Spectrum and frequencies of non GJB2 gene mutations in Czech patients with early non-syndromic hearing loss detected by gene panel NGS and whole-exome sequencing
Language English Country Denmark Media print-electronic
Document type Journal Article, Research Support, Non-U.S. Gov't
PubMed
32860223
DOI
10.1111/cge.13839
Knihovny.cz E-resources
- Keywords
- hearing loss, next-generation sequencing, non GJB2 patients, non-syndromic hearing loss,
- MeSH
- Child MeSH
- Adult MeSH
- Genetic Predisposition to Disease MeSH
- Deafness embryology genetics pathology MeSH
- Cadherin Related Proteins MeSH
- Cadherins genetics MeSH
- Connexin 26 genetics MeSH
- Humans MeSH
- Membrane Glycoproteins genetics MeSH
- Membrane Proteins genetics MeSH
- Intercellular Signaling Peptides and Proteins genetics MeSH
- Adolescent MeSH
- Young Adult MeSH
- Mutation genetics MeSH
- Myosins genetics MeSH
- Neoplasm Proteins genetics MeSH
- Hearing Loss epidemiology genetics pathology MeSH
- Exome Sequencing MeSH
- Serine Endopeptidases genetics MeSH
- Carrier Proteins genetics MeSH
- High-Throughput Nucleotide Sequencing MeSH
- Check Tag
- Child MeSH
- Adult MeSH
- Humans MeSH
- Adolescent MeSH
- Young Adult MeSH
- Male MeSH
- Female MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
- Geographicals
- Czech Republic epidemiology MeSH
- Names of Substances
- CDH23 protein, human MeSH Browser
- GJB2 protein, human MeSH Browser
- Cadherin Related Proteins MeSH
- Cadherins MeSH
- Connexin 26 MeSH
- LOXHD1 protein, human MeSH Browser
- Membrane Glycoproteins MeSH
- Membrane Proteins MeSH
- Intercellular Signaling Peptides and Proteins MeSH
- MYO15A protein, human MeSH Browser
- Myosins MeSH
- Neoplasm Proteins MeSH
- OTOF protein, human MeSH Browser
- OTOG protein, human MeSH Browser
- Serine Endopeptidases MeSH
- STRC protein, human MeSH Browser
- TMPRSS3 protein, human MeSH Browser
- Carrier Proteins MeSH
Non-syndromic autosomal recessive hearing loss is an extremely heterogeneous disease caused by mutations in more than 80 genes. We examined Czech patients with early/prelingual non-syndromic, presumably genetic hearing loss (NSHL) without known cause after GJB2 gene testing. Four hundred and twenty-one unrelated patients were examined for STRC gene deletions with quantitative comparative fluorescent PCR (QCF PCR), 197 unrelated patients with next-generation sequencing by custom-designed NSHL gene panels and 19 patients with whole-exome sequencing (WES). Combining all methods, we discovered the cause of the disease in 54 patients. The most frequent type of NSHL was DFNB16 (STRC), which was detected in 22 patients, almost half of the clarified patients. Other biallelic pathogenic mutations were detected in the genes: MYO15A, LOXHD1, TMPRSS3 (each gene was responsible for five clarified patients, CDH23 (four clarified patients), OTOG and OTOF (each gene was responsible for two clarified patients). Other genes (AIFM1, CABP2, DIAPH1, PTPRQ, RDX, SLC26A4, TBC1D24, TECTA, TMC1) that explained the cause of hearing impairment were further detected in only one patient for each gene. STRC gene mutations, mainly deletions remain the most frequent NSHL cause after mutations in the GJB2.
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