• This record comes from PubMed

Tuning the Diradical Character of Pentacene Derivatives via Non-Benzenoid Coupling Motifs

. 2023 May 10 ; 145 (18) : 10333-10341. [epub] 20230426

Status PubMed-not-MEDLINE Language English Country United States Media print-electronic

Document type Journal Article

The development of functional organic molecules requires structures of increasing size and complexity, which are typically obtained by the covalent coupling of smaller building blocks. Herein, with the aid of high-resolution scanning tunneling microscopy/spectroscopy and density functional theory, the coupling of a sterically demanded pentacene derivative on Au(111) into fused dimers connected by non-benzenoid rings was studied. The diradical character of the products was tuned according to the coupling section. In particular, the antiaromaticity of cyclobutadiene as the coupling motif and its position within the structure play a decisive role in shifting the natural orbital occupancies toward a stronger diradical electronic character. Understanding these structure-property relations is desirable not only for fundamental reasons but also for designing new complex and functional molecular structures.

See more in PubMed

Clair S.; de Oteyza D. G. Controlling a Chemical Coupling Reaction on a Surface: Tools and Strategies for On-Surface Synthesis. Chem. Rev. 2019, 119, 4717–4776. 10.1021/acs.chemrev.8b00601. PubMed DOI PMC

Wang T.; Zhu J. Confined On-Surface Organic Synthesis: Strategies and Mechanisms. Surf. Sci. Rep. 2019, 74, 97–140. 10.1016/j.surfrep.2019.05.001. DOI

Song S.; Su J.; Telychko M.; Li J.; Li G.; Li Y.; Su C.; Wu J.; Lu J. On-Surface Synthesis of Graphene Nanostructures with π-Magnetism. Chem. Soc. Rev. 2021, 50, 3238–3262. 10.1039/d0cs01060j. PubMed DOI

de Oteyza D. G.; Frederiksen T. Carbon-Based Nanostructures as a Versatile Platform for Tunable π-Magnetism. J. Phys.: Condens. Matter 2022, 34, 443001.10.1088/1361-648x/ac8a7f. PubMed DOI

Eisenhut F.; Kühne T.; García F.; Fernández S.; Guitián E.; Pérez D.; Trinquier G.; Cuniberti G.; Joachim C.; Peña D.; Moresco F. Dodecacene Generated on Surface: Reopening of the Energy Gap. ACS Nano 2020, 14, 1011–1017. 10.1021/acsnano.9b08456. PubMed DOI

Krüger J.; Eisenhut F.; Skidin D.; Lehmann T.; Ryndyk D. A.; Cuniberti G.; García F.; Alonso J. M.; Guitián E.; Pérez D.; Peña D.; Trinquier G.; Malrieu J.-P.; Moresco F.; Joachim C. Electronic Resonances and Gap Stabilization of Higher Acenes on a Gold Surface. ACS Nano 2018, 12, 8506–8511. 10.1021/acsnano.8b04046. PubMed DOI

Bendikov M.; Duong H. M.; Starkey K.; Houk K. N.; Carter E. A.; Wudl F. Oligoacenes: Theoretical Prediction of Open-Shell Singlet Diradical Ground States. J. Am. Chem. Soc. 2004, 126, 7416–7417. 10.1021/ja048919w. PubMed DOI

Yeh C.-N.; Chai J.-D. Role of Kekulé and Non-Kekulé Structures in the Radical Character of Alternant Polycyclic Aromatic Hydrocarbons: A TAO-DFT Study. Sci. Rep. 2016, 6, 30562.10.1038/srep30562. PubMed DOI PMC

Krüger J.; García F.; Eisenhut F.; Skidin D.; Alonso J. M.; Guitián E.; Pérez D.; Cuniberti G.; Moresco F.; Peña D. Decacene: On-Surface Generation. Angew. Chem. 2017, 129, 12107–12110. 10.1002/ange.201706156. PubMed DOI

Zuzak R.; Dorel R.; Kolmer M.; Szymonski M.; Godlewski S.; Echavarren A. M. Higher Acenes by On-Surface Dehydrogenation: From Heptacene to Undecacene. Angew. Chem. 2018, 130, 10660–10665. 10.1002/ange.201802040. PubMed DOI PMC

Clar E.; Stewart D. G. Aromatic Hydrocarbons. LXV. Triangulene Derivatives 1. J. Am. Chem. Soc. 1953, 75, 2667–2672. 10.1021/ja01107a035. DOI

Pavliček N.; Mistry A.; Majzik Z.; Moll N.; Meyer G.; Fox D. J.; Gross L. Synthesis and Characterization of Triangulene. Nat. Nanotechnol. 2017, 12, 308–311. 10.1038/nnano.2016.305. PubMed DOI

Mishra S.; Beyer D.; Eimre K.; Ortiz R.; Fernández-Rossier J.; Berger R.; Gröning O.; Pignedoli C. A.; Fasel R.; Feng X.; Ruffieux P. Collective All-Carbon Magnetism in Triangulene Dimers. Angew. Chem., Int. Ed. 2020, 59, 12041–12047. 10.1002/anie.202002687. PubMed DOI PMC

Mishra S.; Catarina G.; Wu F.; Ortiz R.; Jacob D.; Eimre K.; Ma J.; Pignedoli C. A.; Feng X.; Ruffieux P.; Fernández-Rossier J.; Fasel R. Observation of Fractional Edge Excitations in Nanographene Spin Chains. Nature 2021, 598, 287–292. 10.1038/s41586-021-03842-3. PubMed DOI

Hieulle J.; Castro S.; Friedrich N.; Vegliante A.; Lara F. R.; Sanz S.; Rey D.; Corso M.; Frederiksen T.; Pascual J. I.; Peña D. On-Surface Synthesis and Collective Spin Excitations of a Triangulene-Based Nanostar. Angew. Chem., Int. Ed. 2021, 60, 25224–25229. 10.1002/anie.202108301. PubMed DOI PMC

Cui P.; Zhang Q.; Zhu H.; Li X.; Wang W.; Li Q.; Zeng C.; Zhang Z. Carbon Tetragons as Definitive Spin Switches in Narrow Zigzag Graphene Nanoribbons. Phys. Rev. Lett. 2016, 116, 026802.10.1103/physrevlett.116.026802. PubMed DOI

Sánchez-Sánchez C.; Dienel T.; Nicolaï A.; Kharche N.; Liang L.; Daniels C.; Meunier V.; Liu J.; Feng X.; Müllen K.; Sánchez-Valencia J. R.; Gröning O.; Ruffieux P.; Fasel R. On-Surface Synthesis and Characterization of Acene-Based Nanoribbons Incorporating Four-Membered Rings. Chem.—Eur. J. 2019, 25, 12074–12082. 10.1002/chem.201901410. PubMed DOI

Cirera B.; Sánchez-Grande A.; de la Torre B.; Santos J.; Edalatmanesh S.; Rodríguez-Sánchez E.; Lauwaet K.; Mallada B.; Zbořil R.; Miranda R.; Gröning O.; Jelínek P.; Martín N.; Ecija D. Tailoring Topological Order and π-Conjugation to Engineer Quasi-Metallic Polymers. Nat. Nanotechnol. 2020, 15, 437–443. 10.1038/s41565-020-0668-7. PubMed DOI

Cheng S.; Xue Z.; Li C.; Liu Y.; Xiang L.; Ke Y.; Yan K.; Wang S.; Yu P. On-Surface Synthesis of Triangulene Trimers via Dehydration Reaction. Nat. Commun. 2022, 13, 1705.10.1038/s41467-022-29371-9. PubMed DOI PMC

Holec J.; Cogliati B.; Lawrence J.; Berdonces-Layunta A.; Herrero P.; Nagata Y.; Banasiewicz M.; Kozankiewicz B.; Corso M.; Oteyza D. G.; Jancarik A.; Gourdon A. A Large Starphene Comprising Pentacene Branches. Angew. Chem. 2021, 133, 7831–7837. 10.1002/ange.202016163. PubMed DOI

González-Herrero H.; Mendieta-Moreno J. I.; Edalatmanesh S.; Santos J.; Martín N.; Écija D.; Torre B.; Jelinek P. Atomic Scale Control and Visualization of Topological Quantum Phase Transition in π-Conjugated Polymers Driven by Their Length. Adv. Mater. 2021, 33, 2104495.10.1002/adma.202104495. PubMed DOI

Mohammed M. S. G.; Lawrence J.; García F.; Brandimarte P.; Berdonces-Layunta A.; Pérez D.; Sánchez-Portal D.; Peña D.; de Oteyza D. G. From Starphenes to Non-Benzenoid Linear Conjugated Polymers by Substrate Templating. Nanoscale Adv. 2021, 3, 2351–2358. 10.1039/d1na00126d. PubMed DOI PMC

Koch M.; Gille M.; Hecht S.; Grill L. Steering a Cycloaddition Reaction via the Surface Structure. Surf. Sci. 2018, 678, 194–200. 10.1016/j.susc.2018.05.014. DOI

Izydorczyk I.; Stoica O.; Krawiec M.; Blieck R.; Zuzak R.; Stępień M.; Echavarren A. M.; Godlewski S. On-Surface Synthesis of a Phenylene Analogue of Nonacene. Chem. Commun. 2022, 58, 4063–4066. 10.1039/d2cc00479h. PubMed DOI

Sánchez-Sánchez C.; Nicolaï A.; Rossel F.; Cai J.; Liu J.; Feng X.; Müllen K.; Ruffieux P.; Fasel R.; Meunier V. On-Surface Cyclization of Ortho -Dihalotetracenes to Four- and Six-Membered Rings. J. Am. Chem. Soc. 2017, 139, 17617–17623. 10.1021/jacs.7b10026. PubMed DOI

Mishra S.; Fatayer S.; Fernández S.; Kaiser K.; Peña D.; Gross L. Nonbenzenoid High-Spin Polycyclic Hydrocarbons Generated by Atom Manipulation. ACS Nano 2022, 16, 3264–3271. 10.1021/acsnano.1c11157. PubMed DOI

Di Giovannantonio M.; Eimre K.; Yakutovich A. V.; Chen Q.; Mishra S.; Urgel J. I.; Pignedoli C. A.; Ruffieux P.; Müllen K.; Narita A.; Fasel R. On-Surface Synthesis of Antiaromatic and Open-Shell Indeno[2,1- b ]Fluorene Polymers and Their Lateral Fusion into Porous Ribbons. J. Am. Chem. Soc. 2019, 141, 12346–12354. 10.1021/jacs.9b05335. PubMed DOI

Albrecht F.; Fatayer S.; Pozo I.; Tavernelli I.; Repp J.; Peña D.; Gross L. Selectivity in Single-Molecule Reactions by Tip-Induced Redox Chemistry. Science 2022, 377, 298–301. 10.1126/science.abo6471. PubMed DOI

Pavliček N.; Schuler B.; Collazos S.; Moll N.; Pérez D.; Guitián E.; Meyer G.; Peña D.; Gross L. On-Surface Generation and Imaging of Arynes by Atomic Force Microscopy. Nat. Chem. 2015, 7, 623–628. 10.1038/nchem.2300. PubMed DOI

Urgel J. I.; Di Giovannantonio M.; Gandus G.; Chen Q.; Liu X.; Hayashi H.; Ruffieux P.; Decurtins S.; Narita A.; Passerone D.; Yamada H.; Liu S.; Müllen K.; Pignedoli C. A.; Fasel R. Overcoming Steric Hindrance in Aryl-Aryl Homocoupling via On-Surface Copolymerization. ChemPhysChem 2019, 20, 2360–2366. 10.1002/cphc.201900283. PubMed DOI

Feng L.; Wang T.; Jia H.; Huang J.; Han D.; Zhang W.; Ding H.; Xu Q.; Du P.; Zhu J. On-Surface Synthesis of Planar Acenes via Regioselective Aryl–Aryl Coupling. Chem. Commun. 2020, 56, 4890–4893. 10.1039/d0cc01043j. PubMed DOI

Stuyver T.; Chen B.; Zeng T.; Geerlings P.; De Proft F.; Hoffmann R. Do Diradicals Behave Like Radicals?. Chem. Rev. 2019, 119, 11291–11351. 10.1021/acs.chemrev.9b00260. PubMed DOI

Minami T.; Nakano M. Diradical Character View of Singlet Fission. J. Phys. Chem. Lett. 2012, 3, 145–150. 10.1021/jz2015346. PubMed DOI

Mohammed M. S. G.; Colazzo L.; Robles R.; Dorel R.; Echavarren A. M.; Lorente N.; de Oteyza D. G. Electronic Decoupling of Polyacenes from the Underlying Metal Substrate by Sp3 Carbon Atoms. Commun. Phys. 2020, 3, 159.10.1038/s42005-020-00425-y. DOI

Wang T.; Lv H.; Fan Q.; Feng L.; Wu X.; Zhu J. Highly Selective Synthesis of Cis-Enediynes on a Ag(111) Surface. Angew. Chem., Int. Ed. 2017, 56, 4762–4766. 10.1002/anie.201701142. PubMed DOI

Rastgoo Lahrood A.; Björk J.; Heckl W. M.; Lackinger M. 1,3-Diiodobenzene on Cu(111) – an Exceptional Case of on-Surface Ullmann Coupling. Chem. Commun. 2015, 51, 13301–13304. 10.1039/c5cc04453g. PubMed DOI

Zugermeier M.; Gruber M.; Schmid M.; Klein B. P.; Ruppenthal L.; Müller P.; Einholz R.; Hieringer W.; Berndt R.; Bettinger H. F.; Gottfried J. M. On-Surface Synthesis of Heptacene and Its Interaction with a Metal Surface. Nanoscale 2017, 9, 12461–12469. 10.1039/c7nr04157h. PubMed DOI

Urgel J. I.; Hayashi H.; Di Giovannantonio M.; Pignedoli C. A.; Mishra S.; Deniz O.; Yamashita M.; Dienel T.; Ruffieux P.; Yamada H.; Fasel R. On-Surface Synthesis of Heptacene Organometallic Complexes. J. Am. Chem. Soc. 2017, 139, 11658–11661. 10.1021/jacs.7b05192. PubMed DOI

Huang J.; Pan Y.; Wang T.; Cui S.; Feng L.; Han D.; Zhang W.; Zeng Z.; Li X.; Du P.; Wu X.; Zhu J. Topology Selectivity in On-Surface Dehydrogenative Coupling Reaction: Dendritic Structure versus Porous Graphene Nanoribbon. ACS Nano 2021, 15, 4617–4626. 10.1021/acsnano.0c08920. PubMed DOI

Krug C. K.; Fan Q.; Fillsack F.; Glowatzki J.; Trebel N.; Heuplick L. J.; Koehler T.; Gottfried J. M. Organometallic Ring vs. Chain Formation beyond Kinetic Control: Steering Their Equilibrium in Two-Dimensional Confinement. Chem. Commun. 2018, 54, 9741–9744. 10.1039/c8cc05357j. PubMed DOI

Berdonces-Layunta A.; Schulz F.; Aguilar-Galindo F.; Lawrence J.; Mohammed M. S. G.; Muntwiler M.; Lobo-Checa J.; Liljeroth P.; de Oteyza D. G. Order from a Mess: The Growth of 5-Armchair Graphene Nanoribbons. ACS Nano 2021, 15, 16552–16561. 10.1021/acsnano.1c06226. PubMed DOI

Zuzak R.; Jančařík A.; Gourdon A.; Szymonski M.; Godlewski S. On-Surface Synthesis with Atomic Hydrogen. ACS Nano 2020, 14, 13316–13323. 10.1021/acsnano.0c05160. PubMed DOI PMC

Stolz S.; Di Giovannantonio M.; Urgel J. I.; Sun Q.; Kinikar A.; Borin Barin G.; Bommert M.; Fasel R.; Widmer R. Reversible Dehalogenation in On-Surface Aryl–Aryl Coupling. Angew. Chem., Int. Ed. 2020, 59, 14106–14110. 10.1002/anie.202005443. PubMed DOI

Riss A.; Paz A. P.; Wickenburg S.; Tsai H.-Z.; De Oteyza D. G.; Bradley A. J.; Ugeda M. M.; Gorman P.; Jung H. S.; Crommie M. F.; Rubio A.; Fischer F. R. Imaging Single-Molecule Reaction Intermediates Stabilized by Surface Dissipation and Entropy. Nat. Chem. 2016, 8, 678–683. 10.1038/nchem.2506. PubMed DOI

Colazzo L.; Mohammed M. S. G.; Dorel R.; Nita P.; García Fernández C.; Abufager P.; Lorente N.; Echavarren A. M.; de Oteyza D. G. On-Surface Synthesis of Heptacene on Ag(001) from Brominated and Non-Brominated Tetrahydroheptacene Precursors. Chem. Commun. 2018, 54, 10260–10263. 10.1039/c8cc04402c. PubMed DOI PMC

Wang T.; Pan Y.; Zhang W.; Lawrence J.; Mohammed M. S. G.; Huang J.; Feng L.; Berdonces-Layunta A.; Han D.; Xu Q.; Wu X.; Tait S. L.; de Oteyza D. G.; Zhu J. On-Surface Synthesis of a Five-Membered Carbon Ring from a Terminal Alkynyl Bromide: A [4 + 1] Annulation. J. Phys. Chem. Lett. 2020, 11, 5902–5907. 10.1021/acs.jpclett.0c01483. PubMed DOI

Merino-Díez N.; Lobo-Checa J.; Nita P.; Garcia-Lekue A.; Basagni A.; Vasseur G.; Tiso F.; Sedona F.; Das P. K.; Fujii J.; Vobornik I.; Sambi M.; Pascual J. I.; Ortega J. E.; de Oteyza D. G. Switching from Reactant to Substrate Engineering in the Selective Synthesis of Graphene Nanoribbons. J. Phys. Chem. Lett. 2018, 9, 2510–2517. 10.1021/acs.jpclett.8b00796. PubMed DOI

Piquero-Zulaica I.; Garcia-Lekue A.; Colazzo L.; Krug C. K.; Mohammed M. S. G.; Abd El-Fattah Z. M.; Gottfried J. M.; de Oteyza D. G.; Ortega J. E.; Lobo-Checa J. Electronic Structure Tunability by Periodic Meta -Ligand Spacing in One-Dimensional Organic Semiconductors. ACS Nano 2018, 12, 10537–10544. 10.1021/acsnano.8b06536. PubMed DOI

Soe W.-H.; Manzano C.; De Sarkar A.; Chandrasekhar N.; Joachim C. Direct Observation of Molecular Orbitals of Pentacene Physisorbed on Au(111) by Scanning Tunneling Microscope. Phys. Rev. Lett. 2009, 102, 176102.10.1103/physrevlett.102.176102. PubMed DOI

Krejčí O.; Hapala P.; Ondráček M.; Jelínek P. Principles and Simulations of High-Resolution STM Imaging with a Flexible Tip Apex. Phys. Rev. B 2017, 95, 045407.10.1103/physrevb.95.045407. DOI

Dressler J. J.; Teraoka M.; Espejo G. L.; Kishi R.; Takamuku S.; Gómez-García C. J.; Zakharov L. N.; Nakano M.; Casado J.; Haley M. M. Thiophene and Its Sulfur Inhibit Indenoindenodibenzothiophene Diradicals from Low-Energy Lying Thermal Triplets. Nat. Chem. 2018, 10, 1134–1140. 10.1038/s41557-018-0133-5. PubMed DOI

Mutoh K.; Toshimitsu S.; Kobayashi Y.; Abe J. Dynamic Spin–Spin Interaction Observed as Interconversion of Chemical Bonds in Stepwise Two-Photon Induced Photochromic Reaction. J. Am. Chem. Soc. 2021, 143, 13917–13928. 10.1021/jacs.1c06775. PubMed DOI

Feofanov M.; Akhmetov V.; Sharapa D. I.; Amsharov K. Oxidative Electrocyclization of Diradicaloids: C–C Bonds for Free or How to Use Biradical Character for π-Extension. Org. Lett. 2020, 22, 5741–5745. 10.1021/acs.orglett.0c01717. PubMed DOI

Feofanov M.; Akhmetov V.; Amsharov K. Domino Dehydrative Π-Extension: A Facile Path to Extended Perylenes and Terrylenes. Chem.—Eur. J. 2021, 27, 17322–17325. 10.1002/chem.202103098. PubMed DOI PMC

Watts L.; Fitzpatrick J. D.; Pettit R. Cyclobutadiene. J. Am. Chem. Soc. 1965, 87, 3253–3254. 10.1021/ja01092a049. DOI

Jacobse P. H.; Jin Z.; Jiang J.; Peurifoy S.; Yue Z.; Wang Z.; Rizzo D. J.; Louie S. G.; Nuckolls C.; Crommie M. F. Pseudo-Atomic Orbital Behavior in Graphene Nanoribbons with Four-Membered Rings. Sci. Adv. 2021, 7, eabl589210.1126/sciadv.abl5892. PubMed DOI PMC

Kawai S.; Takahashi K.; Ito S.; Pawlak R.; Meier T.; Spijker P.; Canova F. F.; Tracey J.; Nozaki K.; Foster A. S.; Meyer E. Competing Annulene and Radialene Structures in a Single Anti-Aromatic Molecule Studied by High-Resolution Atomic Force Microscopy. ACS Nano 2017, 11, 8122–8130. 10.1021/acsnano.7b02973. PubMed DOI

Zeng Z.; Guo D.; Wang T.; Chen Q.; Matěj A.; Huang J.; Han D.; Xu Q.; Zhao A.; Jelínek P.; de Oteyza D. G.; McEwen J.-S.; Zhu J. Chemisorption-Induced Formation of Biphenylene Dimer on Ag(111). J. Am. Chem. Soc. 2022, 144, 723–732. 10.1021/jacs.1c08284. PubMed DOI

Fan Q.; Yan L.; Tripp M. W.; Krejčí O.; Dimosthenous S.; Kachel S. R.; Chen M.; Foster A. S.; Koert U.; Liljeroth P.; Gottfried J. M. Biphenylene Network: A Nonbenzenoid Carbon Allotrope. Science 2021, 372, 852–856. 10.1126/science.abg4509. PubMed DOI

Alcón I.; Calogero G.; Papior N.; Antidormi A.; Song K.; Cummings A. W.; Brandbyge M.; Roche S. Unveiling the Multiradical Character of the Biphenylene Network and Its Anisotropic Charge Transport. J. Am. Chem. Soc. 2022, 144, 8278–8285. 10.1021/jacs.2c02178. PubMed DOI PMC

Find record

Citation metrics

Loading data ...

Archiving options

Loading data ...