Comparison of Miniaturized Raman Spectrometers for Discrimination of Carotenoids of Halophilic Microorganisms

. 2019 ; 10 () : 1155. [epub] 20190529

Status PubMed-not-MEDLINE Jazyk angličtina Země Švýcarsko Médium electronic-ecollection

Typ dokumentu časopisecké články

Perzistentní odkaz   https://www.medvik.cz/link/pmid31191483

We present a comparison of the performance of four miniature portable Raman spectrometers for the discrimination of carotenoids in samples of carotene-producing microorganisms. Two spectrometers using a green laser allowing to obtain Resonance Raman (or pre-Resonance Raman) signals, one instrument with a 785 nm laser, and a recently developed Portable Sequentially Shifted Excitation Raman spectrometer (PSSERS) were used for identifying major pigments of different halophilic (genera Halobacterium, Halorubrum, Haloarcula, Salinibacter, Ectothiorhodospira, Dunaliella) and non-halophilic microorganisms (Micrococcus luteus, Corynebacterium glutamicum). Using all the tested instruments including the PSSERS, strong carotenoids signals corresponding to the stretching vibrations in the polyene chain and in-plane rocking modes of the attached CH3 groups were found at the correct positions. Raman spectra of carotenoids can be obtained from different types of microbiological samples (wet pellets, lyophilized culture biomass and pigment extracts in organic solvents), and can be collected fast and without time-consuming procedures.

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Baranska M., Roman M., Dobrowolski J. C., Schulz H., Baranski R. (2013). Recent advances in Raman analysis of plants: alkaloids, carotenoids, and polyacetylenes. DOI

Bligh E. G., Dyer W. J. (1959). A rapid method for total lipid extraction and purification. PubMed DOI

Culka A., Osterrothová K., Hutchinson I., Ingley R., McHugh M., Oren A., et al. (2014). Detection of pigments of halophilic endoliths from gypsum: Raman portable instrument and European Space Agency’s prototype analysis. PubMed DOI PMC

de Oliveira V. E., Castro H. V., Edwards H. G. M., de Oliveira L. F. C. (2010). Carotenes and carotenoids in natural biological samples: a Raman spectroscopic analysis. DOI

de Oliveira V. E., Neves Miranda M. A. C., Soares M. C. S., Edwards H. G. M., de Oliveira L. F. C. (2015). Study of carotenoids in cyanobacteria by Raman spectroscopy. PubMed DOI

Edwards H. G. M., Garcia-Pichel F., Newton E. M., Wynn-Williams D. D. (2000). Vibrational Raman spectroscopic study of scytonemin, the UV-protective cyanobacterial pigment. PubMed DOI

Edwards H. G. M., Russell N. C., Wynn-Williams D. D. (1997). Fourier transform Raman spectroscopic and scanning electron microscopic study of cryptoendolithic lichens from Antarctica.

Fendrihan S., Musso M., Stan-Lotter H. (2009). Raman spectroscopy as a potential method for the detection of extremely halophilic archaea embedded in halite in terrestrial and possibly extraterrestrial samples. PubMed DOI PMC

Heraud P., Beardall J., McNaughton D., Wood B. R. (2007). PubMed DOI

Holder J. M., Wynn-Williams D. D., Perez F. R., Edwards H. G. M. (2000). Raman spectroscopy of pigments and oxalates DOI

Jehlička J., Culka A., Košek F. (2017). Obtaining Raman spectra of minerals and carbonaceous matter using a portable sequentially shifted excitation Raman spectrometer – a few examples. DOI

Jehlička J., Edwards H. G. M., Němec I., Oren A. (2015). Raman spectroscopic study of the PubMed DOI

Jehlička J., Edwards H. G. M., Osterrothová K., Novotná J., Nedbalová L., Kopecký J., et al. (2014a). Potential and limits of Raman spectroscopy for carotenoid detection in microorganisms: implications for astrobiology. PubMed DOI PMC

Jehlička J., Edwards H. G. M., Oren A. (2014b). Raman spectroscopy of microbial pigments. PubMed DOI PMC

Jehlička J., Němec I., Varnali T., Culka A., Svatoš A., Frank O., et al. (2016). The pink pigment prodigiosin: vibrational spectroscopy and DFT calculations. DOI

Jehlička J., Oren A. (2013). Raman spectroscopy in halophile research. PubMed DOI PMC

Jehlička J., Oren A., Edwards H. G. M. (2013). Bacterioruberin and salinixanthin carotenoids of extremely halophilic archaea and bacteria: a Raman spectroscopic study. PubMed DOI

Jorge-Villar S. E., Benning L. G., Edwards H. G. M. and AMASE Team. (2007). Raman and SEM analysis of a biocolonised hot spring travertine terrace in Svalbard, Norway. PubMed DOI PMC

Kumar B. N. V., Kampe B., Rösch P., Popp J. (2015). Characterization of carotenoids in soil bacteria and investigation of their photodegradation by UVA radiation via resonance Raman spectroscopy. PubMed DOI

Malherbe C., Hutchinson I. B., McHugh M., Ingley R., Jehlička J., Edwards H. G. M. (2017). Accurate differentiation of carotenoid pigments using flight representative Raman spectrometers. PubMed DOI

Marshall C. P., Carter E. A., Leuko S., Javaux E. J. (2006). Vibrational spectroscopy of extant and fossil microbes: relevance for the astrobiological exploration of Mars. DOI

Marshall C. P., Leuko S., Coyle C. M., Walter M. R., Burns B. P., Neilan B. A. (2007). Carotenoid analysis of halophilic archaea by resonance Raman spectroscopy. PubMed DOI

Merlin J. C. (1985). Resonance Raman spectroscopy of carotenoids and carotenoid - containing systems. DOI

Miralles I., Jorge-Villar S. E., Cantón Y., Domingo F. (2012). Using a mini-Raman spectrometer to monitor the adaptive strategies of extremophile colonizers in arid deserts: relationships between signal strength, adaptive strategies, solar radiation, and humidity. PubMed DOI

Oren A., Hirschberg J., Mann V., Jehlička J. (2018). Effects of nicotine on the biosynthesis of carotenoids in halophilic archaea (class PubMed DOI

Osterrothová K., Culka A., Němečková K., Kaftan D., Nedbalová L., Procházková L., et al. (2019). Analyzing carotenoids of snow algae by Raman microspectroscopy and high-performance liquid chromatography. PubMed DOI

Ota S., Morita A., Ohnuki S., Hirata A., Sekida S., Okuda K., et al. (2018). Carotenoid dynamics and lipid droplet containing astaxanthin in response to light in the green alga PubMed DOI PMC

Pfennig N., Lippert K. D. (1966). Über das Vitamin B DOI

Stoeckel S., Stanca A. S., Helbig J., Rösch P., Popp J. (2015). Raman spectroscopic monitoring of the growth of pigmented and non-pigmented mycobacteria. PubMed DOI

Storme J. Y., Golubic S., Wilmotte A., Kleinteich J., Velazquez D., Javaux E. J. (2015). Raman characterization of the UV-protective pigment gloeocapsin and its role in the survival of cyanobacteria. PubMed DOI

Tauber J. P., Matthaus C., Lenz C., Hoffmeister D., Popp J. (2018). Analysis of basidiomycete pigments in situ by Raman spectroscopy. PubMed DOI

Vandenabeele P., Edwards H. G. M., Jehlička J. (2014). The role of mobile instrumentation in novel applications of Raman spectroscopy: archaeometry, geosciences, and forensics. PubMed DOI

Venckus P., Paliulis S., Kostkevičiene J., Dementjev A. (2018). CARS microscopy of scytonemin in cyanobacteria DOI

Villar S. E. J., Edwards H. G. M., Seaward M. R. D. (2005). Raman spectroscopy of hot desert, high altitude epilithic lichens. PubMed DOI

Vítek P., Edwards H. G. M., Jehlička J., Ascaso C., De los Ríos A., Valea S., et al. (2010). Microbial colonization of halite from the hyper-arid Atacama Desert studied by Raman spectroscopy. PubMed DOI

Vítek P., Jehlička J., Edwards H. G., Hutchinson I., Ascaso C., Wierzchos J. (2012). The miniaturized Raman system and detection of traces of life in halite from the Atacama Desert: some considerations for the search for life signatures on Mars. PubMed DOI PMC

Withnall R., Chowdhry B. Z., Silver J., Edwards H. G. M., de Oliveira L. F. C. (2003). Raman spectra of carotenoids in natural products. PubMed DOI

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