BioTIME: A database of biodiversity time series for the Anthropocene
Status PubMed-not-MEDLINE Jazyk angličtina Země Velká Británie, Anglie Médium print-electronic
Typ dokumentu časopisecké články
Grantová podpora
Wellcome Trust - United Kingdom
250189
European Research Council - International
PubMed
30147447
PubMed Central
PMC6099392
DOI
10.1111/geb.12729
PII: GEB12729
Knihovny.cz E-zdroje
- Klíčová slova
- biodiversity, global, spatial, species richness, temporal, turnover,
- Publikační typ
- časopisecké články MeSH
MOTIVATION: The BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community-led open-source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal patterns of biodiversity in the Anthropocene. MAIN TYPES OF VARIABLES INCLUDED: The database contains 8,777,413 species abundance records, from assemblages consistently sampled for a minimum of 2 years, which need not necessarily be consecutive. In addition, the database contains metadata relating to sampling methodology and contextual information about each record. SPATIAL LOCATION AND GRAIN: BioTIME is a global database of 547,161 unique sampling locations spanning the marine, freshwater and terrestrial realms. Grain size varies across datasets from 0.0000000158 km2 (158 cm2) to 100 km2 (1,000,000,000,000 cm2). TIME PERIOD AND GRAIN: BioTIME records span from 1874 to 2016. The minimal temporal grain across all datasets in BioTIME is a year. MAJOR TAXA AND LEVEL OF MEASUREMENT: BioTIME includes data from 44,440 species across the plant and animal kingdoms, ranging from plants, plankton and terrestrial invertebrates to small and large vertebrates. SOFTWARE FORMAT: .csv and .SQL.
Alexander von Humboldt Biological Resources Research Institute Bogotá DC Colombia
Anthropology University of Georgia Athens Georgia
Aquatic Survey and Monitoring Ltd ASML Durham United Kingdom
Australian Antarctic Division Channel Highway Kingston Tasmania Australia
Australian Centre of Field Robotics University of Sydney Sydney New South Wales Australia
AZTI Fundazioa Herrera Kaia Pasaia Spain
Bavarian Forest National Park Grafenau Germany
Biodiversity Research Center Academia Sinica Nankang Taipei Taiwan
Biology Department Drew University Madison New Jersey
Biology Department Grand Valley State University Allendale Michigan
Biology Department Oklahoma State University Oklahoma City Oklahoma
Biosciences Fisheries and Economics UiT The Arctic University of Norway Tromsø Norway
BirdWatch Ireland Kilcoole Wicklow Ireland
Botanical Department Faroese Museum of Natural History Torshavn Faroe Islands
Ceiba Consultoria Ambiental Bragança Paulista Brazil
Center for Forest Research Université du Québec à Montréal Montreal Quebec Canada
Center for Limnology University of Wisconsin Madison Wisconsin
Center for Tropical Forest Science Washington District of Columbia
Centro de Estudios Avanzados en Zonas Aridas La Serena Chile
Cetacean Research and Rescue Unit Banff United Kingdom
Channel Islands National Park U S National Park Service California Ventura California
Cold Spring Harbor Laboratory Cold Spring Harbor New York
College of Earth Ocean and Atmospheric Sciences Oregon State University Corvallis Oregon
College of Marine Science University of South Florida St Petersburg Florida
Coral Reef Ecology and Evolution Lab Biodiversity Research Centre Academia Sinica Taipei Taiwan
CREAF Universitat Autònoma de Barcelona Cerdanyola del Vallès Catalonia Spain
CSIC Global Ecology Unit CREAF CSIC UAB Bellaterra Catalonia Spain
CSIRO Land and Water Ecosciences Precinct Dutton Park Queensland Australia
CSIRO Oceans and Atmosphere Flagship Hobart Tasmania Australia
CSIRO Oceans and Atmosphere Queensland BioSciences Precinct St Lucia Brisbane Qld Australia
Dartmouth College Hanover New Hampshire
Departamento de Biología Facultad de Ciencias Universidad de La Serena La Serena Chile
Departamento de Biologia Vegetal UNICAMP Campinas Brazil
Department of Animal Physiology Eberhard Karls University Tübingen Tübingen Germany
Department of Biological and Environmental Sciences University of Gothenburg Gothenburg Sweden
Department of Biological Sciences Bridgewater State University Bridgewater Massachusetts
Department of Biological Sciences Macquarie University Sydney New South Wales Australia
Department of Biological Sciences Old Dominion University Norfolk Virginia
Department of Biological Sciences University of Idaho Moscow Idaho
Department of Biology Dalhousie University Halifax Nova Scotia Canada
Department of Biology Museum of Southwestern Biology University of New Mexico Albuquerque New Mexico
Department of Biology Saint Louis University Saint Louis Missouri
Department of Biology Tomsk State University Tomsk Russia
Department of Biology University of Bergen Bergen Norway
Department of Biology University of Louisiana at Lafayette Lafayette Louisiana
Department of Biology University of New Mexico Albuquerque New Mexico
Department of Biology University of North Carolina Chapel Hill North Carolina
Department of Biology University of Pisa Pisa CoNISMa Italy
Department of Biology University of Saskatchewan Saskatoon Saskatchewan Canada
Department of Biology University of York York United Kingdom
Department of Biology Utica College Utica New York
Department of Ecology French Institute of Pondicherry Puducherry India
Department of Ecology PPGE Federal University of Rio de Janeiro Rio de Janeiro Brazil
Department of Environmental Affairs Oceans and Coastal Research Cape Town South Africa
Department of Forest Ecology Silva Tarouca Research Institute Brno Czech Republic
Department of Forest Ecosystems and Society Oregon State University Corvallis Oregon
Department of Forest Resources University of Minnesota St Paul Minnesota
Department of Geobotany Faculty of Biology Moscow State University Moscow Russia
Department of Land Resources and Environmental Sciences Montana State University Bozeman Montana
Department of Life Sciences Imperial College London Ascot Berkshire United Kingdom
Department of Natural Sciences McPherson College McPherson Kansas
Department of Wildlife Ecology and Conservation University of Florida Gainesville FL
Department of Wildlife Ecology and Conservation University of Florida Gainesville Florida
Department of Wildlife Fish and Conservation Biology University of California Davis Davis California
Entomology University of Arizona Tucson Arizona
Environmental Sciences Department Federal University of São Carlos Sorocaba Brazil
Environmental Studies Department Drew University Madison New Jersey
Environmental Studies Program University of Colorado Boulder
Escola de Agronomia Universidade Federal de Goiás Goiânia Brazil
Ethica Ambiental Vila Velha Brazil
Field Station Fabrikschleichach University of Würzburg Rauhenebrach Germany
Florida State University Coastal and Marine Laboratory St Teresa Florida
Fynbos Node South African Environmental Observation Network Claremont South Africa
GEOMATRIX UAB Kaunas Lithuania
German Centre for Integrative Biodiversity Research Halle Jena Leipzig Leipzig Germany
Graduate University of Science and Technology VAST Hanoi Vietnam
Hawai'i Institute of Marine Biology University of Hawai'i at Mānoa Kaneohe Hawai'i USA
Hawkesbury Institute for the Environment Western Sydney University Penrith New South Wales Australia
Hopkins Marine Station Stanford University Stanford California
Icelandic Institute of Natural History Garðabær Iceland
Ichthyology Laboratory Fisheries and Aquaculture University of Aveiro Aveiro Portugal
INBO Research Institute for Nature and Forest Brussels Belgium
Informatics Institute University of Florida Gainesville Florida
INSTAAR University of Colorado Boulder Colorado
Institute for Marine and Antarctic Studies University of Tasmania Hobart Tasmania Australia
Institute of Ecology and Biodiversity Santiago Chile
Institute of Ecology and Biological Resources VAST Hanoi Vietnam
Institute of Marine Research His Norway
Institute of Oceanography National Taiwan University Taipei Taiwan
Instituto Florestal Seção de Ecologia Florestal São Paulo Brazil
Instituto Milenio de Oceanografía Universidad de Concepción Concepción Chile
Joint Nature Conservation Committee Aberdeen United Kingdom
Lab of Vegetation Ecology Instituto de Biociências Universidade Estadual Paulista Rio Claro Brazil
Laboratório de Ecologia e Restauração Florestal Fundação Espaço Eco Piracicaba São Paulo Brazil
Laboratory of Forest Biology Wrocław University Wroclaw Poland
Leibniz Institute for Baltic Sea Research Warnemünde Seestr 15 D 18119 Rostock Germany
Maine Department of Marine Resources Bangor Maine
Marine Biological Laboratory Woods Hole Massachusetts USA
Marine Biology Research Group Ghent University Gent Belgium
Marine Science Institute University of California Santa Barbara California
Marine Scotland Marine Laboratory Scottish Government Edinburgh United Kingdom
Memorial University St John's Newfoundland and Labrador Canada
Metapopulation Research Centre Faculty of Biosciences University of Helsinki Helsinki Finland
Monterey Bay Aquarium Research Institute Moss Landing California
Museu de Ciències Naturals de Granollers Catalunya Spain
National Institute of Oceanography Tel Shikmona Haifa Israel
National Museum of Marine Biology and Aquarium Pingtung County Taiwan
National Oceanography Centre University of Southampton Waterfront Campus Southampton United Kingdom
National Research Program U S Geological Survey Reston Virginia
Natural Resources Institute Finland University of Oulu Oulu Finland
Natural Sciences Bennington College Bennington Vermont
Norwegian Institute for Nature Research Trondheim Norway
Plymouth Marine Laboratory Plymouth United Kingdom
Polar Oceans Research Group Sheridan Montana
Resource Ecology Group Wageningen University Wageningen The Netherlands
School of Biological Sciences The University of Hong Kong Pok Fu Lam Hong Kong
School of Biological Sciences University of Aberdeen Aberdeen United Kingdom
School of Biology and Ecology Sustainability Solutions Initiative University of Maine Orono Maine
School of Biology and Ecology University of Maine Orono Maine
School of Geosciences University of Edinburgh Edinburgh United Kingdom
School of Science Edith Cowan University Joondalup Western Australia Australia
School of Zoology George S Wise Faculty of Life Sciences Tel Aviv University Tel Aviv Israel
SEO BirdLife Marine Programme Barcelona Spain
Shetland Oil Terminal Environmental Advisory Group St Andrews United Kingdom
Southeast Environmental Research Center Florida International University Miami Florida
Stream Biomonitoring Program Mainspring Conservation Trust Franklin North Carolina
Swiss Federal Institute for Forest Snow and Landscape Research Davos Dorf Switzerland
Systems Ecology Department of Ecological Science Vrije Universiteit Amsterdam The Netherlands
Tennenbaum Marine Observatories Network Smithsonian Institution Washington District of Columbia
Terrestrial Ecology Section Department of Biology University of Copenhagen Copenhagen Denmark
The National Institute of Water and Atmospheric Research Auckland New Zealand
The Warnell School of Forestry and Natural Resources University of Georgia Athens Georgia
Tulane University New Orleans Louisiana
U S Forest Service Pacific Northwest Research Laboratory Corvallis Oregon
UMR AMAP IRD CIRAD CNRS INRA Montpellier University Montpellier France
UNESCO Intergovernmental Oceanographic Commission IOC Project Office for IODE Oostende Belgium
Universidade do Extremo Sul Catarinense Criciúma Santa Catarina Brazil
University of Arizona Health Sciences Library University of Arizona Tucson Arizona
University of California Los Angeles Los Angeles California
Vermont Center for Ecostudies Hartford Vermont USA
Vietnam National Museum of Nature Hanoi Vietnam
Virginia Institute of Marine Science Gloucester Point Virginia
Wildlife Conservation Society Indonesia Program Bogor Indonesia
Zoological Institute Russian Academy Sciences St Petersburg Russia
Zoology Ryan Institute School of Natural Sciences NUI Galway Galway Ireland
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Recent advances in availability and synthesis of the economic costs of biological invasions
The recovery of European freshwater biodiversity has come to a halt
Elevated compositional change in plant assemblages linked to invasion
Global data on earthworm abundance, biomass, diversity and corresponding environmental properties
Estimating retention benchmarks for salvage logging to protect biodiversity
