Bacteriocin-encoding genes and ExPEC virulence determinants are associated in human fecal Escherichia coli strains

. 2014 Apr 28 ; 14 () : 109. [epub] 20140428

Jazyk angličtina Země Velká Británie, Anglie Médium electronic

Typ dokumentu časopisecké články, práce podpořená grantem

Perzistentní odkaz   https://www.medvik.cz/link/pmid24774171

BACKGROUND: A set of 1181 E. coli strains of human fecal origin isolated in the South Moravia region of the Czech Republic was collected during the years 2007-2010. Altogether, 17 virulence determinants and 31 bacteriocin-encoding genes were tested in each of them. RESULTS: The occurrence of bacteriocin-encoding genes was found to be positively correlated with the occurrence of E. coli virulence factors. Based on the presence of virulence factors and their combinations, E. coli strains were classified as non-pathogenic E. coli (n = 399), diarrhea-associated E. coli (n = 179) and ExPEC strains (n = 603). Non-pathogenic and diarrhea-associated E. coli strains had a low frequency of bacteriocinogeny (32.6% and 36.9%, respectively). ExPEC strains encoding S-fimbriae (sfa), P-fimbriae (pap) and having genes for aerobactin biosynthesis (aer, iucC), α-hemolysis (α-hly) and cytotoxic necrosis factor (cnf1) were often bacteriocinogenic (73.8%), had a high prevalence of bacteriocin multi-producers and showed a higher frequency of genes encoding microcins H47, M, V, B17 and colicins E1, Ia and S4. CONCLUSIONS: The occurrence of bacteriocin-encoding genes and ExPEC virulence determinants correlate positively in E. coli strains of human fecal origin. Bacteriocin synthesis appears to modulate the ability of E. coli strains to reside in the human intestine and/or the virulence of the corresponding strains.

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Eckburg PB, Bik EM, Bernstein CN, Purdom E, Dethlefsen L, Sargent M, Gill SR, Nelson KE, Relman DA. Diversity of the human intestinal microbial flora. Science. 2005;308:1635–1638. doi: 10.1126/science.1110591. PubMed DOI PMC

Sonnenborn U, Greinwald R. Beziehungen zwischen Wirtororganismus und Darmflora. Stuttgart - New York: Schattauer; 1991.

Guarner F, Malagelada J-R. Role of bacteria in experimental colitis. Best Pract Res Clin Gastroenterol. 2003;17:793–804. doi: 10.1016/S1521-6918(03)00068-4. PubMed DOI

Dobrindt U, Agerer F, Michaelis K, Janka A, Buchrieser C, Samuelson M, Svanborg C, Gottschalk G, Karch H, Hacker J. Analysis of genome plasticity in pathogenic and commensal Escherichia coli isolates by use of DNA arrays. J Bacteriol. 2003;185:1831–1840. doi: 10.1128/JB.185.6.1831-1840.2003. PubMed DOI PMC

Russo TA, Johnson JR. Proposal for a new inclusive designation for extraintestinal pathogenic isolates of Escherichia coli: ExPEC. J Infect Dis. 2000;181:1753–1754. doi: 10.1086/315418. PubMed DOI

Finlay BB, Falkow S. Common themes in microbial pathogenicity revisited. Microbiol Mol Biol Rev. 1997;61:136–169. PubMed PMC

Ochman H, Selander RK. Standard reference strains of Escherichia coli from natural populations. J Bacteriol. 1984;157:690–693. PubMed PMC

Nataro JP, Kaper JB. Diarrheagenic Escherichia coli. Clin Microbiol Rev. 1998;11:142–201. PubMed PMC

Girón JA, Jones T, Millán-Velasco F, Castro-Muñoz E, Zárate L, Fry J, Frankel G, Moseley SL, Baudry B, Kaper JB. Diffuse-adhering Escherichia coli (DAEC) as a putative cause of diarrhea in Mayan children in Mexico. J Infect Dis. 1991;163:507–513. doi: 10.1093/infdis/163.3.507. PubMed DOI

Nataro JP, Kaper JB, Robins-Browne R, Prado V, Vial P, Levine MM. Patterns of adherence of diarrheagenic Escherichia coli to HEp-2 cells. Pediatr Infect Dis J. 1987;6:829–831. doi: 10.1097/00006454-198709000-00008. PubMed DOI

Johnson JR, Murray AC, Gajewski A, Sullivan M, Snippes P, Kuskowski MA, Smith KE. Isolation and molecular characterization of nalidixic acid-resistant extraintestinal pathogenic Escherichia coli from retail chicken products. Antimicrob Agents Chemother. 2003;47:2161–2168. doi: 10.1128/AAC.47.7.2161-2168.2003. PubMed DOI PMC

Braun V, Pilsl H, Gross P. Colicins: structures, modes of action, transfer through membranes, and evolution. Arch Microbiol. 1994;161:199–206. doi: 10.1007/BF00248693. PubMed DOI

Gillor O, Nigro LM, Riley MA. Genetically engineered bacteriocins and their potential as the next generation of antimicrobials. Curr Pharm Des. 2005;11:1067–1075. doi: 10.2174/1381612053381666. PubMed DOI

Moreno F, San Millán JL, Hernández-Chico C, Kolter R. Microcins. Biotechnology. 1995;28:307–321. PubMed

Šmarda J, Šmajs D. Colicins–exocellular lethal proteins of Escherichia coli. Folia Microbiol (Praha) 1998;43:563–582. doi: 10.1007/BF02816372. PubMed DOI

Šmajs D, Weinstock GM. Genetic organization of plasmid ColJs, encoding colicin Js activity, immunity, and release genes. J Bacteriol. 2001;183:3949–3957. doi: 10.1128/JB.183.13.3949-3957.2001. PubMed DOI PMC

Šmajs D, Weinstock GM. The iron- and temperature-regulated cjrBC genes of Shigella and enteroinvasive Escherichia coli strains code for colicin Js uptake. J Bacteriol. 2001;183:3958–3966. doi: 10.1128/JB.183.13.3958-3966.2001. PubMed DOI PMC

Riley MA, Wertz JE. Bacteriocin diversity: ecological and evolutionary perspectives. Biochimie. 2002;84:357–364. doi: 10.1016/S0300-9084(02)01421-9. PubMed DOI

Patzer SI, Baquero MR, Bravo D, Moreno F, Hantke K. The colicin G, H and X determinants encode microcins M and H47, which might utilize the catecholate siderophore receptors FepA, Cir, Fiu and IroN. Microbiology (Reading, Engl) 2003;149(9):2557–2570. doi: 10.1099/mic.0.26396-0. PubMed DOI

Azpiroz MF, Poey ME, Laviña M. Microcins and urovirulence in Escherichia coli. Microb Pathog. 2009;47:274–280. doi: 10.1016/j.micpath.2009.09.003. PubMed DOI

Šmajs D, Micenková L, Šmarda J, Vrba M, Ševčíková A, Vališová Z, Woznicová V. Bacteriocin synthesis in uropathogenic and commensal Escherichia coli: colicin E1 is a potential virulence factor. BMC Microbiol. 2010;10:288. doi: 10.1186/1471-2180-10-288. PubMed DOI PMC

Budič M, Rijavec M, Petkovšek Z, Zgur-Bertok D. Escherichia coli bacteriocins: antimicrobial efficacy and prevalence among isolates from patients with bacteraemia. PLoS ONE. 2011;6:e28769. doi: 10.1371/journal.pone.0028769. PubMed DOI PMC

Petkovšek Z, Zgur-Bertok D, Starcic Erjavec M. Colicin insensitivity correlates with a higher prevalence of extraintestinal virulence factors among Escherichia coli isolates from skin and soft-tissue infections. J Med Microbiol. 2012;61(Pt 6):762–5. PubMed

Šmajs D, Karpathy SE, Šmarda J, Weinstock GM. Colicins produced by the Escherichia fergusonii strains closely resemble colicins encoded by Escherichia coli. FEMS Microbiol Lett. 2002;208:259–262. doi: 10.1111/j.1574-6968.2002.tb11091.x. PubMed DOI

Chumchalová J, Šmarda J. Human tumor cells are selectively inhibited by colicins. Folia Microbiol (Praha) 2003;48:111–115. doi: 10.1007/BF02931286. PubMed DOI

Gordon DM, O’Brien CL. Bacteriocin diversity and the frequency of multiple bacteriocin production in Escherichia coli. Microbiology (Reading, Engl) 2006;152(11):3239–3244. doi: 10.1099/mic.0.28690-0. PubMed DOI

Abraham S, Chapman TA, Zhang R, Chin J, Mabbett AN, Totsika M. Molecular characterization of Escherichia coli strains that cause symptomatic and asymptomatic urinary tract infections. J Clin Microbiol. 2012;50:1027–30. doi: 10.1128/JCM.06671-11. PubMed DOI PMC

Gordon DM, Stern SE, Collignon PJ. The influence of the age and sex of human hosts on the distribution of Escherichia coli ECOR groups and virulence traits. Microbiology. 2005;151:15–23. doi: 10.1099/mic.0.27425-0. PubMed DOI

Riley MA, Gordon DM. A survey of Col plasmids in natural isolates of Escherichia coli and an investigation into the stability of Col-plasmid lineages. J Gen Microbiol. 1992;138:1345–1352. doi: 10.1099/00221287-138-7-1345. PubMed DOI

Achtman M, Mercer A, Kusecek B, Pohl A, Heuzenroeder M, Aaronson W, Sutton A, Silver RP. Six widespread bacterial clones among Escherichia coli K1 isolates. Infect Immun. 1983;39:315–335. PubMed PMC

Šmajs D, Čejková D, Micenková L, Lima-Bittencourt CI, Chartone-Souza E, Šmarda J, Nascimento AMA. Human Escherichia coli strains of different geographical and time source: bacteriocin types and their gene sequences are population-specific. Environ Microbiol Rep. 2012;4:459–466. doi: 10.1111/j.1758-2229.2012.00365.x. PubMed DOI

Šmarda J, Obdržálek V. Incidence of colicinogenic strains among human Escherichia coli. J Basic Microbiol. 2001;41:367–74. doi: 10.1002/1521-4028(200112)41:6<367::AID-JOBM367>3.0.CO;2-X. PubMed DOI

Connell I, Agace W, Klemm P, Schembri M, Marild S, Svanborg C. Type 1 fimbrial expression enhances Escherichia coli virulence for the urinary tract. Proc Natl Acad Sci U S A. 1996;93:9827–9832. doi: 10.1073/pnas.93.18.9827. PubMed DOI PMC

Hagberg L, Jodal U, Korhonen TK, Lidin-Janson G, Lindberg U, Edén CS. Adhesion, hemagglutination, and virulence of Escherichia coli causing urinary tract infections. Infect Immun. 1981;31:564–570. PubMed PMC

Leffler H, Svanborg-Eden C. Glycolipid receptors for uropathogenic Escherichia coli on human erythrocytes and uroepithelial cells. Infect Immun. 1981;34:920–929. PubMed PMC

Edén CS, Freter R, Hagberg L, Hull R, Hull S, Leffler H, Schoolnik G. Inhibition of experimental ascending urinary tract infection by an epithelial cell-surface receptor analogue. Nature. 1982;298:560–562. doi: 10.1038/298560a0. PubMed DOI

Väisänen-Rhen V, Elo J, Väisänen E, Siitonen A, Orskov I, Orskov F, Svenson SB, Mäkelä PH, Korhonen TK. P-fimbriated clones among uropathogenic Escherichia coli strains. Infect Immun. 1984;43:149–155. PubMed PMC

Johnson JR. Virulence factors in Escherichia coli urinary tract infection. Clin Microbiol Rev. 1991;4:80–128. PubMed PMC

Bergsten G, Wullt B, Svanborg C. Escherichia coli, fimbriae, bacterial persistence and host response induction in the human urinary tract. Int J Med Microbiol. 2005;295:487–502. doi: 10.1016/j.ijmm.2005.07.008. PubMed DOI

Pilsl H, Šmajs D, Braun V. Characterization of colicin S4 and its receptor, OmpW, a minor protein of the Escherichia coli outer membrane. J Bacteriol. 1999;181:3578–3581. PubMed PMC

Wold AE, Caugant DA, Lidin-Janson G, de Man P, Svanborg C. Resident colonic Escherichia coli strains frequently display uropathogenic characteristics. J Infect Dis. 1992;165:46–52. doi: 10.1093/infdis/165.1.46. PubMed DOI

Nowrouzian F, Adlerberth I, Wold AE. P fimbriae, capsule and aerobactin characterize colonic resident Escherichia coli. Epidemiol Infect. 2001;126:11–18. PubMed PMC

Nowrouzian F, Wold AE, Adlerberth I. P fimbriae and aerobactin as intestinal colonization factors for Escherichia coli in Pakistani infants. Epidemiol Infect. 2001;126:19–23. PubMed PMC

Nowrouzian F, Hesselmar B, Saalman R, Strannegard I-L, Aberg N, Wold AE, Adlerberth I. Escherichia coli in infants’ intestinal microflora: colonization rate, strain turnover, and virulence gene carriage. Pediatr Res. 2003;54:8–14. doi: 10.1203/01.PDR.0000069843.20655.EE. PubMed DOI

Doye A, Mettouchi A, Bossis G, Clément R, Buisson-Touati C, Flatau G, Gagnoux L, Piechaczyk M, Boquet P, Lemichez E. CNF1 exploits the ubiquitin-proteasome machinery to restrict Rho GTPase activation for bacterial host cell invasion. Cell. 2002;111:553–564. doi: 10.1016/S0092-8674(02)01132-7. PubMed DOI

Wiles TJ, Kulesus RR, Mulvey MA. Origins and virulence mechanisms of uropathogenic Escherichia coli. Exp Mol Pathol. 2008;85:11–9. doi: 10.1016/j.yexmp.2008.03.007. PubMed DOI PMC

Gao Q, Wang X, Xu H, Xu Y, Ling J, Zhang D, Gao S, Liu X. Roles of iron acquisition systems in virulence of extraintestinal pathogenic Escherichia coli: salmochelin and aerobactin contribute more to virulence than heme in a chicken infection model. BMC Microbiol. 2012;12:143. doi: 10.1186/1471-2180-12-143. PubMed DOI PMC

Martínez JL, Herrero M, de Lorenzo V. The organization of intercistronic regions of the aerobactin operon of pColV-K30 may account for the differential expression of the iucABCD iutA genes. J Mol Biol. 1994;238:288–293. doi: 10.1006/jmbi.1994.1290. PubMed DOI

Schmidt H, Knop C, Franke S, Aleksic S, Heesemann J, Karch H. Development of PCR for screening of enteroaggregative Escherichia coli. J Clin Microbiol. 1995;33:701–705. PubMed PMC

Yamamoto S, Terai A, Yuri K, Kurazono H, Takeda Y, Yoshida O. Detection of urovirulence factors in Escherichia coli by multiplex polymerase chain reaction. FEMS Immunol Med Microbiol. 1995;12:85–90. doi: 10.1111/j.1574-695X.1995.tb00179.x. PubMed DOI

Kuhnert P, Hacker J, Mühldorfer I, Burnens AP, Nicolet J, Frey J. Detection system for Escherichia coli-specific virulence genes: absence of virulence determinants in B and C strains. Appl Environ Microbiol. 1997;63:703–709. PubMed PMC

Paton AW, Paton JC. Detection and characterization of Shiga toxigenic Escherichia coli by using multiplex PCR assays for stx1, stx2, eaeA, enterohemorrhagic E. coli hlyA, rfbO111, and rfbO157. J Clin Microbiol. 1998;36:598–602. PubMed PMC

Paciorek J. Virulence properties of Escherichia coli faecal strains isolated in Poland from healthy children and strains belonging to serogroups O18, O26, O44, O86, O126 and O127 isolated from children with diarrhoea. J Med Microbiol. 2002;51:548–556. PubMed

López-Saucedo C, Cerna JF, Villegas-Sepulveda N, Thompson R, Velazquez FR, Torres J, Tarr PI, Estrada-García T. Single multiplex polymerase chain reaction to detect diverse loci associated with diarrheagenic Escherichia coli. Emerging Infect Dis. 2003;9:127–131. doi: 10.3201/eid0901.010507. PubMed DOI PMC

Bírošová E, Siegfried L, Kmeťová M, Makara A, Ostró A, Gresová A, Urdzík P, Liptáková A, Molokácová M, Bártl R, Valanský L. Detection of virulence factors in alpha-haemolytic Escherichia coli strains isolated from various clinical materials. Clin Microbiol Infect. 2004;10:569–573. doi: 10.1111/j.1469-0691.2004.00922.x. PubMed DOI

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