Kinetoplastid guide RNA biogenesis is dependent on subunits of the mitochondrial RNA binding complex 1 and mitochondrial RNA polymerase
Jazyk angličtina Země Spojené státy americké Médium print-electronic
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
19228586
PubMed Central
PMC2661843
DOI
10.1261/rna.1411809
PII: rna.1411809
Knihovny.cz E-zdroje
- MeSH
- DEAD-box RNA-helikasy metabolismus MeSH
- DNA řízené RNA-polymerasy metabolismus MeSH
- guide RNA, Kinetoplastida genetika MeSH
- mitochondriální proteiny metabolismus MeSH
- NUDIX hydrolasy MeSH
- proteiny vázající RNA metabolismus MeSH
- protozoální proteiny metabolismus MeSH
- pyrofosfatasy metabolismus MeSH
- RNA mitochondriální MeSH
- RNA protozoální genetika MeSH
- RNA genetika MeSH
- Trypanosoma brucei brucei genetika růst a vývoj MeSH
- zvířata MeSH
- Check Tag
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Názvy látek
- DEAD-box RNA-helikasy MeSH
- DNA řízené RNA-polymerasy MeSH
- guide RNA, Kinetoplastida MeSH
- mitochondriální proteiny MeSH
- proteiny vázající RNA MeSH
- protozoální proteiny MeSH
- pyrofosfatasy MeSH
- RNA mitochondriální MeSH
- RNA protozoální MeSH
- RNA MeSH
The mitochondrial RNA binding complex 1 (MRB1) is a recently discovered complex of proteins associated with the TbRGG1 and TbRGG2 proteins in Trypanosoma brucei. Based on the phenotype caused by down-regulation of these two proteins, it was proposed to play an unspecified role in RNA editing. RNAi silencing of three newly characterized protein subunits, guide RNA associated proteins (GAPs) 1 and 2 as well as a predicted DExD/H-box RNA helicase, show they are essential for cell growth in the procyclic stage. Furthermore, their down-regulation leads to inhibition of editing in only those mRNAs for which minicircle-encoded guide (g) RNAs are required. However, editing remains unaffected when the maxicircle-encoded cis-acting gRNA is employed. Interestingly, all three proteins are necessary for the expression of the minicircle-encoded gRNAs. Moreover, down-regulation of a fourth assayed putative MRB1 subunit, Nudix hydrolase, does not appear to destabilize gRNAs, and down-regulation of this protein has a general impact on the stability of maxicircle-encoded RNAs. GAP1 and 2 are also essential for the survival of the bloodstream stage, in which the gRNAs become eliminated upon depletion of either protein. Immunolocalization revealed that GAP1 and 2 are concentrated into discrete spots along the mitochondrion, usually localized in the proximity of the kinetoplast. Finally, we demonstrate that the same mtRNA polymerase known to transcribe the maxicircle mRNAs may also have a role in expression of the minicircle-encoded gRNAs.
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