Kinetics of the dimerization of retroviral proteases: the "fireman's grip" and dimerization
Jazyk angličtina Země Spojené státy americké Médium print
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
14500875
PubMed Central
PMC2366921
DOI
10.1110/ps.03171903
Knihovny.cz E-zdroje
- MeSH
- algoritmy MeSH
- aspartátové endopeptidasy chemie genetika metabolismus MeSH
- bodová mutace genetika MeSH
- dimerizace MeSH
- fluorescenční barviva metabolismus MeSH
- HIV-proteasa chemie genetika metabolismus MeSH
- kinetika MeSH
- lidé MeSH
- molekulární modely MeSH
- rekombinantní proteiny chemie genetika metabolismus MeSH
- Retroviridae - proteiny chemie genetika metabolismus MeSH
- serin chemie genetika MeSH
- stabilita enzymů genetika MeSH
- substrátová specifita MeSH
- threonin chemie genetika MeSH
- vazebná místa genetika MeSH
- vodíková vazba MeSH
- vztahy mezi strukturou a aktivitou MeSH
- zvířata MeSH
- Check Tag
- lidé MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Názvy látek
- aspartátové endopeptidasy MeSH
- fluorescenční barviva MeSH
- HIV-proteasa MeSH
- protease p15 MeSH Prohlížeč
- rekombinantní proteiny MeSH
- Retroviridae - proteiny MeSH
- serin MeSH
- threonin MeSH
All retroviral proteases belong to the family of aspartic proteases. They are active as homodimers, each unit contributing one catalytic aspartate to the active site dyad. An important feature of all aspartic proteases is a conserved complex scaffold of hydrogen bonds supporting the active site, called the "fireman's grip," which involves the hydroxyl groups of two threonine (serine) residues in the active site Asp-Thr(Ser)-Gly triplets. It was shown previously that the fireman's grip is indispensable for the dimer stability of HIV protease. The retroviral proteases harboring Ser in their active site triplet are less active and, under natural conditions, are expressed in higher enzyme/substrate ratio than those having Asp-Thr-Gly triplet. To analyze whether this observation can be attributed to the different influence of Thr or Ser on dimerization, we prepared two pairs of the wild-type and mutant proteases from HIV and myeloblastosis-associated virus harboring either Ser or Thr in their Asp-Thr(Ser)-Gly triplet. The equilibrium dimerization constants differed by an order of magnitude within the relevant pairs. The proteases with Thr in their active site triplets were found to be approximately 10 times more thermodynamically stable. The dimer association contributes to this difference more than does the dissociation. We propose that the fireman's grip might be important in the initial phases of dimer formation to help properly orientate the two subunits of a retroviral protease. The methyl group of threonine might contribute significantly to fixing such an intermediate conformation.
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