Most cited article - PubMed ID 20839018
Structural analysis of natural killer cell receptor protein 1 (NKR-P1) extracellular domains suggests a conserved long loop region involved in ligand specificity
Working at the border between innate and adaptive immunity, natural killer (NK) cells play a key role in the immune system by protecting healthy cells and by eliminating malignantly transformed, stressed or virally infected cells. NK cell recognition of a target cell is mediated by a receptor "zipper" consisting of various activating and inhibitory receptors, including C-type lectin-like receptors. Among this major group of receptors, two of the largest rodent receptor families are the NKR-P1 and the Clr receptor families. Although these families have been shown to encode receptor-ligand pairs involved in MHC-independent self-nonself discrimination and are a target for immune evasion by tumour cells and viruses, structural mechanisms of their mutual recognition remain less well characterized. Therefore, we developed a non-viral eukaryotic expression system based on transient transfection of suspension-adapted human embryonic kidney 293 cells to produce soluble native disulphide dimers of NK cell C-type lectin-like receptor ectodomains. The expression system was optimized using green fluorescent protein and secreted alkaline phosphatase, easily quantifiable markers of recombinant protein production. We describe an application of this approach to the recombinant protein production and characterization of native rat NKR-P1B and Clr-11 proteins suitable for further structural and functional studies.
- MeSH
- HEK293 Cells MeSH
- Rats MeSH
- NK Cell Lectin-Like Receptor Subfamily B chemistry genetics metabolism MeSH
- Humans MeSH
- Protein Multimerization MeSH
- Calcitonin Receptor-Like Protein chemistry genetics metabolism MeSH
- Protein Domains MeSH
- Protein Engineering methods MeSH
- Recombinant Proteins chemistry genetics metabolism MeSH
- Animals MeSH
- Check Tag
- Rats MeSH
- Humans MeSH
- Animals MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
- Names of Substances
- Calcrl protein, rat MeSH Browser
- NK Cell Lectin-Like Receptor Subfamily B MeSH
- Calcitonin Receptor-Like Protein MeSH
- Recombinant Proteins MeSH
Human LLT1 is a C-type lectin-like ligand of NKR-P1 (CD161, gene KLRB1), a C-type lectin-like receptor of natural killer cells. Using X-ray diffraction, the first experimental structures of human LLT1 were determined. Four structures of LLT1 under various conditions were determined: monomeric, dimeric deglycosylated after the first N-acetylglucosamine unit in two forms and hexameric with homogeneous GlcNAc2Man5 glycosylation. The dimeric form follows the classical dimerization mode of human CD69. The monomeric form keeps the same fold with the exception of the position of an outer part of the long loop region. The hexamer of glycosylated LLT1 consists of three classical dimers. The hexameric packing may indicate a possible mode of interaction of C-type lectin-like proteins in the glycosylated form.
- Keywords
- C-type lectin-like ligand, LLT1,
- MeSH
- Glycosylation MeSH
- Protein Structure, Quaternary MeSH
- NK Cell Lectin-Like Receptor Subfamily B chemistry genetics metabolism MeSH
- Lectins, C-Type chemistry genetics metabolism MeSH
- Humans MeSH
- Protein Multimerization * MeSH
- Receptors, Cell Surface chemistry genetics metabolism MeSH
- Check Tag
- Humans MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
- Names of Substances
- CLEC2D protein, human MeSH Browser
- KLRB1 protein, human MeSH Browser
- NK Cell Lectin-Like Receptor Subfamily B MeSH
- Lectins, C-Type MeSH
- Receptors, Cell Surface MeSH
The C-type lectin-like receptors include the Nkrp1 protein family that regulates the activity of natural killer (NK) cells. Rat Nkrp1a was reported to bind monosaccharide moieties in a Ca2+-dependent manner in preference order of GalNac > GlcNAc >> Fuc >> Gal > Man. These findings established for rat Nkrp1a have been extrapolated to all additional Nkrp1 receptors and have been supported by numerous studies over the past two decades. However, since 1996 there has been controversy and another article showed lack of interactions with saccharides in 1999. Nevertheless, several high affinity saccharide ligands were synthesized in order to utilize their potential in antitumor therapy. Subsequently, protein ligands were introduced as specific binders for Nkrp1 proteins and three dimensional models of receptor/protein ligand interaction were derived from crystallographic data. Finally, for at least some members of the NK cell C-type lectin-like proteins, the "sweet story" was impaired by two reports in recent years. It has been shown that the rat Nkrp1a and CD69 do not bind saccharide ligands such as GlcNAc, GalNAc, chitotetraose and saccharide derivatives (GlcNAc-PAMAM) do not directly and specifically influence cytotoxic activity of NK cells as it was previously described.
- MeSH
- Killer Cells, Natural * chemistry immunology metabolism MeSH
- Antigens, CD * chemistry immunology metabolism MeSH
- Antigens, Differentiation, T-Lymphocyte * chemistry immunology metabolism MeSH
- Rats MeSH
- NK Cell Lectin-Like Receptor Subfamily B * chemistry immunology metabolism MeSH
- Lectins, C-Type * chemistry immunology metabolism MeSH
- Humans MeSH
- Oligosaccharides * chemistry immunology metabolism MeSH
- Protein Structure, Tertiary MeSH
- Animals MeSH
- Check Tag
- Rats MeSH
- Humans MeSH
- Male MeSH
- Animals MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
- Names of Substances
- Antigens, CD * MeSH
- CD69 antigen MeSH Browser
- Antigens, Differentiation, T-Lymphocyte * MeSH
- KLRB1 protein, human MeSH Browser
- NK Cell Lectin-Like Receptor Subfamily B * MeSH
- Lectins, C-Type * MeSH
- Oligosaccharides * MeSH
The structure of the H107R variant of the extracellular domain of the mouse natural killer cell receptor NKR-P1A has been determined by X-ray diffraction at 2.3 Å resolution from a merohedrally twinned crystal. Unlike the structure of the wild-type receptor in space group I4(1)22 with a single chain per asymmetric unit, the crystals of the variant belonged to space group I4(1) with a dimer in the asymmetric unit. Different degrees of merohedral twinning were detected in five data sets collected from different crystals. The mutation does not have a significant impact on the overall structure, but led to the binding of an additional phosphate ion at the interface of the molecules.
- MeSH
- Extracellular Space chemistry MeSH
- Crystallography, X-Ray MeSH
- Protein Structure, Quaternary MeSH
- NK Cell Lectin-Like Receptor Subfamily B chemistry genetics MeSH
- Models, Molecular MeSH
- Mutation * MeSH
- Mice MeSH
- Protein Structure, Tertiary MeSH
- Animals MeSH
- Check Tag
- Mice MeSH
- Animals MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
- Names of Substances
- NK Cell Lectin-Like Receptor Subfamily B MeSH