isolation by environment
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The therapeutic method of reverse isolation in patients using an aseptic environment in the Life Island or Laminar Air Flow Unit apparatus systems is described on the basis of data from the literature and the authors' experience. A historical summary of views on treatment in an aseptic environment is followed by a description of the method of work with the system of reverse isolation, including important technical, operational and other data. The main indications for treatment are given and the authors' experience with the reverse isolation of 36 patients suffering from blood diseases who were treated in this way over the past four years is evaluated. The experience gained confirms data from the literature that reverse isolation is unequivocally successful in reducing the number of infections in immunologically weakened persons. Other aspects have not yet been definitely assessed.
Many animal species show considerable intraspecific phenotypic variation. For species with broad distributions, this variation may result from heterogeneity in the strength and agents of selection across environments and could contribute to reproductive isolation among populations. Here, we examined interpopulation variation in a morphological trait related to chemical communication, femoral pore number (FP), using 3437 individuals from 55 Pyrenean populations of the common wall lizard (Podarcis muralis). Specifically, we tested the relative roles of genetic relatedness and gene flow, and adaptation to local conditions in generating this variation, with particular interest in the influence of climate and the socio-sexual environment (i.e., the intensity of sexual selection, estimated using sexual size dimorphism [SSD] and adult sex ratio as proxy measures). We found significant interpopulation variation and sexual dimorphism in FP, as well as high genomic differentiation among populations driven by both geographic and environmental distances. Specifically, FP differences across populations were best predicted by a combination of positive allometry and the local intensity of sexual selection, as determined by SSD, or local climatic conditions. Higher FP in more male-competitive environments, or with higher temperature and vegetation complexity, is consistent with adaptation to maintaining signaling efficacy of territorial scent marks. These results suggest that adaptation to local conditions contributes to interpopulation divergence in FP and thus environmental changes can potentially impact the fine-tuning of chemical communication mediating social and sexual behavior.
- Klíčová slova
- chemical communication, isolation by distance, isolation by environment, lacertid, phylogenetic mixed model, temperature,
- Publikační typ
- časopisecké články MeSH
Natural killer (NK) cells constitute the predominant innate lymphocyte subset that mediates the anti-viral and anti-tumor immune responses. NK cells use an array of innate receptors to sense their environment and to respond to infections, cellular stress and transformation. The resulting NK cell activation, including cytotoxicity and cytokine production, is a fundamental component of the early immune response. The most recent discoveries in NK cell biology have stimulated the translational research that has led to remarkable results for the treatment of human malignancies. Therefore, the rapid isolation of NK cells from the peripheral blood or tumor microenvironment and the subsequent assessment of cytolytic function are crucial to the study of their potency and NK cell-mediated immunosurveillance. Here, we provide protocols for NK cell isolation and the assessment of NK cell cytotoxicity using flow cytometry.
- Klíčová slova
- Cytotoxicity assay, Degranulation assay, Flow cytometry, NK-cell mediated cytotoxicity,
- MeSH
- aktivace lymfocytů MeSH
- buňky NK imunologie MeSH
- cytotoxicita imunologická * MeSH
- cytotoxické testy imunologické metody MeSH
- lidé MeSH
- průtoková cytometrie metody MeSH
- separace buněk metody MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
Mollusc communities of previously unexplored Bulgarian fens were studied in order to determine and generalise the patterns of species richness and composition along the mineral richness gradient. The aim was also to compare predictive values of the environment, vegetation and spatial structure. Altogether, 44 mollusc species were recorded at 40 treeless fen sites. Species richness varied from 0 to 18 species per site, and it was positively associated with the mineral gradient and negatively with altitude. However, the best predictor was obtained using plant species composition. All explanatory variables had higher effect on land snails than on the entire mollusc assemblage (including aquatic species). Species richness and abundance were significantly and positively correlated with the species composition turnover; the communities were highly nested, with poor sites having subsets of the fauna found in the richest. The main direction of mollusc species turnover was highly associated with that observed for vegetation, and the main gradient of plant species composition was able to explain nearly 20% of total variation in mollusc data. We found that spatial structure explained by far the highest proportion of independent variation, which reflected the high level of geographical isolation of Bulgarian fens and regional differences independent of any environmental variation. Our results demonstrate (1) the general role of mineral richness gradient for structuring mollusc communities in fens, (2) the pivotal indicator role of plant species composition in predicting species composition of mollusc communities, despite being trophically independent and (3) the effect of isolation and origins of the habitat on species composition: most species have wide geographical distributions within the habitat type, and geographical patterns within Bulgaria may have a stochastic element.
- MeSH
- biodiverzita MeSH
- ekosystém * MeSH
- měkkýši fyziologie MeSH
- životní prostředí * MeSH
- zvířata MeSH
- Check Tag
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Geografické názvy
- Bulharsko MeSH
Understanding the ecological, behavioural and evolutionary response of organisms to changing environments is of primary importance in a human-altered world. It is crucial to elucidate how human activities alter gene flow and what are the consequences for the genetic structure of a species. We studied two lineages of the Egyptian fruit bat (Rousettus aegyptiacus) throughout the contact zone between mesic and arid Ecozones in the Middle East to evaluate the species' response to the growing proportion of human-altered habitats in the desert. We integrated population genetics, morphometrics and movement ecology to analyse population structure, morphological variation and habitat use from GPS- or radio-tagged individuals from both desert and Mediterranean areas. We classified the spatial distribution and environmental stratification by describing physical-geographical conditions and land cover. We analysed this information to estimate patch occupancy and used an isolation-by-resistance approach to model gene flow patterns. Our results suggest that lineages from desert and Mediterranean habitats, despite their admixture, are isolated by environment and by adaptation supporting their classification as ecotypes. We found a positive effect of human-altered habitats on patch occupancy and habitat use of fruit bats by increasing the availability of roosting and foraging areas. While this commensalism promotes the distribution of fruit bats throughout the Middle East, gene flow between colonies has not been altered by human activities. This discrepancy between habitat use and gene flow patterns may, therefore, be explained by the breeding system of the species and modifications of natal dispersal patterns.
- Klíčová slova
- Pteropodidae, circuit theory, isolation by adaptation, isolation by environment, isolation by resistance, landscape genetics,
- MeSH
- Chiroptera genetika MeSH
- ekosystém * MeSH
- ekotyp * MeSH
- fenotyp MeSH
- fyziologická adaptace MeSH
- lidé MeSH
- lidské činnosti * MeSH
- mikrosatelitní repetice MeSH
- populační genetika * MeSH
- tok genů * MeSH
- zeměpis MeSH
- zvířata MeSH
- Check Tag
- lidé MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- Geografické názvy
- Egypt MeSH
The aim of this work was to compare production of endotoxin and to determine susceptibility to antibiotics in two groups of specimens-wild-type strains Ochrobactrum anthropi isolated from the environment and the strains isolated from patients with cystic fibrosis. The determination of the endotoxin produced by the test strains was carried on by using a limulus amebocyte lysate test (LAL test). Determination of ATB sensitivity was accomplished by means of a broth dilution method in a microtiter plate (MIC). No significant difference was found between the group of ochrobacters isolated from the environment and the group of ochrobacters isolated from cystic fibrosis patients. Antibiotic sensitivity testing has indicated that the resistance to tigecycline, trimethoprim/sulfamethoxazole, and gentamicin was slightly higher in strains isolated from cystic fibrosis patients in comparison with strains isolated from the environment. In general, most of the test strains were sensitive to most of the antibiotics tested. Significant resistance has been demonstrated for cefotaxime. Resistance was also found for gentamicin in strains number 4 and 7. The MIC was equal to the breakpoint for this antibiotic (8000 mg/L).
- MeSH
- antibakteriální látky farmakologie MeSH
- bakteriální léková rezistence MeSH
- cystická fibróza mikrobiologie MeSH
- dítě MeSH
- endotoxiny metabolismus MeSH
- gramnegativní bakteriální infekce mikrobiologie MeSH
- lidé MeSH
- Limulus test MeSH
- mikrobiální testy citlivosti MeSH
- mikrobiologie životního prostředí MeSH
- mladiství MeSH
- Ochrobactrum anthropi účinky léků izolace a purifikace metabolismus MeSH
- Check Tag
- dítě MeSH
- lidé MeSH
- mladiství MeSH
- Publikační typ
- časopisecké články MeSH
- srovnávací studie MeSH
- Názvy látek
- antibakteriální látky MeSH
- endotoxiny MeSH
Cyanobacteria are one of the most successful and oldest forms of life that are present on Earth. They are prokaryotic photoautotrophic microorganisms that colonize so diverse environments as soil, seawater, and freshwater, but also stones, plants, or extreme habitats such as snow and ice as well as hot springs. This diversity in the type of environment they live in requires a successful adaptation to completely different conditions. For this reason, cyanobacteria form a wide range of different secondary metabolites. In particular, the cyanobacteria living in both freshwater and sea produce many metabolites that have biological activity. In this review, we focus on metabolites called siderophores, which are low molecular weight chemical compounds specifically binding iron ions. They have a relatively low molecular weight and are produced by bacteria and also by fungi. The main role of siderophores is to obtain iron from the environment and to create a soluble complex available to microbial cells. Siderophores play an important role in microbial ecology; for example, in agriculture they support the growth of many plants and increase their production by increasing the availability of Fe in plants. The aim of this review is to demonstrate the modern use of physico-chemical methods for the detection of siderophores in cyanobacteria and the use of these methods for the detection and characterization of the siderophore-producing microorganisms. Using high-performance liquid chromatography-mass spectrometry (LC-MS), it is possible not only to discover new chemical structures but also to identify potential interactions between microorganisms. Based on tandem mass spectrometry (MS/MS) analyses, previous siderophore knowledge can be used to interpret MS/MS data to examine both known and new siderophores.
- MeSH
- fotochemické procesy MeSH
- molekulární struktura MeSH
- mořská voda mikrobiologie MeSH
- siderofory chemie izolace a purifikace metabolismus MeSH
- sinice metabolismus MeSH
- tandemová hmotnostní spektrometrie MeSH
- vysokoúčinná kapalinová chromatografie MeSH
- železo metabolismus MeSH
- Publikační typ
- časopisecké články MeSH
- přehledy MeSH
- Názvy látek
- siderofory MeSH
- železo MeSH
Some mycobacterial species (particularly Mycobacterium marinum) found in aquarium environments may cause chronic diseases in fish and cutaneous infections in humans, the so-called 'fish tank granuloma'. The presence and distribution of mycobacterial species in clinically healthy aquarium fish and their environment has not been adequately explored. The present study analysed the occurrence of mycobacteria in a decorative aquarium (Brno, South Moravia) and in five aquaria of a professional fish breeder (Bohumin, North Moravia). After Ziehl-Neelsen staining, acid-fast rods (AFR) were observed in six (14.3%) and mycobacteria were detected by culture in 18 (42.9%) of 42 tissue samples from 19 fish. Sixty-five samples of the aqueous environment from all six aquaria were examined; AFR were found in 16 (24.6%) and mycobacteria were detected by culture in 49 (75.4%) samples. Forty-one (70.7%) of 58 selected mycobacterial isolates were identified biochemically as follows: M. fortuitum, M. flavescens, M. chelonae, M. gordonae, M. terrae, M. triviale, M. diernhoferi, M. celatum, M. kansasii and M. intracellulare. The clinically important species for humans and fish, M. marinum, was not detected. Mycobacterium kansasii was isolated from one sample of the aquarium environment from North Moravia, which is a region of the Czech Republic with endemic incidence of M. kansasii in water. The incidence of other conditionally pathogenic mycobacterial species in healthy fish and in all investigated constituents of the aquarium environment including snails and crustaceans used for fish feeding, was quite high. Accordingly, mycobacterial species from aquarium environments may serve as a possible source of infection for both aquarium fish and immunodeficient fish handlers.
- MeSH
- atypické mykobakteriální infekce epidemiologie veterinární MeSH
- ekosystém MeSH
- incidence MeSH
- nemoci ryb epidemiologie mikrobiologie MeSH
- netuberkulózní mykobakterie klasifikace izolace a purifikace MeSH
- rybářství MeSH
- ryby MeSH
- životní prostředí MeSH
- zvířata MeSH
- Check Tag
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- srovnávací studie MeSH
Identifying the factors that influence spatial genetic structure among populations can provide insights into the evolution of invasive plants. In this study, we used the common reed (Phragmites australis), a grass native in Europe and invading North America, to examine the relative importance of geographic, environmental (represented by climate here), and human effects on population genetic structure and its changes during invasion. We collected samples of P. australis from both the invaded North American and native European ranges and used molecular markers to investigate the population genetic structure within and between ranges. We used path analysis to identify the contributions of each of the three factors-geographic, environmental, and human-related-to the formation of spatial genetic patterns. Genetic differentiation was observed between the introduced and native populations, and their genetic structure in the native and introduced ranges was different. There were strong effects of geography and environment on the genetic structure of populations in the native range, but the human-related factors manifested through colonization of anthropogenic habitats in the introduced range counteracted the effects of environment. The between-range genetic differences among populations were mainly explained by the heterogeneous environment between the ranges, with the coefficient 2.6 times higher for the environment than that explained by the geographic distance. Human activities were the primary contributor to the genetic structure of the introduced populations. The significant environmental divergence between ranges and the strong contribution of human activities to the genetic structure in the introduced range suggest that invasive populations of P. australis have evolved to adapt to a different climate and to human-made habitats in North America.
- Klíčová slova
- Phragmites, biological invasions, common reed, evolution, human activities, isolation by distance, isolation by environment, landscape genetics, spatial genetic structure,
- Publikační typ
- časopisecké články MeSH
The abundance of Na+, K+-ATPase in cartilage is controlled by the ionic composition of the extracellular environment of chondrocytes, and specifically depends on the local concentration of polyanionic matrix proteoglycans. In this study, it was found that the plasma membrane density of Na+, K+-ATPase in isolated chondrocytes is sensitive to both ionic and osmotic changes in the extracellular environment. The upregulation observed experimentally was similar in magnitude as measured by 3H-ouabain binding, which indicates that chondrocytes respond adaptively to both ionic and osmotic stimuli. The precise mechanism for this novel mode of Na+, K+-ATPase regulation has yet to be elucidated. Physiological perturbation of the ionic and osmotic environment of chondrocytes may alter intracellular Na+ concentration and this may be one of a number of stimuli responsible for alterations to the expression and plasma membrane abundance of Na+, K+-ATPase in the cells.
- MeSH
- aktivace enzymů účinky léků fyziologie MeSH
- chondrocyty cytologie enzymologie MeSH
- extracelulární prostor metabolismus MeSH
- hypertonické roztoky farmakologie MeSH
- isotonické roztoky farmakologie MeSH
- kloubní chrupavka cytologie enzymologie MeSH
- kultivační média farmakologie MeSH
- kultivované buňky MeSH
- osmotický tlak MeSH
- signální transdukce fyziologie MeSH
- skot MeSH
- sodíko-draslíková ATPasa metabolismus MeSH
- zvířata MeSH
- Check Tag
- skot MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Názvy látek
- hypertonické roztoky MeSH
- isotonické roztoky MeSH
- kultivační média MeSH
- sodíko-draslíková ATPasa MeSH
