Nejvíce citovaný článek - PubMed ID 31641747
Photosynthesis: basics, history and modelling
Cyanobacteria hold great potential to revolutionize conventional industries and farming practices with their light-driven chemical production. To fully exploit their photosynthetic capacity and enhance product yield, it is crucial to investigate their intricate interplay with the environment including the light intensity and spectrum. Mathematical models provide valuable insights for optimizing strategies in this pursuit. In this study, we present an ordinary differential equation-based model for the cyanobacterium Synechocystis sp. PCC 6803 to assess its performance under various light sources, including monochromatic light. Our model can reproduce a variety of physiologically measured quantities, e.g. experimentally reported partitioning of electrons through four main pathways, O2 evolution, and the rate of carbon fixation for ambient and saturated CO2. By capturing the interactions between different components of a photosynthetic system, our model helps in understanding the underlying mechanisms driving system behavior. Our model qualitatively reproduces fluorescence emitted under various light regimes, replicating Pulse-amplitude modulation (PAM) fluorometry experiments with saturating pulses. Using our model, we test four hypothesized mechanisms of cyanobacterial state transitions for ensemble of parameter sets and found no physiological benefit of a model assuming phycobilisome detachment. Moreover, we evaluate metabolic control for biotechnological production under diverse light colors and irradiances. We suggest gene targets for overexpression under different illuminations to increase the yield. By offering a comprehensive computational model of cyanobacterial photosynthesis, our work enhances the basic understanding of light-dependent cyanobacterial behavior and sets the first wavelength-dependent framework to systematically test their producing capacity for biocatalysis.
- MeSH
- biologické modely * MeSH
- fotosyntéza * fyziologie MeSH
- fykobilizomy metabolismus MeSH
- koloběh uhlíku fyziologie MeSH
- oxid uhličitý metabolismus MeSH
- počítačová simulace MeSH
- světlo * MeSH
- Synechocystis * metabolismus fyziologie MeSH
- výpočetní biologie MeSH
- Publikační typ
- časopisecké články MeSH
- Názvy látek
- fykobilizomy MeSH
- oxid uhličitý MeSH
To keep up with the growth of human population and to circumvent deleterious effects of global climate change, it is essential to enhance crop yield to achieve higher production. Here we review mathematical models of oxygenic photosynthesis that are extensively used, and discuss in depth a subset that accounts for diverse approaches providing solutions to our objective. These include models (1) to study different ways to enhance photosynthesis, such as fine-tuning antenna size, photoprotection and electron transport; (2) to bioengineer carbon metabolism; and (3) to evaluate the interactions between the process of photosynthesis and the seasonal crop dynamics, or those that have included statistical whole-genome prediction methods to quantify the impact of photosynthesis traits on the improvement of crop yield. We conclude by emphasizing that the results obtained in these studies clearly demonstrate that mathematical modelling is a key tool to examine different approaches to improve photosynthesis for better productivity, while effective multiscale crop models, especially those that also include remote sensing data, are indispensable to verify different strategies to obtain maximized crop yields.
- Klíčová slova
- C4 rice, Improving photosynthesis and crop yield, Leaf and crop models, Photorespiration bypasses, Photosynthesis models, Synthetic biology,
- MeSH
- biologické modely MeSH
- fotosyntéza * fyziologie MeSH
- listy rostlin * fyziologie metabolismus růst a vývoj MeSH
- teoretické modely MeSH
- transport elektronů MeSH
- zemědělské plodiny * růst a vývoj genetika fyziologie MeSH
- Publikační typ
- časopisecké články MeSH
- přehledy MeSH
We honor Professor Hartmut Karl Lichtenthaler, a versatile pioneer of photosynthesis research, plant physiology, isoprenoid biochemistry, and stress physiology of plants, for his groundbreaking and creative contributions to plant science. His innovative research on the chemical composition, ultrastructure, and function of chloroplasts and his detection of the major methylerythritol 4-phosphate (MEP) isoprenoid biosynthetic pathway in plants is key to our current understanding of the physiology and biochemistry of photosynthesis systems. His ingenious use of the powerful laser-induced chlorophyll a fluorescence imaging has helped us better understand the stress response processes in plant leaves. In this tribute, we present a summary of Lichtenthaler's career, significant scientific contributions, editorial engagement, promotion of international cooperation, many honors, and awards, as well as his devotion to hiking and mountaineering.
- Klíčová slova
- DOXP/MEP pathway, chlorophyll fluorescence, chloroplast ultrastructure, fluorescence imaging of photosynthetic function, isoprenoid biosynthesis, mode of action of herbicides, phylloquinone K1, plastoglobuli, sun/shade-type chloroplasts, the Berkeley Spirit,
- MeSH
- botanika dějiny MeSH
- dějiny 20. století MeSH
- dějiny 21. století MeSH
- fotosyntéza * MeSH
- Check Tag
- dějiny 20. století MeSH
- dějiny 21. století MeSH
- Publikační typ
- časopisecké články MeSH
- historické články MeSH
Natural SiO2 nanoparticles (SiO2-NPs) are widely distributed in the environment, and at the same time, synthetic SiO2-NP may be applied in agriculture. Evaluations of physiological responses to SiO2-NPs treatment of plants are controversial. They are often performed at adaxial leaf sides whereas NPs permeate leaf tissues through stomata located at the abaxial leaf side in the majority of bifacial plants. We measured coefficients of the functional dorsoventral asymmetry of NPs-stressed Chelidonium majus leaves, S, by values of the CO2 assimilation rate (SP N), dark respiration (SR), maximal and operating quantum yields of photosystem II (SFv/Fm, SFv'/Fm'; using PAM-fluorometry), and oxygen coefficients of photosynthesis (SΨO2; using photoacoustics). The results indicated that SP N and SΨO2 were significantly influenced by SiO2-NPs treatment, since P N and ΨO2 were declining more markedly when the light was directed to the abaxial side of leaves compared to the adaxial side. Overall, SiO2-NPs-induced stress increased 'anoxygenity' of photosynthesis.
- Klíčová slova
- CO2 assimilation kinetics, cyclic electron transport around PSII, energy storage, photobaric signal, photothermal signal, transpiration kinetics,
- Publikační typ
- časopisecké články MeSH
Oxygenic photosynthesis takes place in thylakoid membranes (TM) of cyanobacteria, algae, and higher plants. It begins with light absorption by pigments in large (modular) assemblies of pigment-binding proteins, which then transfer excitation energy to the photosynthetic reaction centers of photosystem (PS) I and PSII. In green algae and plants, these light-harvesting protein complexes contain chlorophylls (Chls) and carotenoids (Cars). However, cyanobacteria, red algae, and glaucophytes contain, in addition, phycobiliproteins in phycobilisomes that are attached to the stromal surface of TM, and transfer excitation energy to the reaction centers via the Chl a molecules in the inner antennas of PSI and PSII. The color and the intensity of the light to which these photosynthetic organisms are exposed in their environment have a great influence on the composition and the structure of the light-harvesting complexes (the antenna) as well as the rest of the photosynthetic apparatus, thus affecting the photosynthetic process and even the entire organism. We present here a perspective on 'Light Quality and Oxygenic Photosynthesis', in memory of George Christos Papageorgiou (9 May 1933-21 November 2020; see notes a and b). Our review includes (1) the influence of the solar spectrum on the antenna composition, and the special significance of Chl a; (2) the effects of light quality on photosynthesis, measured using Chl a fluorescence; and (3) the importance of light quality, intensity, and its duration for the optimal growth of photosynthetic organisms.
Effects of salinity caused by 150 mM NaCl on primary photochemical reactions and some physiological and biochemical parameters (K+/Na+ ratio, soluble sugars, proline, MDA) have been studied in five Triticum aestivum L. genotypes with contrasting salt tolerance. It was found that 150 mM NaCl significantly decreased the photosynthetic efficiency of two sensitive genotypes. The K+/Na+ ratio decreased in all genotypes exposed to salinity stress when compared with the control. Salinity stress also caused lipid peroxidation and accumulation of soluble sugars and proline. The amounts of soluble sugars and proline were higher in tolerant genotypes than sensitive ones, and lipid peroxidation was higher in sensitive genotypes. The noninvasive measurements of photosynthesis-related parameters indicated the genotype-dependent effects of salinity stress on the photosynthetic apparatus. The significant decrease of chlorophyll content (SPAD values) or adverse effects on photosynthetic functions at the PSII level (measured by the chlorophyll fluorescence parameters) were observed in the two sensitive genotypes only. Although the information obtained by different fast noninvasive techniques were consistent, the correlation analyses identified the highest correlation of the noninvasive records with MDA, K+/Na+ ratio, and free proline content. The lower correlation levels were found for chlorophyll content (SPAD) and Fv/Fm values derived from chlorophyll fluorescence. Performance index (PIabs) derived from fast fluorescence kinetics, and F735/F685 ratio correlated well with MDA and Na+ content. The most promising were the results of linear electron flow measured by MultispeQ sensor, in which we found a highly significant correlation with all parameters assessed. Moreover, the noninvasive simultaneous measurements of chlorophyll fluorescence and electrochromic band shift using this sensor indicated the apparent proton leakage at the thylakoid membranes resulting in a high proton conductivity (gH+), present in sensitive genotypes only. The possible consequences for the photosynthetic functions and the photoprotection are discussed.
- Klíčová slova
- Chlorophyll fluorescence, Noninvasive measurements, Salt stress, Wheat,
- MeSH
- chlorofyl MeSH
- elektrony MeSH
- fotosyntéza MeSH
- genotyp MeSH
- protony MeSH
- pšenice * genetika MeSH
- solný stres MeSH
- tylakoidy * MeSH
- Publikační typ
- časopisecké články MeSH
- Názvy látek
- chlorofyl MeSH
- protony MeSH
Foundations of photosynthesis research have been established mainly by studying the response of plants to changing light, typically to sudden exposure to a constant light intensity after dark acclimation or light flashes. This approach remains valid and powerful, but can be limited by requiring dark acclimation before time-domain measurements and often assumes that rate constants determining the photosynthetic response do not change between dark and light acclimation. We show that these limits can be overcome by measuring plant responses to sinusoidally modulated light of varying frequency. By its nature, such frequency-domain characterization is performed in light-acclimated plants with no need for prior dark acclimation. Amplitudes, phase shifts, and upper harmonic modulation extracted from the data for a wide range of frequencies can target different kinetic domains and regulatory feedbacks. The occurrence of upper harmonic modulation reflects nonlinear phenomena, including photosynthetic regulation. To support these claims, we measured chlorophyll fluorescence emission of the green alga Chlorella sorokiniana in light that was sinusoidally modulated in the frequency range 1000-0.001 Hz. Based on these experimental data and numerical as well as analytical mathematical models, we propose that frequency-domain measurements can become a versatile tool in plant sensing.
