Nucleotide composition bias and CpG dinucleotide content in the genomes of HIV and HTLV 1/2
Language English Country Netherlands Media print
Document type Journal Article
PubMed
2597678
DOI
10.1016/0167-4781(89)90114-0
PII: 0167-4781(89)90114-0
Knihovny.cz E-resources
- MeSH
- Adenine analysis MeSH
- Cytidine analysis MeSH
- Cytosine analysis MeSH
- HIV genetics MeSH
- Human T-lymphotropic virus 1 genetics MeSH
- Human T-lymphotropic virus 2 genetics MeSH
- Nucleotides analysis MeSH
- Base Composition MeSH
- Publication type
- Journal Article MeSH
- Names of Substances
- Adenine MeSH
- Cytidine MeSH
- Cytosine MeSH
- Nucleotides MeSH
Nucleotide compositions of the HIV subfamily and HTLV 1/2 genomes are strongly biased in a remarkably opposite way; HIV is adenine-rich and cytosine-poor while HTLV 1/2 is cytosine-rich and adenine-poor. In addition, the CpG dinucleotides are underrepresented in HIV but abundant in HTLV 1/2. By these two properties the genomes of HIV and HTLV 1/2 mimic an (A + T)-rich and (G + C)-rich segment of the host genome, respectively. These dramatic differences between the two human retroviruses might have evolved to direct integration of the retroviral genomes into specific segments of the human chromosomes.
References provided by Crossref.org
Remnants of an Ancient Deltaretrovirus in the Genomes of Horseshoe Bats (Rhinolophidae)
Mosaic structure of the DNA molecules of the human chromosomes 21 and 22
Conformational properties of DNA strands containing guanine-adenine and thymine-adenine repeats
Biased distribution of adenine and thymine in gene nucleotide sequences