Aberrant tRNA processing causes an autoinflammatory syndrome responsive to TNF inhibitors
Jazyk angličtina Země Spojené státy americké Médium print-electronic
Typ dokumentu časopisecké články, Research Support, N.I.H., Intramural
PubMed
29358286
PubMed Central
PMC5890629
DOI
10.1136/annrheumdis-2017-212401
PII: S0003-4967(24)00943-9
Knihovny.cz E-zdroje
- Klíčová slova
- TRNT1, TNF inhibitors, anti-TNF therapy, autoinflammation, congenital sideroblastic anemia with immunodeficiency, developmental delay (SIFD), fevers, tRNA,
- MeSH
- antiflogistika terapeutické užití MeSH
- cytokiny krev genetika MeSH
- dítě MeSH
- dospělí MeSH
- fenotyp MeSH
- genetické nemoci vázané na chromozom X krev genetika MeSH
- imunofenotypizace MeSH
- lidé MeSH
- mutace * MeSH
- nukleotidyltransferasy genetika MeSH
- předškolní dítě MeSH
- RNA transferová genetika MeSH
- rodokmen MeSH
- sekvenování exomu MeSH
- sideroblastická anemie krev genetika MeSH
- syndromy imunologické nedostatečnosti genetika MeSH
- TNF-alfa analýza antagonisté a inhibitory MeSH
- vývojové poruchy u dětí genetika MeSH
- Check Tag
- dítě MeSH
- dospělí MeSH
- lidé MeSH
- mužské pohlaví MeSH
- předškolní dítě MeSH
- ženské pohlaví MeSH
- Publikační typ
- časopisecké články MeSH
- Research Support, N.I.H., Intramural MeSH
- Názvy látek
- antiflogistika MeSH
- cytokiny MeSH
- nukleotidyltransferasy MeSH
- RNA transferová MeSH
- TNF protein, human MeSH Prohlížeč
- TNF-alfa MeSH
- TRNT1 protein, human MeSH Prohlížeč
OBJECTIVES: To characterise the clinical features, immune manifestations and molecular mechanisms in a recently described autoinflammatory disease caused by mutations in TRNT1, a tRNA processing enzyme, and to explore the use of cytokine inhibitors in suppressing the inflammatory phenotype. METHODS: We studied nine patients with biallelic mutations in TRNT1 and the syndrome of congenital sideroblastic anaemia with immunodeficiency, fevers and developmental delay (SIFD). Genetic studies included whole exome sequencing (WES) and candidate gene screening. Patients' primary cells were used for deep RNA and tRNA sequencing, cytokine profiling, immunophenotyping, immunoblotting and electron microscopy (EM). RESULTS: We identified eight mutations in these nine patients, three of which have not been previously associated with SIFD. Three patients died in early childhood. Inflammatory cytokines, mainly interleukin (IL)-6, interferon gamma (IFN-γ) and IFN-induced cytokines were elevated in the serum, whereas tumour necrosis factor (TNF) and IL-1β were present in tissue biopsies of patients with active inflammatory disease. Deep tRNA sequencing of patients' fibroblasts showed significant deficiency of mature cytosolic tRNAs. EM of bone marrow and skin biopsy samples revealed striking abnormalities across all cell types and a mix of necrotic and normal-appearing cells. By immunoprecipitation, we found evidence for dysregulation in protein clearance pathways. In 4/4 patients, treatment with a TNF inhibitor suppressed inflammation, reduced the need for blood transfusions and improved growth. CONCLUSIONS: Mutations of TRNT1 lead to a severe and often fatal syndrome, linking protein homeostasis and autoinflammation. Molecular diagnosis in early life will be crucial for initiating anti-TNF therapy, which might prevent some of the severe disease consequences.
Department of Immunology Charles University and University Hospital Motol Prague Czech Republic
Department of Immunology University Children's Hospital Zurich Zurich Switzerland
Department of Pathology The Cleveland Clinic Cleveland Ohio USA
Department of Pediatric Hematology and Oncology University Hospital Motol Prague Czech Republic
Department of Pediatric Rheumatology Children's Hospital Lucerne Switzerland
Departments of Pediatrics and Immunology Duke University Medical Center Durham North Carolina USA
Division of Allergy and Immunology Cincinnati Children's Hospital Medical Center Cincinnati Ohio USA
Division of Rheumatology Cincinnati Children's Hospital Medical Center Cincinnati Ohio USA
Dr Sulaiman Al Habib Al Rayan Hospital Riyadh Saudi Arabia
Experimental Pathology Laboratory National Cancer Institute Bethesda Maryland USA
Inflammatory Disease Section National Human Genome Research Institute Bethesda Maryland USA
King Faisal Specialist Hospital and Research Center Riyadh Saudi Arabia
Laboratory of Pathology National Cancer Institute Bethesda Maryland USA
Section of Histopathology National Eye Institute Bethesda Maryland USA
Zebrafish Core National Human Genome Research Institute Bethesda Maryland USA
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Boisson B, Laplantine E, Prando C, et al. . Immunodeficiency, autoinflammation and amylopectinosis in humans with inherited HOIL-1 and LUBAC deficiency. Nat Immunol 2012;13:1178–86. 10.1038/ni.2457 PubMed DOI PMC
Ombrello MJ, Remmers EF, Sun G, et al. . Cold urticaria, immunodeficiency, and autoimmunity related to PLCG2 deletions. N Engl J Med 2012;366:330–8. 10.1056/NEJMoa1102140 PubMed DOI PMC
Zhou Q, Lee GS, Brady J, et al. . A hypermorphic missense mutation in PLCG2, encoding phospholipase Cγ2, causes a dominantly inherited autoinflammatory disease with immunodeficiency. Am J Hum Genet 2012;91:713–20. 10.1016/j.ajhg.2012.08.006 PubMed DOI PMC
Manthiram K, Zhou Q, Aksentijevich I, et al. . The monogenic autoinflammatory diseases define new pathways in human innate immunity and inflammation. Nat Immunol 2017;18:832–42. 10.1038/ni.3777 PubMed DOI
Standing AS, Malinova D, Hong Y, et al. . Autoinflammatory periodic fever, immunodeficiency, and thrombocytopenia (PFIT) caused by mutation in actin-regulatory gene WDR1. J Exp Med 2017;214:59–71. 10.1084/jem.20161228 PubMed DOI PMC
Wiseman DH, May A, Jolles S, et al. . A novel syndrome of congenital sideroblastic anemia, B-cell immunodeficiency, periodic fevers, and developmental delay (SIFD). Blood 2013;122:112–23. 10.1182/blood-2012-08-439083 PubMed DOI PMC
Chakraborty PK, Schmitz-Abe K, Kennedy EK, et al. . Mutations in TRNT1 cause congenital sideroblastic anemia with immunodeficiency, fevers, and developmental delay (SIFD). Blood 2014;124:2867–71. 10.1182/blood-2014-08-591370 PubMed DOI PMC
Sasarman F, Thiffault I, Weraarpachai W, et al. . The 3' addition of CCA to mitochondrial tRNASer(AGY) is specifically impaired in patients with mutations in the tRNA nucleotidyl transferase TRNT1. Hum Mol Genet 2015;24:2841–7. 10.1093/hmg/ddv044 PubMed DOI PMC
DeLuca AP, Whitmore SS, Barnes J, et al. . Hypomorphic mutations in TRNT1 cause retinitis pigmentosa with erythrocytic microcytosis. Hum Mol Genet 2016;25:44–56. 10.1093/hmg/ddv446 PubMed DOI PMC
Hull S, Malik AN, Arno G, et al. . Expanding the Phenotype of TRNT1-Related Immunodeficiency to Include Childhood Cataract and Inner Retinal Dysfunction. JAMA Ophthalmol 2016;134:1049–53. 10.1001/jamaophthalmol.2015.5833 PubMed DOI
Liwak-Muir U, Mamady H, Naas T, et al. . Impaired activity of CCA-adding enzyme TRNT1 impacts OXPHOS complexes and cellular respiration in SIFD patient-derived fibroblasts. Orphanet J Rare Dis 2016;11:79 10.1186/s13023-016-0466-3 PubMed DOI PMC
Wedatilake Y, Niazi R, Fassone E, et al. . TRNT1 deficiency: clinical, biochemical and molecular genetic features. Orphanet J Rare Dis 2016;11:90 10.1186/s13023-016-0477-0 PubMed DOI PMC
Frans G, Moens L, Schaballie H, et al. . Homozygous N-terminal missense mutation in TRNT1 leads to progressive B-cell immunodeficiency in adulthood. J Allergy Clin Immunol 2017;139:360–3. 10.1016/j.jaci.2016.06.050 PubMed DOI
Sharma TP, Wiley LA, Whitmore SS, et al. . Patient-specific induced pluripotent stem cells to evaluate the pathophysiology of TRNT1-associated Retinitis pigmentosa. Stem Cell Res 2017;21:58–70. 10.1016/j.scr.2017.03.005 PubMed DOI
Augustin MA, Reichert AS, Betat H, et al. . Crystal structure of the human CCA-adding enzyme: insights into template-independent polymerization. J Mol Biol 2003;328:985–94. 10.1016/S0022-2836(03)00381-4 PubMed DOI
Wilusz JE, Whipple JM, Phizicky EM, et al. . tRNAs marked with CCACCA are targeted for degradation. Science 2011;334:817–21. 10.1126/science.1213671 PubMed DOI PMC
Dulau Florea AE, Braylan RC, Schafernak KT, et al. . Abnormal B-cell maturation in the bone marrow of patients with germline mutations in PIK3CD. J Allergy Clin Immunol 2017;139:1032–35. 10.1016/j.jaci.2016.08.028 PubMed DOI PMC
Ahlenstiel G, Titerence RH, Koh C, et al. . Natural killer cells are polarized toward cytotoxicity in chronic hepatitis C in an interferon-alfa-dependent manner. Gastroenterology 2010;138:335–25. 10.1053/j.gastro.2009.08.066 PubMed DOI PMC
Nakahira K, Haspel JA, Rathinam VA, et al. . Autophagy proteins regulate innate immune responses by inhibiting the release of mitochondrial DNA mediated by the NALP3 inflammasome. Nat Immunol 2011;12:222–30. 10.1038/ni.1980 PubMed DOI PMC
Zhou R, Yazdi AS, Menu P, et al. . A role for mitochondria in NLRP3 inflammasome activation. Nature 2011;469:221–5. 10.1038/nature09663 PubMed DOI
Korolchuk VI, Menzies FM, Rubinsztein DC. Mechanisms of cross-talk between the ubiquitin-proteasome and autophagy-lysosome systems. FEBS Lett 2010;584:1393–8. 10.1016/j.febslet.2009.12.047 PubMed DOI
Myeku N, Figueiredo-Pereira ME. Dynamics of the degradation of ubiquitinated proteins by proteasomes and autophagy: association with sequestosome 1/p62. J Biol Chem 2011;286:22426–40. 10.1074/jbc.M110.149252 PubMed DOI PMC
Martinon F, Aksentijevich I. New players driving inflammation in monogenic autoinflammatory diseases. Nat Rev Rheumatol 2015;11:11–20. 10.1038/nrrheum.2014.158 PubMed DOI
Vanden Berghe T, Kalai M, Denecker G, et al. . Necrosis is associated with IL-6 production but apoptosis is not. Cell Signal 2006;18:328–35. 10.1016/j.cellsig.2005.05.003 PubMed DOI
Kaczmarek A, Vandenabeele P, Krysko DV. Necroptosis: the release of damage-associated molecular patterns and its physiological relevance. Immunity 2013;38:209–23. 10.1016/j.immuni.2013.02.003 PubMed DOI
Pasparakis M, Vandenabeele P. Necroptosis and its role in inflammation. Nature 2015;517:311–20. 10.1038/nature14191 PubMed DOI
Duprez L, Takahashi N, Van Hauwermeiren F, et al. . RIP kinase-dependent necrosis drives lethal systemic inflammatory response syndrome. Immunity 2011;35:908–18. 10.1016/j.immuni.2011.09.020 PubMed DOI
Nemeth E, Rivera S, Gabayan V, et al. . IL-6 mediates hypoferremia of inflammation by inducing the synthesis of the iron regulatory hormone hepcidin. J Clin Invest 2004;113:1271–6. 10.1172/JCI200420945 PubMed DOI PMC