SKIP is an indispensable factor for Caenorhabditis elegans development
Jazyk angličtina Země Spojené státy americké Médium print-electronic
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
12084813
PubMed Central
PMC123127
DOI
10.1073/pnas.112213799
PII: 112213799
Knihovny.cz E-zdroje
- MeSH
- Caenorhabditis elegans genetika růst a vývoj MeSH
- fungální RNA antagonisté a inhibitory genetika MeSH
- geneticky modifikovaná zvířata MeSH
- geny helmintů MeSH
- jaderné proteiny genetika fyziologie MeSH
- komplexy ubikvitinligas MeSH
- larva růst a vývoj MeSH
- proteiny Caenorhabditis elegans genetika fyziologie MeSH
- proteiny červů genetika fyziologie MeSH
- RNA-polymerasa II antagonisté a inhibitory MeSH
- transkripční faktory genetika fyziologie MeSH
- vývojová regulace genové exprese MeSH
- zvířata MeSH
- Check Tag
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Názvy látek
- bir-1 protein, C elegans MeSH Prohlížeč
- fungální RNA MeSH
- jaderné proteiny MeSH
- komplexy ubikvitinligas MeSH
- proteiny Caenorhabditis elegans MeSH
- proteiny červů MeSH
- RNA-polymerasa II MeSH
- skp-1 protein, C elegans MeSH Prohlížeč
- transkripční faktory MeSH
SKI-binding protein (SKIP) is a transcription cofactor present in all eukaryotes. Here we show that SKIP is a unique protein that is required for Caenorhabditis elegans viability and development. Expression of CeSKIP (skp-1) assayed by RT-PCR and by GFP fluorescence in transgenic lines starts in embryos and continues to adulthood. Loss of CeSKIP activity by RNA-mediated inhibition results in early embryonic arrest similar to that seen following inhibition of RNA polymerase II. RNA polymerase II phosphorylation appears normal early in CeSKIP RNA-mediated inhibition treated embryos although the expression of several embryonic GFP reporter genes is severely restricted or absent. Our data suggest that CeSKIP is an essential component of many RNA polymerase II transcription complexes and is indispensable for C. elegans development.
Zobrazit více v PubMed
Ito M, Roeder R G. Trends Endocrinol Metab. 2001;12:127–134. PubMed
Saumweber H, Frasch M, Korge G. Chromosoma. 1990;99:52–60. PubMed
Harris S D, Cheng J, Pugh T A, Pringle J R. J Mol Biol. 1992;225:53–65. PubMed
Folk P, Puta F, Krpejsova L, Blahuskova A, Markos A, Rabino M, Dottin R P. Gene. 1996;181:229–231. PubMed
Baudino T A, Kraichely D M, Jefcoat S C, Jr, Winchester S K, Partridge N C, MacDonald P N. J Biol Chem. 1998;273:16434–16441. PubMed
Dahl R, Wani B, Hayman M J. Oncogene. 1998;16:1579–1586. PubMed
Zhou S, Fujimuro M, Hsieh J J, Chen L, Miyamoto A, Weinmaster G, Hayward S D. Mol Cell Biol. 2000;20:2400–2410. PubMed PMC
Zhou S, Fujimuro M, Hsieh J J, Chen L, Hayward S D. J Virol. 2000;74:1939–1947. PubMed PMC
Zhang J, Chen H, Weinmaster G, Hayward S D. J Virol. 2001;75:2946–2956. PubMed PMC
Leong G M, Subramaniam N, Figueroa J, Flanagan J L, Hayman M J, Eisman J A, Kouzmenko A P. J Biol Chem. 2001;276:18243–18248. PubMed
Brenner S. Genetics. 1974;77:71–94. PubMed PMC
Fukushige T, Hawkins M G, McGhee J D. Dev Biol. 1998;198:286–302. PubMed
Fukushige T, Hendzel M J, Bazett-Jones D P, McGhee J D. Proc Natl Acad Sci USA. 1999;96:11883–11888. PubMed PMC
Krause M, Harrison S W, Xu S Q, Chen L, Fire A. Dev Biol. 1994;166:133–148. PubMed
Krause M, Park M, Zhang J M, Yuan J, Harfe B, Xu S Q, Greenwald I, Cole M, Paterson B, Fire A. Development (Cambridge, UK) 1997;124:2179–2189. PubMed
DeVore D L, Horvitz H R, Stern M J. Cell. 1995;83:611–620. PubMed
Harfe B D, Fire A. Development (Cambridge, UK) 1998;125:421–429. PubMed
Timmons L, Fire A. Nature (London) 1998;395:854. PubMed
Johnstone I L, Barry J D. EMBO J. 1996;15:3633–3639. PubMed PMC
Krause M. In: Caenorhabditis elegans: Modern Biological Analysis of an Organism. Epstein H F, Shakes D C, editors. Vol. 48. San Diego: Academic; 1995. pp. 483–512.
Wootton J C, Federhen S. Methods Enzymol. 1996;266:554–571. PubMed
Eddy S R. Bioinformatics. 1998;14:755–763. PubMed
Schultz J, Copley R R, Doerks T, Ponting C P, Bork P. Nucleic Acids Res. 2000;28:231–234. PubMed PMC
Bateman A, Birney E, Durbin R, Eddy S R, Howe K L, Sonnhammer E L. Nucleic Acids Res. 2000;28:263–266. PubMed PMC
Emanuelsson O, Nielsen H, Brunak S, von Heijne G. J Mol Biol. 2000;300:1005–1016. PubMed
Reinhardt A, Hubbard T. Nucleic Acids Res. 1998;26:2230–2236. PubMed PMC
Lander E S, Linton L M, Birren B, Nusbaum C, Zody M C, Baldwin J, Devon K, Dewar K, Doyle M, FitzHugh W, et al. Nature (London) 2001;409:860–921. PubMed
Blumenthal T, Spieth J. Curr Opin Genet Dev. 1996;6:692–698. PubMed
Fraser A G, James C, Evan G I, Hengartner M O. Curr Biol. 1999;9:292–301. PubMed
Speliotes E K, Uren A, Vaux D, Horvitz H R. Mol Cell. 2000;6:211–223. PubMed
Powell-Coffman J A, Knight J, Wood W B. Dev Biol. 1996;178:472–483. PubMed
Zhu J, Fukushige T, McGhee J D, Rothman J H. Genes Dev. 1998;12:3809–3814. PubMed PMC
Warren S L, Landolfi A S, Curtis C, Morrow J S. J Cell Sci. 1992;103:381–388. PubMed
Bregman D B, Du L, van der Zee S, Warren S L. J Cell Biol. 1995;129:287–298. PubMed PMC
Seydoux G, Dunn M A. Development (Cambridge, UK) 1997;124:2191–2201. PubMed
Kostrouchova M, Krause M, Kostrouch Z, Rall J E. Development (Cambridge, UK) 1998;125:1617–1626. PubMed
Kostrouchova M, Krause M, Kostrouch Z, Rall J E. Proc Natl Acad Sci USA. 2001;98:7360–7365. PubMed PMC
Prathapam T, Kuhne C, Hayman M, Banks L. Nucleic Acids Res. 2001;29:3469–3476. PubMed PMC
Heinzel T, Lavinsky R M, Mullen T M, Soderstrom M, Laherty C D, Torchia J, Yang W M, Brard G, Ngo S D, Davie J R, et al. Nature (London) 1997;387:43–48. PubMed
Nomura T, Khan M M, Kaul S C, Dong H D, Wadhwa R, Colmenares C, Kohno I, Ishii S. Genes Dev. 1999;13:412–423. PubMed PMC
Horlein A J, Naar A M, Heinzel T, Torchia J, Gloss B, Kurokawa R, Ryan A, Kamei Y, Soderstrom M, Glass C K, et al. Nature (London) 1995;377:397–404. PubMed
Hammond K L, Hanson I M, Brown A G, Lettice L A, Hill R E. Mech Dev. 1998;74:121–131. PubMed
BIR-1, a Caenorhabditis elegans homologue of Survivin, regulates transcription and development