Genetic and environmental associations of nonspecific chromosomal aberrations
Language English Country Great Britain, England Media print
Document type Journal Article, Review
PubMed
38422374
PubMed Central
PMC11911008
DOI
10.1093/mutage/geae006
PII: 7616513
Knihovny.cz E-resources
- Keywords
- DNA repair, cancer, chromosomal damage, double-strand break, genetics,
- MeSH
- Genome-Wide Association Study MeSH
- Chromosome Aberrations * MeSH
- Gene-Environment Interaction * MeSH
- Humans MeSH
- Lymphocytes MeSH
- DNA Repair genetics MeSH
- DNA Damage MeSH
- Occupational Exposure adverse effects MeSH
- Environmental Exposure * adverse effects MeSH
- Check Tag
- Humans MeSH
- Publication type
- Journal Article MeSH
- Review MeSH
Nonspecific structural chromosomal aberrations (CAs) are found in around 1% of circulating lymphocytes from healthy individuals but the frequency may be higher after exposure to carcinogenic chemicals or radiation. CAs have been used in the monitoring of persons exposed to genotoxic agents and radiation. Previous studies on occupationally exposed individuals have shown associations between the frequency of CAs in peripheral blood lymphocytes and subsequent cancer risk. The cause for CA formation is believed to be unrepaired or insufficiently repaired DNA double-strand breaks or other DNA damage, and additionally telomere shortening. CAs include chromosome (CSAs) and chromatid type aberrations (CTAs). In the present review, we first describe the types of CAs, the conventional techniques used for their detection and some aspects of interpreting the results. We then focus on germline genetic variation in the frequency and type of CAs measured in a genome-wide association study in healthy individuals in relation to occupational and smoking-related exposure compared to nonexposed referents. The associations (at P < 10-5) on 1473 healthy individuals were broadly classified in candidate genes from functional pathways related to DNA damage response/repair, including PSMA1, UBR5, RRM2B, PMS2P4, STAG3L4, BOD1, COPRS, and FTO; another group included genes related to apoptosis, cell proliferation, angiogenesis, and tumorigenesis, COPB1, NR2C1, COPRS, RHOT1, ITGB3, SYK, and SEMA6A; a third small group mapped to genes KLF7, SEMA5A and ITGB3 which were related to autistic traits, known to manifest frequent CAs. Dedicated studies on 153 DNA repair genes showed associations for some 30 genes, the expression of which could be modified by the implicated variants. We finally point out that monitoring of CAs is so far the only method of assessing cancer risk in healthy human populations, and the use of the technology should be made more attractive by developing automated performance steps and incorporating artificial intelligence methods into the scoring.
Division of Cancer Epidemiology German Cancer Research Centre Heidelberg 69120 Germany
Division of Pediatric Neurooncology German Cancer Research Center Heidelberg Germany
Faculty of Medicine and Biomedical Center in Pilsen Charles University Pilsen 32300 Czech Republic
Hopp Children's Cancer Center Heidelberg Germany
Institute of Biology and Medical Genetics Charles University Albertov 4 Prague 12800 Czech Republic
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Commentary: Special Issue: Current Understanding of Colorectal and Pancreatic Cancers