A Study on the Prevalence and Subtype Diversity of the Intestinal Protist Blastocystis sp. in a Gut-Healthy Human Population in the Czech Republic
Jazyk angličtina Země Švýcarsko Médium electronic-ecollection
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
33123491
PubMed Central
PMC7573152
DOI
10.3389/fcimb.2020.544335
Knihovny.cz E-zdroje
- Klíčová slova
- Blastocystis, Czech Republic, demography, genetic diversity, prevalence, survey,
- MeSH
- Blastocystis * genetika MeSH
- blastocystóza * epidemiologie MeSH
- ekosystém MeSH
- feces MeSH
- lidé MeSH
- prevalence MeSH
- zvířata MeSH
- Check Tag
- lidé MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Geografické názvy
- Česká republika epidemiologie MeSH
- Evropa MeSH
UNLABELLED: Blastocystis sp. is a common intestinal protist colonizing the human intestine the prevalence of which varies across non-industrialized and industrialized countries. Its role in the human gut ecosystem remains unclear due to persisting gaps in knowledge of epidemiology and factors affecting gut colonization. Here, we aimed to expand the knowledge of the epidemiology of Blastocystis sp. in the gut-healthy humans in one of the industrialized European countries, including the distribution of its subtypes, the correlation between its occurrence and several factors such as lifestyle, contact with animals, age, and sex. A total of 288 stool samples were obtained from asymptomatic individuals over the entire age-range and 136 samples from animals with which the volunteers were in frequent contact. All samples were examined in parallel by PCR and xenic in vitro culture. Blastocystis sp. was detected in samples from both human and non-human hosts. In humans, the overall prevalence was 24% and eight subtypes were found; in animals, the prevalence was 10%, and only five subtypes were detected. A higher incidence of Blastocystis sp. was observed in individuals (i) traveling outside Europe, (ii) in frequent contact with livestock, and (iii) over 50 years of age. We found no effect on gender on Blastocystis sp. colonization. SUMMARY: This study provides data on the prevalence and diversity of the gut protist Blastocystis sp. and its subtypes in a gut-healthy human population with emphasis on several factors such as contact with animals, lifestyle, age, and gender.
Biology Center Institute of Parasitology The Czech Academy of Sciences České Budějovice Czechia
Department of Bacteria Parasites and Fungi Statens Serum Institut Copenhagen Denmark
Faculty of Science University of South Bohemia České Budějovice Czechia
Zobrazit více v PubMed
Abdulsalam A. M., Ithoi I., Al-Mekhlafi H. M., Khan A. H., Ahmed A., Surin J., et al. (2013). Prevalence, predictors and clinical significance of PubMed DOI PMC
Alexeieff A. (1911). Sur nature des formations dites kystes de
Alfellani M. A., Stensvold C. R., Vidal-Lapiedra A., Onuoha E. S. U., Fagbenro-Beyioku A. F., Clark C. G. (2013b). Variable geographic distribution of PubMed DOI
Alfellani M. A., Taner-Mulla D., Jacob A. S., Imeede C. A., Yoshikawa H., Stensvold C. R., et al. (2013a). Genetic diversity of PubMed DOI
Andersen L. O., Bonde I., Nielsen H. B., Stensvold C. R. (2015). A retrospective metagenomics approach to studying PubMed DOI
Andersen L. O., Karim A. B., Roager H. M., Vigsnaes L. K., Krogfelt K. A., Licht T.R., et al. (2016). Associations between common intestinal parasites and bacteria in humans as revealed by qPCR. Eur. J. Clin. Microbiol. Infect. Dis. 35, 1427–1431. 10.1007/s10096-016-2680-2 PubMed DOI
Angelici M. C., Nardis C., Scarpelli R., Ade P. (2018). PubMed
Audebert C., Even G., Cian A., Loywick A., Merlin S., Viscogliosi E., et al. (2016). Colonization with the enteric protozoa PubMed DOI PMC
Bart A., Wentink-Bonnema E. M., Gilis H., Verhaar N., Wassenaar C. J., van Vugt M., et al. (2013). Diagnosis and subtype analysis of PubMed DOI PMC
Chabé M., Lokmer A., Ségurel L. (2017). Gut protozoa: friends or foes of the human gut microbiota? Trends Parasitol. 33, 925–934. 10.1016/j.pt.2017.08.005 PubMed DOI
Cian A., El Safadi D., Osman M., Moriniere R., Gantois N., Benamrouz-Vanneste S., et al. (2017). Molecular epidemiology of PubMed DOI PMC
Clark C. G., Stensvold C. R. (2016). PubMed DOI
Clark C. G., van der Giezen M., Alfellani M. A., Stensvold C. R. (2013). Recent developments in PubMed DOI
David É. B., Guimarães S., De Oliveira A. P., Bittencourt G. N., Nardi A. R. M., Ribolla P. E. M., et al. (2015). Molecular characterization of intestinal protozoa in two poor communities in the State of São Paulo, Brazil. Parasit. Vectors 8:103. 10.1186/s13071-015-0714-8 PubMed DOI PMC
El Safadi D., Cian A., Nourrisson C., Pereira B., Morelle C., Bastien P., et al. (2016). Prevalence, risk factors for infection and subtype distribution of the intestinal parasite PubMed DOI PMC
El Safadi D., Gaayeb L., Meloni D., Cian A., Poirier P., Wawrzyniak I., et al. (2014). Children of senegal river basin show the highest prevalence of PubMed DOI PMC
Forsell J., Granlund M., Stensvold C. R., Clark G. C., Evengard B. (2012). Subtype analysis of PubMed DOI
Greige S., El Safadi D., Khaled S., Gantois N., Baydoun M., Chemaly M., et al. (2019). First report on the prevalence and subtype distribution of PubMed DOI
Greige S., Safadi D., El Bécu N., Gantois N., Pereira B., Chabé M., et al. (2018). Prevalence and subtype distribution of PubMed DOI PMC
Guindon S., Gascuel O. (2003). A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 52, 696–704. 10.1080/10635150390235520 PubMed DOI
Jalallou N., Iravani S., Rezaeian M., Alinaghizade A., Mirjalali H. (2017). Subtypes distribution and frequency of PubMed PMC
Jeremiah S., Parija S. (2013). PubMed DOI PMC
Jiménez P. A., Jaimes J. E., Ramírez J. D. (2019). A summary of PubMed DOI PMC
Katoh K., Kuma K. I., Toh H., Miyata T. (2005). MAFFT version 5: improvement in accuracy of multiple sequence alignment. Nucleic Acids Res. 33, 511–518. 10.1093/nar/gki198 PubMed DOI PMC
Koltas I. S., Eroglu F. (2016). Subtype analysis of PubMed DOI
Krogsgaard L. R., Andersen L., O'Brien Johannesen T. B., Engsbro A. L., Stensvold C. R., et al. (2018). Characteristics of the bacterial microbiome in association with common intestinal parasites in irritable bowel syndrome. Clin. Transl. Gastroenterol. 9:161. 10.1038/s41424-018-0027-2 PubMed DOI PMC
Krogsgaard L. R., Engsbro A. L., Stensvold C. R., Nielsen H. V., Bytzer P. (2015). The prevalence of intestinal parasites is not greater among individuals with irritable bowel syndrome: a population-based case-control study. Clin. Gastroenterol. Hepatol. 13, 507–513. 10.1016/j.cgh.2014.07.065 PubMed DOI
Lee H., Lee S. H., Seo M. G., Kim H. Y., Kim J. W., Lee Y. R., et al. (2018). Occurrence and genetic diversity of PubMed DOI
Leelayoova S., Siripattanapipong S., Thathaisong U., Naaglor T., Taamasri P., Piyaraj P., et al. (2018). Drinking water: a possible source of PubMed DOI
Leelayoova S., Taamasri P., Rangsin R., Naaglor T., Thathaisong U., Mungthin M. (2002). PubMed DOI
Lukeš J., Stensvold C. R., Jirku-Pomajbíková K., Wegener Parfrey L. (2015). Are human intestinal eukaryotes beneficial or commensals? PLoS Pathog. 11:e1005039. 10.1371/journal.ppat.1005039 PubMed DOI PMC
Maloney J. G., Lombard J. E., Urie N. J., Shivley C. B., Santin M. (2019). Zoonotic and genetically diverse subtypes of PubMed DOI
Mardani Kataki M., Tavalla M., Beiromvand M. (2019). Higher prevalence of PubMed DOI
Mohammad N. A., Al-Mekhlafi H. M., Moktar N., Anuar T. S. (2017). Prevalence and risk factors of PubMed DOI
Nieves-Ramirez M. E., Partida-Rodriguez O., Laforest-Lapointe L. A., Reynolds L. A., Brown E. M., Morien E., et al. (2018). Asymptomatic intestinal colonization with protist PubMed DOI PMC
Noël C., Dufernez F. (2005). Molecular phylogenies of PubMed DOI PMC
Nourrisson C., Scanzi J., Pereira B., Nkoudmongo C., Wawrzyniak I., Cian A., et al. (2014). PubMed DOI PMC
Oliveira-Arbex A. P., David É. B., Guimarães S. (2018). PubMed DOI
Pandey P. K., Verma P., Marathe N., Shetty S., Bavdekar A., Patole M. S., et al. (2015). Prevalence and subtype analysis of PubMed DOI
Parfrey L. W., Walters W. A., Lauber C. L., Clemente J. C., Berg-Lyons D., Teiling C., et al. (2014). Communities of microbial eukaryotes in the mammalian gut within the context of environmental eukaryotic diversity. Front. Microbiol. 5:298. 10.3389/fmicb.2014.00298 PubMed DOI PMC
Parkar U., Traub R. J., Vitali S., Elliot A., Levecke B., Robertson I., et al. (2010). Molecular characterization of PubMed DOI
Paulos S., Koster P. C., de Lucio A., Hernandez-de-Mingo M., Cardona G. A., Fernandez-Crespo J. C., et al. (2018). Occurrence and subtype distribution of PubMed DOI
Petersen A. M., Stensvold C. R., Mirsepasi H., Engberg J., Friis-Møller A., Porsbo L. J., et al. (2013). Active ulcerative colitis associated with low prevalence of PubMed DOI
Poirier P., Wawrzyniak I., Vivarès C. P., Delbac F., El Alaoui H. (2012). New insights into PubMed DOI PMC
Poulsen C. S., Efunshile A. M., Nelson J. A., Stensvold C. R. (2016). Epidemiological aspects of PubMed DOI PMC
Rambaut A. (2016). FigTree v1.4.3. Available online at:
Rambaut A., Drummond A., Xie D. (2018). Tracerv1.7. Available online at: http://beast.community/tracer (accessed March 10, 2020).
Ramírez J. D., Flórez C., Olivera M., Bernal M. C., Giraldo J. C. (2017). PubMed DOI PMC
Ramírez J. D., Sánchez A., Hernández C., Flórez C., Bernal M. C., Giraldo J. C., et al. (2016). Geographic distribution of human PubMed DOI
Ramírez J. D., Sánchez L. V., Bautista D. C., Corredor A. F., Flórez A. C., Stensvold C. R. (2014). PubMed DOI
Rezaei Riabi T., Haghighi A., Mirjalali H., Poirier P., Zali M. R., Delbac F., et al. (2018). Genetic diversity analysis of PubMed DOI
Roberts T., Stark D., Harkness J., Ellis J. (2013). Subtype distribution of PubMed DOI
Ronquist F., Teslenko M., Van der Mark P., Ayres D. L., Darling A., Höhna S., et al. (2012). Efficient bayesian phylogenetic inference and model choice across a large model space. Syst. Biol. 61, 539–542. 10.1093/sysbio/sys029 PubMed DOI PMC
Rossen N. G., Bart A., Verhaar N., van Nood E., Kootte R., de Groot P. F., et al. (2015). Low prevalence of PubMed DOI PMC
Rudzińska M., Kowalewska B., Waz P., Sikorska K., Szostakowska B. (2019). PubMed DOI
Scanlan P. D., Knight R., Song S. J., Ackermann G., Cotter P. D. (2016). Prevalence and genetic diversity of PubMed DOI
Scanlan P. D., Marchesi J. R. (2008). Micro-eukaryotic diversity of the human distal gut microbiota: qualitative assessment using culture-dependent and -independent analysis of faeces. ISME J. 2, 1183–1193. 10.1038/ismej.2008.76 PubMed DOI
Scanlan P. D., Ross R. P., Stanton C., Cotter P. D., Hill C. J., Ryan C. A. (2018). The intestinal protist PubMed DOI
Scanlan P. D., Stensvold C. R. (2013). PubMed DOI
Scanlan P. D., Stensvold C. R., Rajilić-Stojanović M., Heilig H. G. H. J., De Vos W. M., O'Toole P. W., et al. (2014). The microbial eukaryote PubMed DOI
Scicluna S. M., Tawari B., Clark C. G. (2006). DNA barcoding of PubMed DOI
Sekar U., Shanthi M. (2015). Recent insights into the genetic diversity, epidemiology and clinical relevance of
Seyer A., Karasartova D., Ruh E., Güreser A. S., Turgal E., Imir T., et al. (2017). Epidemiology and prevalence of PubMed DOI PMC
Silberman J. D., Sogin M. L., Leipe D. D., Clark C. G. (1996). Human parasite finds taxonomic home. Nature 4, 380–398. 10.1038/380398a0 PubMed DOI
Stensvold C. R., Alfellani M., Clark C. G. (2012). Levels of genetic diversity vary dramatically between PubMed DOI
Stensvold C. R., Arendrup M. C., Jespersgaard C., Molbak K., Nielsen H. V. (2007). Detecting PubMed DOI
Stensvold C. R., Clark C. G. (2016a). Current status of PubMed DOI
Stensvold C. R., Clark C. G. (2016b). Molecular identification and subtype analysis of PubMed DOI
Stensvold C. R., Clark C. G. (2020). Pre-empting pandora's box: PubMed DOI
Stensvold C. R., Lebbad M., Hansen A., Beser J., Belkessa S., Andersen L. O., et al. (2020b). Differentiation of PubMed DOI PMC
Stensvold C. R., Lewis H. C., Hammerum A. M., Porsbo L. J., Nielsen S. S., Olsen K. E., et al. (2009). PubMed DOI
Stensvold C. R., Tan K. S. W., Clark C. G. (2020a). PubMed DOI
Stensvold C. R., van der Giezen M. (2018). Associations between gut microbiota and common luminal intestinal parasites. Trends Parasitol. 34, 369–377. 10.1016/j.pt.2018.02.004 PubMed DOI
Suresh K., Smith H. (2004). Comparison of methods for detecting PubMed DOI
Tito R. Y., Chaffron S., Caenepeel C., Lima-Mendez G., Wang J., Vieira-Silva S., et al. (2019). Population-level analysis of PubMed DOI PMC
Trifinopoulos J., Nguyen L. T., von Haeseler A., Minh B. Q. (2016). W-IQ-TREE: a fastonline phylogenetic tool for maximum likelihood analysis. Nucleic Acids Res. 44, 232–235. 10.1093/nar/gkw256 PubMed DOI PMC
Udonsom R., Changbunjong T., Mori H., Popruk S., Mahittikorn A., Prasertbun R., et al. (2018). PubMed DOI
Valença Barbosa C., De Jesus Batista R., Pereira Igreja R., D'Avila Levy C. M., Werneck De Macedo H., et al. (2017). Distribution of PubMed DOI PMC
Valença-Barbosa C., Do Bomfim T. C. B., Teixeira B. R., Gentile R., Da Costa Neto S. F., Magalhães B. S. N., et al. (2019). Molecular epidemiology of PubMed DOI PMC
van Hattem J. M., Arcilla M. S., Schultsz C., Bootsma M. C., Verhaar N., Rebers S. P., et al. (2019). Carriage of PubMed DOI
Wang J., Gong B., Liu X., Zhao W., Bu T., Zhang W., et al. (2018). Distribution and genetic diversity of PubMed DOI PMC
Wang W., Cuttell L., Bielefeldt-Ohmann H., Inpankaew T., Owen H., Traub R. J. (2013). Diversity of PubMed DOI PMC
Wang W., Owen H., Traub R. J., Cuttell L., Inpankaew T., Bielefeldt-Ohmann H. (2014). Molecular epidemiology of PubMed DOI
Wawrzyniak I., Poirier P., Texier C., Delbac F., Viscogliosi E., Dionigia M., et al. (2013). Distribution and genetic diversity of PubMed DOI PMC
Yan Y., Su S., Ye J., Lai X., Lai R., Liao H., et al. (2007). PubMed DOI
Yoshikawa H., Koyama Y., Tsuchiya E., Takami K. (2016). PubMed DOI
Zaman V., Ng G. C., Suresh K., Yap E. H., Sing M. (1993). Isolation of DOI
Comprehensive Tools for Culturing Blastocystis: A Standardized Resource for Research and Diagnostics
Integrated overview of stramenopile ecology, taxonomy, and heterotrophic origin
Dryad
10.5061/dryad.np5hqbzqv