Most cited article - PubMed ID 34437111
Include all fungi in biodiversity goals
Arbuscular mycorrhizal (AM) fungi are fundamental to planetary health, enhancing plant nutrient uptake, stabilizing soils, and supporting biodiversity. Due to their prevalence and ecological importance, AM fungi are critical to achieving the environmental targets within the United Nations (UN) Sustainability Development Goals (SDGs) framework, including SDG 15: Life on Land. Despite these fungi engaging in the most widespread and ancient plant-microbe symbiosis, many fundamental aspects of the biogeography of AM fungi remain poorly resolved. This limits our ability to understand and document these fungal species' contributions to preserving terrestrial life on Earth. Using the largest global dataset of AM fungal eDNA sequences, we highlight that > 70% of ecoregions have no available data generated from soil using AM fungal specific metabarcoding. Drawing attention to these severe data gaps can optimize future sampling efforts in key habitats. Filling these gaps and developing a more complete picture on the biogeographic distributions of AM fungal species will help to clarify their contributions to environmental targets.
- Keywords
- Life on Land, Sustainable Development Goals, arbuscular mycorrhizal fungi, biodiversity, conservation, ecoregion,
- MeSH
- Biodiversity MeSH
- Ecosystem MeSH
- Phylogeography MeSH
- Mycorrhizae * genetics classification physiology MeSH
- United Nations MeSH
- Soil Microbiology MeSH
- Plants microbiology MeSH
- Symbiosis MeSH
- Sustainable Development * MeSH
- Publication type
- Journal Article MeSH
- Review MeSH
Fungal conservation is gaining momentum globally, but many challenges remain. To advance further, more data are needed on fungal diversity across space and time. Fundamental information regarding population sizes, trends, and geographic ranges is also critical to accurately assess the extinction risk of individual species. However, obtaining these data is particularly difficult for fungi due to their immense diversity, complex and problematic taxonomy, and cryptic nature. This paper explores how citizen science (CS) projects can be lever-aged to advance fungal conservation efforts. We present several examples of past and ongoing CS-based projects to record and monitor fungal diversity. These include projects that are part of broad collecting schemes, those that provide participants with targeted sampling methods, and those whereby participants collect environmental samples from which fungi can be obtained. We also examine challenges and solutions for how such projects can capture fungal diversity, estimate species absences, broaden participation, improve data curation, and translate resulting data into actionable conservation measures. Finally, we close the paper with a call for professional mycologists to engage with amateurs and local communities, presenting a framework to determine whether a given project would likely benefit from participation by citizen scientists.
- Keywords
- Red List, amateurs, extinction risk, fungal distribution, iNaturalist, mycology, online databases,
- Publication type
- Journal Article MeSH
Fungi are among the least known organisms on earth, with an estimated number of species between 1.5 and 10 million. This number is expected to be refined, especially with increasing knowledge about microfungi in undersampled habitats and increasing amounts of data derived from environmental DNA sequencing. A significant proportion of newly generated sequences fail to match with already named species, and thus represent what has been referred to as fungal "dark taxa". Due to the challenges associated with observing, identifying, and preserving sporophores, many macro- and microfungal species are only known from a single collection, specimen, isolate, and/or sequence-a singleton. Mycologists are consequently used to working with "rare" sequences and specimens. However, rarity and singleton phenomena lack consideration and valorization in fungal studies. In particular, the practice of publishing new fungal species names based on a single specimen remains a cause of debate. Here, we provide some elements of reflection on this issue in the light of the specificities of the fungal kingdom and global change context. If multiple independent sources of data support the existence of a new taxon, we encourage mycologists to proceed with formal description, irrespective of the number of specimens at hand. Although the description of singleton-based species may not be considered best practice, it does represent responsible science in the light of closing the Linnean biodiversity shortfall.
- Keywords
- Integrative taxonomy, Morphology, Rarity, Sequencing, Singletons, Species descriptions,
- Publication type
- Journal Article MeSH
Predicting whether a species is likely to go extinct (or not) is one of the fundamental objectives of conservation biology, and extinction risk classifications have become an essential tool for conservation policy, planning and research. This sort of prediction is feasible because the extinction processes follow a familiar pattern of population decline, range collapse and fragmentation, and, finally, extirpation of sub-populations through a combination of genetic, demographic and environmental stochasticity. Though less well understood and rarely quantified, the way in which science and society respond to population decline, extirpation and species extinction can also have a profound influence, either negative or positive, on whether a species goes extinct. For example, species that are highly sought after by collectors and hobbyists can become more desirable and valuable as they become rarer, leading to increased demand and greater incentives for illegal trade - known as the anthropogenic Allee effect. Conversely, species that are strongly linked to cultural identity are more likely to benefit from sustainable management, high public support for conservation actions and fund-raising, and, by extension, may be partially safeguarded from extinction. More generally, human responses to impending extinctions are extremely complex, are highly dependent on cultural and socioeconomic context, and have typically been far less studied than the ecological and genetic aspects of extinction. Here, we identify and discuss biocultural aspects of extinction and outline how recent advances in our ability to measure and monitor cultural trends with big data are, despite their intrinsic limitations and biases, providing new opportunities for incorporating biocultural factors into extinction risk assessment.
- Keywords
- anthropogenic Allee effect, biocultural, culturally important species, culturomics,
- Publication type
- Journal Article MeSH
- Review MeSH
- Keywords
- dark taxa, funga, fungal conservation, fungal diversity, integrative taxonomy approach, phenology,
- Publication type
- Editorial MeSH
Fungi are highly diverse organisms, which provide multiple ecosystem services. However, compared with charismatic animals and plants, the distribution patterns and conservation needs of fungi have been little explored. Here, we examined endemicity patterns, global change vulnerability and conservation priority areas for functional groups of soil fungi based on six global surveys using a high-resolution, long-read metabarcoding approach. We found that the endemicity of all fungi and most functional groups peaks in tropical habitats, including Amazonia, Yucatan, West-Central Africa, Sri Lanka, and New Caledonia, with a negligible island effect compared with plants and animals. We also found that fungi are predominantly vulnerable to drought, heat and land-cover change, particularly in dry tropical regions with high human population density. Fungal conservation areas of highest priority include herbaceous wetlands, tropical forests, and woodlands. We stress that more attention should be focused on the conservation of fungi, especially root symbiotic arbuscular mycorrhizal and ectomycorrhizal fungi in tropical regions as well as unicellular early-diverging groups and macrofungi in general. Given the low overlap between the endemicity of fungi and macroorganisms, but high conservation needs in both groups, detailed analyses on distribution and conservation requirements are warranted for other microorganisms and soil organisms.
- Keywords
- biodiversity, biogeography, climate change, conservation priorities, global change vulnerability, global maps, mycorrhizal fungi, pathogens, saprotrophs,
- MeSH
- Biodiversity MeSH
- Ecosystem MeSH
- Fungi MeSH
- Forests MeSH
- Humans MeSH
- Mycorrhizae * MeSH
- Soil * MeSH
- Soil Microbiology MeSH
- Plants MeSH
- Animals MeSH
- Check Tag
- Humans MeSH
- Animals MeSH
- Publication type
- Journal Article MeSH
- Names of Substances
- Soil * MeSH
Understanding and describing the diversity of living organisms is a great challenge. Fungi have for a long time been, and unfortunately still are, underestimated when it comes to taxonomic research. The foundations were laid by the first mycologists through field observations. These important fundamental works have been and remain vital reference works. Nevertheless, a non-negligible part of the studied funga escaped their attention. Thanks to modern developments in molecular techniques, the study of fungal diversity has been revolutionized in terms of tools and knowledge. Despite a number of disadvantages inherent to these techniques, traditional field-based inventory work has been increasingly superseded and neglected. This perspective aims to demonstrate the central importance of field-based research in fungal diversity studies, and encourages researchers not to be blinded by the sole use of molecular methods.
- Keywords
- fieldwork, fungal conservation, fungal diversity, genetics, monitoring, taxonomy,
- Publication type
- Journal Article MeSH