Nucleotide composition bias and CpG dinucleotide content in the genomes of HIV and HTLV 1/2
Jazyk angličtina Země Nizozemsko Médium print
Typ dokumentu časopisecké články
PubMed
2597678
DOI
10.1016/0167-4781(89)90114-0
PII: 0167-4781(89)90114-0
Knihovny.cz E-zdroje
- MeSH
- adenin analýza MeSH
- cytidin analýza MeSH
- cytosin analýza MeSH
- HIV genetika MeSH
- lidský T-lymfotropní virus 1 genetika MeSH
- lidský T-lymfotropní virus 2 genetika MeSH
- nukleotidy analýza MeSH
- zastoupení bazí MeSH
- Publikační typ
- časopisecké články MeSH
- Názvy látek
- adenin MeSH
- cytidin MeSH
- cytosin MeSH
- nukleotidy MeSH
Nucleotide compositions of the HIV subfamily and HTLV 1/2 genomes are strongly biased in a remarkably opposite way; HIV is adenine-rich and cytosine-poor while HTLV 1/2 is cytosine-rich and adenine-poor. In addition, the CpG dinucleotides are underrepresented in HIV but abundant in HTLV 1/2. By these two properties the genomes of HIV and HTLV 1/2 mimic an (A + T)-rich and (G + C)-rich segment of the host genome, respectively. These dramatic differences between the two human retroviruses might have evolved to direct integration of the retroviral genomes into specific segments of the human chromosomes.
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