Contrasting effects of agriculture and urbanisation on bird and reptile communities in a Mediterranean delta (Gediz Delta, Türkiye)

. 2025 Jun 03 ; 25 (1) : 58. [epub] 20250603

Jazyk angličtina Země Velká Británie, Anglie Médium electronic

Typ dokumentu časopisecké články

Perzistentní odkaz   https://www.medvik.cz/link/pmid40461972
Odkazy

PubMed 40461972
PubMed Central PMC12131356
DOI 10.1186/s12862-025-02390-y
PII: 10.1186/s12862-025-02390-y
Knihovny.cz E-zdroje

BACKGROUND: Wetlands have been some of the most destroyed ecosystems over the last century, with important land-use changes resulting from agricultural, industrial, and urban development. Gediz Delta is a large wetland on the Aegean coast of Western Türkiye with natural areas affected by conversion to agriculture and urban developments from the Izmir metropolis. We assessed the effects of landscape type (natural, agricultural, and urban) on the composition of breeding bird (90 species) and reptile (14 species) communities in the Gediz Delta between 2019 and 2021. We used generalized linear models to estimate the effect of landscape types on community indexes and joint species distribution models to assess how species-specific habitat preferences explained their responses to landscape type. RESULTS: Our results show that bird and reptile community compositions were impacted differently depending on landscape type. Landscape type significantly affected bird abundance and Shannon equality indices but had no significant effect on bird and reptile species richness. Natural landscapes accommodated higher bird abundance and lower diversity indexes than the other two landscapes. On the other hand, we found that urban and agricultural landscapes accommodated more generalist species than natural ones. Natural landscapes were preferred by Marine & Coastal and Inland wetland bird specialists and reptiles relying on Mediterranean Habitats. Overall, these results suggest that community composition encountered in different landscape types is explained by species' habitat specializations. CONCLUSIONS: We highlight the critical importance of natural landscapes for conserving specialist species within the Delta while showing the potential of agricultural areas for a few freshwater reptile species. These results imply that the Gediz Delta would benefit from biodiversity conservation planning to enhance the protection of natural habitats and mitigate the negative impacts of agricultural and urban development on bird and reptile populations.

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Galewski T, Devictor V. When common birds became rare: Historical records shed light on long-term responses of bird communities to global change in the largest wetland of France. Green AJ, editor. PLoS ONE. 2016;11:e0165542. PubMed PMC

Jaureguiberry P, Titeux N, Wiemers M, Bowler DE, Coscieme L, Golden AS, et al. The direct drivers of recent global anthropogenic biodiversity loss. Sci Adv. 2022;8:eabm9982. PubMed PMC

McKinney ML, Lockwood JL. Biotic homogenization: a few winners replacing many losers in the next mass extinction. Trends Ecol Evol. 1999;14:450–3. PubMed

Le Viol I, Jiguet F, Brotons L, Herrando S, Lindström A, Pearce-Higgins JW, et al. More and more generalists: two decades of changes in the European avifauna. Biol Lett. 2012;8:780–2. PubMed PMC

Devictor V, Julliard R, Couvet D, Lee A, Jiguet F. Functional homogenization effect of urbanization on bird communities. Conserv Biol. 2007;21:741–51. PubMed

Ovaskainen O, Rybicki J, Abrego N. What can observational data reveal about metacommunity processes? Ecography. 2019;42:1877–86.

Ovaskainen O, Abrego N. Joint species distribution modelling: With applications in R [Internet]. Cambridge: Cambridge University Press; 2020. Available from: https://www.cambridge.org/core/books/joint-species-distribution-modelling/0D9FA93EA1DD408332A17266449668B3

Morgado R, Pedroso R, Porto M, Herrera JM, Rego F, Moreira F, et al. Preserving wintering frugivorous birds in agro-ecosystems under land use change: lessons from intensive and super-intensive Olive orchards. J Appl Ecol. 2021;58:2975–86.

Northrup JM, Vander Wal E, Bonar M, Fieberg J, Laforge MP, Leclerc M, et al. Conceptual and methodological advances in habitat-selection modeling: guidelines for ecology and evolution. Ecol Appl. 2022;32:e02470. PubMed PMC

Antão LH, Weigel B, Strona G, Hällfors M, Kaarlejärvi E, Dallas T, et al. Climate change reshuffles Northern species within their niches. Nat Clim Change. 2022;12:587–92.

Spampinato G, Sciandrello S, Giusso del Galdo G, Puglisi M, Tomaselli V, Cannavo S, et al. Contribution to the knowledge of mediterranean wetland biodiversity: plant communities of the Aquila lake (Calabria, Southern Italy). Plant Sociol. 2019;56:53–68.

Davidson NC. How much wetland has the world lost? Long-term and recent trends in global wetland area. Mar Freshw Res. 2014;65:934–41.

Dixon MJR, Loh J, Davidson NC, Beltrame C, Freeman R, Walpole M. Tracking global change in ecosystem area: the wetland extent trends index. Biol Conserv. 2016;193:27–35.

Ramsar Convention on Wetlands. Global Wetland Outlook: State of the World’s wetlands and their services to people. [Internet]. Gland, Switzerland: Ramsar Convention Secretariat. 2018 p. 88. Available from: https://www.global-wetland-outlook.ramsar.org/outlook

Daoud-Bouattour A, Muller SD, Jamaa HF-B, Saad-Limam SB, Rhazi L, Soulié-Märsche I, et al. Conservation of mediterranean wetlands: interest of historical approach. CR Biol. 2011;334:742–56. PubMed

Geijzendorffer I, Chazée L, Gaget E, Galewski T, Guelmami A, Perennou C et al. Mediterranean wetlands outlook 2: Solutions for sustainable Mediterranean wetlands [Internet]. Tour du Valat, France: Secretariat of the Ramsar Convention; 2018. Available from: https://medwet.org/publications/med-wetlands-outlook-2-2018/

Johnson PTJ, Hoverman JT, McKenzie VJ, Blaustein AR, Richgels KLD. Urbanization and wetland communities: applying metacommunity theory to understand the local and landscape effects. J Appl Ecol. 2013;50:34–42.

Davidson NC, Fluet-Chouinard E, Finlayson CM. Global extent and distribution of wetlands: trends and issues. Mar Freshw Res. 2018;69:620–7.

Mao Q, Liao C, Wu Z, Guan W, Yang W, Tang Y, et al. Effects of land cover pattern along urban-rural gradient on bird diversity in wetlands. Diversity. 2019;11:86.

Mallet P, Béchet A, Galewski T, Mesléard F, Hilaire S, Lefebvre G, et al. Different components of landscape complexity are necessary to preserve multiple taxonomic groups in intensively-managed rice paddy landscapes. Agric Ecosyst Environ. 2022;328:107864.

Kingsford RT, Basset A, Jackson L. Wetlands: conservation’s poor cousins. Aquat Conservation: Mar Freshw Ecosyst. 2016;26:892–916.

Kingsford RT, Bino G, Finlayson CM, Falster D, Fitzsimons JA, Gawlik DE et al. Ramsar wetlands of international importance–improving conservation outcomes. Frontiers in Environmental Science [Internet]. 2021 [cited 2021 Mar 23];9. Available from: https://www.frontiersin.org/articles/10.3389/fenvs.2021.643367/full?&utm_source=Email_to_authors_&utm_medium=Email&utm_content=T1_11.5e1_author&utm_campaign=Email_publication&field=&journalName=Frontiers_in_Environmental_Science&id=643367 DOI

Kendal D, Egerer M, Byrne JA, Jones PJ, Marsh P, Threlfall CG, et al. City-size bias in knowledge on the effects of urban nature on people and biodiversity. Environ Res Lett. 2020;15:124035.

Newbold T, Bentley LF, Hill SL, Edgar MJ, Horton M, Su G, et al. Global effects of land use on biodiversity differ among functional groups. Funct Ecol. 2020;34:684–93.

Fois M, Cuena-Lombraña A, Bacchetta G. Knowledge gaps and challenges for conservation of Mediterranean wetlands: Evidence from a comprehensive inventory and literature analysis for Sardinia. Aquatic Conservation: Marine and Freshwater Ecosystems [Internet]. 2021 [cited 2025 Jan 31];31. Available from: https://onlinelibrary.wiley.com/doi/10.1002/aqc.3659

Ernoul L, Sandoz A, Fellague A. The evolution of two great mediterranean deltas: remote sensing to visualize the evolution of habitats and land use in the Gediz and Rhone deltas. Ocean Coastal Manage. 2012;69:111–7.

Arslan D, Çiçek K, Döndüren Ö, Ernoul L. Threat ranking to improve conservation planning: an example from the Gediz delta, Turkey. Land. 2021;10:1381.

Guelmami A, Arslan D, Ernoul L. Assessing the impacts of land use and land cover changes 1984–2020 on wetland habitats in the Gediz Delta (Turkey). Climatic and Environmental Significance of Wetlands: Case Studies from Eurasia and North Africa [Internet]. IGI Global; 2023 [cited 2024 Aug 12]. pp. 12–23. DOI: 10.4018/978-1-7998-9289-2.ch002. Available from: https://www.igi-global.com/chapter/assessing-the-impacts-of-land-use-and-land-cover-changes-1984-2020-on-wetland-habitats-in-the-gediz-delta-turkey/www.igi-global.com/chapter/assessing-the-impacts-of-land-use-and-land-cover-changes-1984-2020-on-wetland-habitats-in-the-gediz-delta-turkey/316197

TUIK TSI. Address based population registration system results, 2019 [Internet]. 2020 [cited 2020 Aug 12]. Available from: https://data.tuik.gov.tr/Bulten/Index?P=Adrese-Dayali-Nufus-Kayit-Sistemi-Sonuclari-2019-33705

RIS RSIS. Information sheet on ramsar wetlands (RIS) – 2006–2008 version [Internet]. https://rsis.ramsar.org/. 2021. Available from: Available for download from http://www.ramsar.org/ris/key_ris_index.htm

Gediz Delta Management Plan. Gediz deltası Sulak Alan Yönetim Planı, [Gediz Delta management plan]. Turkey: İzmir; 2007. p. 424.

Onmuş O, Durusoy R, Eken G. Distribution of breeding birds in the Gediz delta, Western Turkey: (Aves). Zool Middle East. 2009;47:39–48.

Arslan D, Oliver A, Yaşar Ç, Ismail İB, Döndüren Ö, Ernoul L, et al. Distribution and current status of herpetofauna in the Gediz Delta (Western Anatolia, Turkey). Herpetology Notes. 2018;11:1–15.

Bolca M, Özen F, Güneş A. Land use changes in Gediz Delta (Turkey) and their negative impacts on wetland habitats. J Coastal Res. 2014;30:756–64.

Avdan AO. The making of consurbia: Conservation, urbanization, and socio-environmental change in Turkey’s Gediz Delta [Internet] [Thesis]. Arts & Social Sciences: Department of Sociology and Anthropology, Simon Fraser University; 2020 [cited 2021 Jul 16]. Available from: http://summit.sfu.ca/item/20248

Balkız Ö. Metapopulation dynamics of the greater flamingo in the Mediterranean (implications for conservation) [PhD Thesis]. [Montpellier]: Université de Montpellier 2 Sciences et Techniques du Languedoc; 2006.

Onmuş O, Sıkı M. Impacts of anthropogenic activities and habitat degradation on breeding waterbirds. Turkish J Zool. 2013;37:249–61.

Arslan D, Olivier A, Ernoul L, Béchet A, Çiçek K. Demography, distribution, and threat assessment of the Spur-thighed tortoise (Testudo graeca) in the Gediz delta, Turkey (Reptilia: Testudines). Zool Middle East. 2021;67:216–27.

Eken G, Bozdoğan M, İsfendiyaroğlu S, Kılıç DT, Lise Y. Türkiye’nin önemli Doğa Alanları. Turkey: Doğa Derneği;: Ankara; 2006.

Ramsar Convention Secretariat. The fourth strategic plan 2016–2024. Ramsar handbooks for wise use of wetlands [Internet]. Gland, Switzerland: Ramsar Convention Secretariat. 2016 p. 56. Report No.: 5th edition, Vol. 2. Available from: https://www.ramsar.org/sites/default/files/hb2_5ed_strategic_plan_2016_24_e.pdf

Arslan D, Ernoul L, Béchet A, Döndüren Ö, Sıkı M, Galewski T et al. Using literature and expert knowledge to determine changes in the bird community over a century in a Turkish wetland. Mar Freshwater Res [Internet]. 2022 [cited 2022 Oct 26];Online. Available from: https://www.publish.csiro.au/mf/MF21332

Gaget E, Le Viol I, Pavón-Jordán D, Cazalis V, Kerbiriou C, Jiguet F, et al. Assessing the effectiveness of the Ramsar convention in preserving wintering waterbirds in the mediterranean. Biol Conserv. 2020;243:108485.

Mediterranean Wetland Observatory. Land cover - Spatial dynamics in Mediterranean coastal wetlands from 1975 to 2005. Thematic collection, issue #2. [Internet]. France: Tour du Valat. 2014 p. 48. Available from: http://www.tourduvalat.org/en/actualites/publications/mwo_report_land_cover_spatial_dynamics_mediterranean_coastal_wetlands_1975

Perennou C, Guelmami A, Paganini M, Philipson P, Poulin B, Strauch A, et al. Mapping mediterranean wetlands with remote sensing: A good-looking map is not always a good map. Adv Ecol Res. 2018;58:243–77.

Greenwood JJ. The monitoring of British breeding birds: a success story for conservation science? Sci Total Environ. 2003;310:221–30. PubMed

Ward RJ, Griffiths RA, Wilkinson JW, Cornish N. Optimising monitoring efforts for secretive snakes: a comparison of occupancy and N-mixture models for assessment of population status. Sci Rep. 2017;7:18074. PubMed PMC

Hill MO. Diversity and evenness: A unifying notation and its consequences. Ecology. 1973;54:427–32.

Brooks M, Bolker B, Kristensen K, Maechler M, Magnusson A, McGillycuddy M et al. glmmTMB: Generalized linear mixed models using template model builder [Internet]. 2024 [cited 2024 Aug 23]. Available from: https://cran.r-project.org/web/packages/glmmTMB/index.html

Zuur AF, Ieno EN, Walker NJ, Saveliev AA, Smith GM. Mixed effects models and extensions in ecology with R. 1st ed. New York, NY: Springer; 2009.

Hartig F, Lohse L, DHARMa. Residual diagnostics for hierarchical (Multi-Level / Mixed) regression models [Internet]. 2022 [cited 2024 Aug 23]. Available from: https://cran.r-project.org/web/packages/DHARMa/index.html

Ovaskainen O, Tikhonov G, Norberg A, Guillaume Blanchet F, Duan L, Dunson D, et al. How to make more out of community data? A conceptual framework and its implementation as models and software. Ecol Lett. 2017;20:561–76. PubMed

Keller V, Herrando S, Voríšek P, Franch M, Kipson M, Milanesi P et al. European breeding bird atlas 2: Distribution, abundance and change [Internet]. Barcelona, Spain: European Bird Census Council & Lynx Edicions; 2020. Available from: https://ebba2.info/about/book/

Baran İ, Atatür MK. Türkiye Herpetofaunası (kurbağa ve sürüngenler)[Turkish herpetofauna (amphibians and reptiles)]. Ankara: TC Çevre Bakanlığı Yayını; 1998. p. 209.

Yaşar Ç, Çiçek K, Mulder J, Tok CV. The distribution and biogeography of amphibians and reptiles in Turkey. North-Western J Zool. 2021;17(2):232–75.

Ovaskainen O, Abrego N. Joint species distribution modelling: With applications in R [Internet]. Cambridge: Cambridge University Press; 2020 [cited 2022 Jan 12]. Available from: https://www.cambridge.org/core/books/joint-species-distribution-modelling/0D9FA93EA1DD408332A17266449668B3

Gelman A, Rubin DB. Inference from iterative simulation using multiple sequences. Stat Sci. 1992;7:457–72.

Tikhonov G, Opedal ØH, Abrego N, Lehikoinen A, de Jonge MMJ, Oksanen J, et al. Joint species distribution modelling with the r-package Hmsc. Methods Ecol Evol. 2020;11:442–7. PubMed PMC

Tourenq C, Bennetts RE, Kowalski H, Vialet E, Lucchesi J-L, Kayser Y, et al. Are ricefields a good alternative to natural marshes for waterbird communities in the Camargue, Southern France? Biol Conserv. 2001;100:335–43.

Efe R. Environmental change and wetland management: A case study in the Gediz Delta ecosystem (Western Turkey). Sofia, Bulgaria: Sofia University St. Kliment Ohridski Faculty of Geology and Geography; 2007. pp. 16–22.

Rigal S, Dakos V, Alonso H, Auniņš A, Benkő Z, Brotons L, et al. Farmland practices are driving bird population decline across Europe. Proc Natl Acad Sci U S A. 2023;120:e2216573120. PubMed PMC

Palacín C, Alonso JC. Failure of EU biodiversity strategy in mediterranean farmland protected areas. J Nat Conserv. 2018;42:62–6.

Butler SJ, Boccaccio L, Gregory RD, Vorisek P, Norris K. Quantifying the impact of land-use change to European farmland bird populations. Agric Ecosyst Environ. 2010;137:348–57.

Chace JF, Walsh JJ. Urban effects on native avifauna: a review. Landsc Urban Plann. 2006;74:46–69.

Brambilla M, Rizzolli F, Franzoi A, Caldonazzi M, Zanghellini S, Pedrini P. A network of small protected areas favoured generalist but not specialized wetland birds in a 30-year period. Biol Conserv. 2020;248:108699.

Barrett K, Guyer C. Differential responses of amphibians and reptiles in riparian and stream habitats to land use disturbances in Western Georgia, USA. Biol Conserv. 2008;141:2290–300.

Hager HA. Area-sensitivity of reptiles and amphibians: are there indicator species for habitat fragmentation? Écoscience. 1998;5:139–47.

Weller MW. Wetland birds: Habitat resources and conservation implications [Internet]. UK: Cambridge University Press; 1999. Available from: 10.1017/CBO9780511541919

Ewers RM, Didham RK. Confounding factors in the detection of species responses to habitat fragmentation. Biol Rev. 2006;81:117–42. PubMed

Mistry J, Berardi A, Simpson M. Birds as indicators of wetland status and change in the North Rupununi, Guyana. Biodivers Conserv. 2008;17:2383.

Robledano F, Esteve MA, Farinós P, Carreño MF, Martínez-Fernández J. Terrestrial birds as indicators of agricultural-induced changes and associated loss in conservation value of mediterranean wetlands. Ecol Ind. 2010;10:274–86.

de Castro-Expósito A, García-Muñoz E, Guerrero F. Reptile diversity in a mediterranean wetlands landscape (Alto guadalquivir region, southeastern Spain): are they affected by human impacts? Acta Herpetologica. 2021;16:27–36.

Kampichler C, Van Turnhout CA, Devictor V, Van Der Jeugd HP. Large-scale changes in community composition: determining land use and climate change signals. PLoS ONE. 2012;7:e35272. PubMed PMC

Johnston A, Fink D, Reynolds MD, Hochachka WM, Sullivan BL, Bruns NE, et al. Abundance models improve Spatial and Temporal prioritization of conservation resources. Ecol Appl. 2015;25:1749–56. PubMed

Schutz AJ, Driscoll DA. Common reptiles unaffected by connectivity or condition in a fragmented farming landscape. Austral Ecol. 2008;33:641–52.

Vallejo BM, Aloy AB, Ong PS. The distribution, abundance and diversity of birds in Manila’s last greenspaces. Landsc Urban Plann. 2009;89:75–85.

Boissinot A, Besnard A, Lourdais O. Amphibian diversity in farmlands: combined influences of breeding-site and landscape attributes in Western France. Agric Ecosyst Environ. 2019;269:51–61.

Goertzen D, Suhling F. Urbanization versus other land use: diverging effects on dragonfly communities in Germany. Divers Distrib. 2019;25:38–47.

Atis E. Economic impacts on cotton production due to land degradation in the Gediz delta, Turkey. Land Use Policy. 2006;23:181–6.

Sıkı M. Gediz Deltasi’ndaki İzmir Kuş cennetini Yaşatma mücadelesi (1982–2018). İzmir, Turkey: Kanguru Yayınları; 2020.

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