Improved fluorescent labeling of chitin oligomers: Chitinolytic properties of acidic mammalian chitinase under somatic tissue pH conditions
Jazyk angličtina Země Velká Británie, Anglie Médium print-electronic
Typ dokumentu časopisecké články
PubMed
28325311
DOI
10.1016/j.carbpol.2017.01.095
PII: S0144-8617(17)30109-1
Knihovny.cz E-zdroje
- Klíčová slova
- Acidic mammalian chitinase, Chitin, Chitin degradation products, Chitin oligomers, Fluorophore, Pre-acidification method,
- MeSH
- chitin chemie MeSH
- chitinasy chemie MeSH
- fluorescence * MeSH
- glukosamin chemie MeSH
- koncentrace vodíkových iontů MeSH
- myši MeSH
- zvířata MeSH
- Check Tag
- myši MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- Názvy látek
- chitin MeSH
- chitinasy MeSH
- glukosamin MeSH
Acidic mammalian chitinase (AMCase) has been implicated in various pathophysiological conditions including asthma, allergic inflammation and food processing. AMCase is most active at pH 2.0, and its activity gradually decreases to up to pH 8. Here we analyzed chitin degradation by AMCase in weak acidic to neutral conditions by fluorophore-assisted carbohydrate electrophoresis established originally for oligosaccharides analysis. We found that specific fragments with slower-than-expected mobility as defined by chitin oligosaccharide markers were generated at pH 5.0∼8.0 as by-products of the reaction. We established an improved method for chitin oligosaccharides suppressing this side reaction by pre-acidification of the fluorophore-labeling reaction mixture. Our improved method specifically detects chitin oligosaccharides and warrants quantification of up to 50nmol of the material. Using this strategy, we found that AMCase produced dimer of N-acetyl-d-glucosamine (GlcNAc) at strong acidic to neutral condition. Moreover, we found that AMCase generates (GlcNAc)2 as well as (GlcNAc)3 under physiological conditions.
Department of Chemistry and Life Science Kogakuin University Hachioji Tokyo Japan
Department of Neuroscience Mayo Clinic Jacksonville FL USA; Bioinova Ltd Prague 142 20 Czechia
Citace poskytuje Crossref.org
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