Transcription of the chicken myb proto-oncogene starts within a CpG island
Language English Country Great Britain, England Media print
Document type Comparative Study, Journal Article
PubMed
2548166
PubMed Central
PMC318186
DOI
10.1093/nar/17.14.5651
Knihovny.cz E-resources
- MeSH
- Dinucleoside Phosphates analysis MeSH
- Single-Strand Specific DNA and RNA Endonucleases MeSH
- Endonucleases MeSH
- Erythrocytes analysis MeSH
- Transcription, Genetic * MeSH
- Cloning, Molecular MeSH
- Chickens MeSH
- Molecular Sequence Data MeSH
- Mice MeSH
- Organ Specificity MeSH
- Promoter Regions, Genetic MeSH
- Proto-Oncogene Proteins c-myb MeSH
- Proto-Oncogene Proteins genetics MeSH
- Proto-Oncogenes * MeSH
- Restriction Mapping MeSH
- RNA Caps genetics MeSH
- Base Sequence MeSH
- Sequence Homology, Nucleic Acid MeSH
- Thymus Gland analysis MeSH
- Animals MeSH
- Check Tag
- Male MeSH
- Mice MeSH
- Animals MeSH
- Publication type
- Journal Article MeSH
- Comparative Study MeSH
- Names of Substances
- cytidylyl-3'-5'-guanosine MeSH Browser
- Dinucleoside Phosphates MeSH
- Single-Strand Specific DNA and RNA Endonucleases MeSH
- Endonucleases MeSH
- Proto-Oncogene Proteins c-myb MeSH
- Proto-Oncogene Proteins MeSH
- RNA Caps MeSH
The nucleotide sequence of an 8.2-kb DNA fragment from the 5' proximal part of the chicken myb proto-oncogene spanning 1761 nucleotides upstream and 6436 nucleotides downstream from a presumed c-myb initiation codon was determined. A 3.3-kb G + C-rich region found in this sequence had also other features characterizing CpG islands, i.e. no CpG underrepresentation and lack of CpG methylation. In haematopoietic tissues c-myb mRNA synthesis starts in two major regions of the CpG island, namely 98 to 108 and 143 to 145 nucleotides upstream from the c-myb initiation codon. These two regions are in or close to the 124-bp evolutionarily conserved element located in the middle part of the CpG island. No alternative splicing of the 5' end of c-myb mRNA suggested earlier (1,2) was observed. The c-myb promoter contains neither TATA nor CAAT box-like structures at the usual positions. Instead, numerous potential Sp1 factor binding sites were found both upstream and downstream from the transcription initiation sites. Moreover, consensus v-myb protein DNA-binding sites were revealed in the promoter region and in sequences downstream from it.
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