (2022), s. 679-687
856    41
$u https://pubmed.ncbi.nlm.nih.gov/35027437 $y Pubmed
910    __
$a ABA008 $b sig $c sign $y p $z 0
990    __
$a 20220720 $b ABA008
991    __
$a 20220804135446 $b ABA008
999    __
$a ok $b bmc $g 1822725 $s 1170494
BAS    __
$a 3
BAS    __
$a PreBMC
BMC    __
$a 2022 $b 31 $c 3 $d 679-687 $e 2022Mar01 $i 1538-7755 $m Cancer epidemiology, biomarkers & prevention $n Cancer Epidemiol Biomarkers Prev $x MED00006442
GRA    __
$a U01 CA063673 $p NCI NIH HHS $2 United States
GRA    __
$a U01 CA167462 $p NCI NIH HHS $2 United States
GRA    __
$a P30 CA076292 $p NCI NIH HHS $2 United States
GRA    __
$a U01-CA063673 $p NIH HHS $2 United States
GRA    __
$a U01 CA209414 $p NCI NIH HHS $2 United States
GRA    __
$a UM1 CA167462 $p NCI NIH HHS $2 United States
LZP    __
$a Pubmed-20220720

Najít záznam

Citační ukazatele

Pouze přihlášení uživatelé

Možnosti archivace

Nahrávání dat ...