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A finding of potential coexisting bacteria and characterization of the bacterial communities in the fruiting body of Sarcodon aspratus
FC. Chen, FC. Chen, T. Motoda
Status minimální Jazyk angličtina Země Česko
Typ dokumentu časopisecké články
- MeSH
- Bacteria * klasifikace genetika izolace a purifikace MeSH
- biodiverzita MeSH
- DNA bakterií genetika MeSH
- fylogeneze * MeSH
- mikrobiota MeSH
- plodnice hub * růst a vývoj MeSH
- půdní mikrobiologie MeSH
- RNA ribozomální 16S * genetika MeSH
- sekvenční analýza DNA MeSH
- Publikační typ
- časopisecké články MeSH
Sarcodon aspratus (Berk.) S. Ito is a Japanese local dish with unique aroma and is effective against allergic diseases. However, its cultivation was still difficult. Recently, coexisting bacteria were regarded as an important factor for mycelium growth and fruiting body formation. Therefore, we performed 16S rRNA amplicon sequencing in the fruiting body of S. aspratus and its adhered soil to understand the bacterial communities in the fruiting body of S. aspratus. The fruiting body group showed lower alpha diversities and a significant difference in the structure of bacterial communities compared to the soil group. In addition, Allorhizobium-Neorhizobium-Pararhizobium-Rhizobium had the highest relative abundance in the fruiting body group, and it was also a potential coexisting bacterium in the fruiting body of S. aspratus by linear discriminant analysis effect size (LEfSe) analysis. This highest relative abundance phenomenon in Allorhizobium-Neorhizobium-Pararhizobium-Rhizobium clade was also found in the fruiting body of Cantharellus cibarius. These findings suggested that Allorhizobium-Neorhizobium-Pararhizobium-Rhizobium plays a key role in the bacterial communities in the fruiting body of S. aspratus. Bacteria in the fruit bodies of S. aspratus and C. cibarius probably present a similar coexistence model.
Institute of Wood Technology Akita Prefectural University Akita Japan
Jin Sing Chen's Mushroom Farm No 31 Donghu Road Dali District Taichung City Taiwan ROC
Citace poskytuje Crossref.org
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