-
Something wrong with this record ?
Retrograde nuclear transport from the cytoplasm is required for tRNATyr maturation in T. brucei
AC. Kessler, SS. Kulkarni, MJ. Paulines, MAT. Rubio, PA. Limbach, Z. Paris, JD. Alfonzo,
Language English Country United States
Document type Journal Article, Research Support, N.I.H., Extramural, Research Support, Non-U.S. Gov't, Research Support, U.S. Gov't, Non-P.H.S.
NLK
Free Medical Journals
from 2004 to 1 year ago
Freely Accessible Science Journals
from 2004
PubMed Central
from 2009 to 1 year ago
Europe PubMed Central
from 2009 to 1 year ago
- MeSH
- Active Transport, Cell Nucleus MeSH
- Cell Nucleus genetics metabolism MeSH
- Cytoplasm genetics metabolism MeSH
- Kinetics MeSH
- Nucleic Acid Conformation MeSH
- Nucleoside Q metabolism MeSH
- Pentosyltransferases genetics metabolism MeSH
- RNA, Transfer, Phe genetics metabolism MeSH
- RNA, Transfer, Tyr genetics metabolism MeSH
- Saccharomyces cerevisiae genetics metabolism MeSH
- RNA Splicing MeSH
- RNA Transport MeSH
- Trypanosoma brucei brucei genetics metabolism MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
- Research Support, N.I.H., Extramural MeSH
- Research Support, U.S. Gov't, Non-P.H.S. MeSH
Retrograde transport of tRNAs from the cytoplasm to the nucleus was first described in Saccharomyces cerevisiae and most recently in mammalian systems. Although the function of retrograde transport is not completely clear, it plays a role in the cellular response to changes in nutrient availability. Under low nutrient conditions tRNAs are sent from the cytoplasm to nucleus and presumably remain in storage there until nutrient levels improve. However, in S. cerevisiae tRNA retrograde transport is constitutive and occurs even when nutrient levels are adequate. Constitutive transport is important, at least, for the proper maturation of tRNAPhe, which undergoes cytoplasmic splicing, but requires the action of a nuclear modification enzyme that only acts on a spliced tRNA. A lingering question in retrograde tRNA transport is whether it is relegated to S. cerevisiae and multicellular eukaryotes or alternatively, is a pathway with deeper evolutionary roots. In the early branching eukaryote Trypanosoma brucei, tRNA splicing, like in yeast, occurs in the cytoplasm. In the present report, we have used a combination of cell fractionation and molecular approaches that show the presence of significant amounts of spliced tRNATyr in the nucleus of T. brucei. Notably, the modification enzyme tRNA-guanine transglycosylase (TGT) localizes to the nucleus and, as shown here, is not able to add queuosine (Q) to an intron-containing tRNA. We suggest that retrograde transport is partly the result of the differential intracellular localization of the splicing machinery (cytoplasmic) and a modification enzyme, TGT (nuclear). These findings expand the evolutionary distribution of retrograde transport mechanisms to include early diverging eukaryotes, while highlighting its importance for queuosine biosynthesis.
References provided by Crossref.org
- 000
- 00000naa a2200000 a 4500
- 001
- bmc19001189
- 003
- CZ-PrNML
- 005
- 20190115120646.0
- 007
- ta
- 008
- 190107s2018 xxu f 000 0|eng||
- 009
- AR
- 024 7_
- $a 10.1080/15476286.2017.1377878 $2 doi
- 035 __
- $a (PubMed)28901827
- 040 __
- $a ABA008 $b cze $d ABA008 $e AACR2
- 041 0_
- $a eng
- 044 __
- $a xxu
- 100 1_
- $a Kessler, Alan C $u a Department of Microbiology , The Ohio State University , Columbus , Ohio , USA. c The Center for RNA Biology, The Ohio State University , Columbus , Ohio , USA.
- 245 10
- $a Retrograde nuclear transport from the cytoplasm is required for tRNATyr maturation in T. brucei / $c AC. Kessler, SS. Kulkarni, MJ. Paulines, MAT. Rubio, PA. Limbach, Z. Paris, JD. Alfonzo,
- 520 9_
- $a Retrograde transport of tRNAs from the cytoplasm to the nucleus was first described in Saccharomyces cerevisiae and most recently in mammalian systems. Although the function of retrograde transport is not completely clear, it plays a role in the cellular response to changes in nutrient availability. Under low nutrient conditions tRNAs are sent from the cytoplasm to nucleus and presumably remain in storage there until nutrient levels improve. However, in S. cerevisiae tRNA retrograde transport is constitutive and occurs even when nutrient levels are adequate. Constitutive transport is important, at least, for the proper maturation of tRNAPhe, which undergoes cytoplasmic splicing, but requires the action of a nuclear modification enzyme that only acts on a spliced tRNA. A lingering question in retrograde tRNA transport is whether it is relegated to S. cerevisiae and multicellular eukaryotes or alternatively, is a pathway with deeper evolutionary roots. In the early branching eukaryote Trypanosoma brucei, tRNA splicing, like in yeast, occurs in the cytoplasm. In the present report, we have used a combination of cell fractionation and molecular approaches that show the presence of significant amounts of spliced tRNATyr in the nucleus of T. brucei. Notably, the modification enzyme tRNA-guanine transglycosylase (TGT) localizes to the nucleus and, as shown here, is not able to add queuosine (Q) to an intron-containing tRNA. We suggest that retrograde transport is partly the result of the differential intracellular localization of the splicing machinery (cytoplasmic) and a modification enzyme, TGT (nuclear). These findings expand the evolutionary distribution of retrograde transport mechanisms to include early diverging eukaryotes, while highlighting its importance for queuosine biosynthesis.
- 650 _2
- $a aktivní transport - buněčné jádro $7 D021581
- 650 _2
- $a buněčné jádro $x genetika $x metabolismus $7 D002467
- 650 _2
- $a cytoplazma $x genetika $x metabolismus $7 D003593
- 650 _2
- $a kinetika $7 D007700
- 650 _2
- $a konformace nukleové kyseliny $7 D009690
- 650 _2
- $a nukleosid Q $x metabolismus $7 D009704
- 650 _2
- $a pentosyltransferasy $x genetika $x metabolismus $7 D010430
- 650 _2
- $a sestřih RNA $7 D012326
- 650 _2
- $a transport RNA $7 D034443
- 650 _2
- $a RNA transferová Phe $x genetika $x metabolismus $7 D012360
- 650 _2
- $a RNA transferová Tyr $x genetika $x metabolismus $7 D012365
- 650 _2
- $a Saccharomyces cerevisiae $x genetika $x metabolismus $7 D012441
- 650 _2
- $a Trypanosoma brucei brucei $x genetika $x metabolismus $7 D014346
- 655 _2
- $a časopisecké články $7 D016428
- 655 _2
- $a Research Support, N.I.H., Extramural $7 D052061
- 655 _2
- $a práce podpořená grantem $7 D013485
- 655 _2
- $a Research Support, U.S. Gov't, Non-P.H.S. $7 D013486
- 700 1_
- $a Kulkarni, Sneha S $u d Institute of Parasitology, Biology Centre, South Bohemia, Czech Academy of Sciences and Faculty of Science, University of South Bohemia , České Budějovice , South Bohemia , Czech Republic.
- 700 1_
- $a Paulines, Mellie J $u e Department of Chemistry , Rieveschl Laboratories for Mass Spectrometry, University of Cincinnati , Cincinnati , Ohio , USA.
- 700 1_
- $a Rubio, Mary Anne T $u a Department of Microbiology , The Ohio State University , Columbus , Ohio , USA. c The Center for RNA Biology, The Ohio State University , Columbus , Ohio , USA.
- 700 1_
- $a Limbach, Patrick A $u e Department of Chemistry , Rieveschl Laboratories for Mass Spectrometry, University of Cincinnati , Cincinnati , Ohio , USA.
- 700 1_
- $a Paris, Zdeněk $u d Institute of Parasitology, Biology Centre, South Bohemia, Czech Academy of Sciences and Faculty of Science, University of South Bohemia , České Budějovice , South Bohemia , Czech Republic.
- 700 1_
- $a Alfonzo, Juan D $u a Department of Microbiology , The Ohio State University , Columbus , Ohio , USA. b The Ohio State Biochemistry Program , The Ohio State University , Columbus , Ohio , USA. c The Center for RNA Biology, The Ohio State University , Columbus , Ohio , USA.
- 773 0_
- $w MED00181077 $t RNA biology $x 1555-8584 $g Roč. 15, č. 4-5 (2018), s. 528-536
- 856 41
- $u https://pubmed.ncbi.nlm.nih.gov/28901827 $y Pubmed
- 910 __
- $a ABA008 $b sig $c sign $y a $z 0
- 990 __
- $a 20190107 $b ABA008
- 991 __
- $a 20190115120856 $b ABA008
- 999 __
- $a ok $b bmc $g 1364024 $s 1039312
- BAS __
- $a 3
- BAS __
- $a PreBMC
- BMC __
- $a 2018 $b 15 $c 4-5 $d 528-536 $e 20171103 $i 1555-8584 $m RNA biology $n RNA Biol $x MED00181077
- LZP __
- $a Pubmed-20190107