Mono- and binuclear non-heme iron chemistry from a theoretical perspective
Jazyk angličtina Země Německo Médium print-electronic
Typ dokumentu časopisecké články, přehledy, práce podpořená grantem
PubMed
27229513
DOI
10.1007/s00775-016-1357-8
PII: 10.1007/s00775-016-1357-8
Knihovny.cz E-zdroje
- Klíčová slova
- Density functional theory, Dioxygen activation, Multireference methods, Non-heme iron, Reactivity,
- MeSH
- kvantová teorie * MeSH
- lidé MeSH
- nehemové proteiny obsahující železo chemie metabolismus MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- přehledy MeSH
- Názvy látek
- nehemové proteiny obsahující železo MeSH
In this minireview, we provide an account of the current state-of-the-art developments in the area of mono- and binuclear non-heme enzymes (NHFe and NHFe2) and the smaller NHFe(2) synthetic models, mostly from a theoretical and computational perspective. The sheer complexity, and at the same time the beauty, of the NHFe(2) world represents a challenge for experimental as well as theoretical methods. We emphasize that the concerted progress on both theoretical and experimental side is a conditio sine qua non for future understanding, exploration and utilization of the NHFe(2) systems. After briefly discussing the current challenges and advances in the computational methodology, we review the recent spectroscopic and computational studies of NHFe(2) enzymatic and inorganic systems and highlight the correlations between various experimental data (spectroscopic, kinetic, thermodynamic, electrochemical) and computations. Throughout, we attempt to keep in mind the most fascinating and attractive phenomenon in the NHFe(2) chemistry, which is the fact that despite the strong oxidative power of many reactive intermediates, the NHFe(2) enzymes perform catalysis with high selectivity. We conclude with our personal viewpoint and hope that further developments in quantum chemistry and especially in the field of multireference wave function methods are needed to have a solid theoretical basis for the NHFe(2) studies, mostly by providing benchmarking and calibration of the computationally efficient and easy-to-use DFT methods.
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Proc Natl Acad Sci U S A. 2009 Oct 20;106(42):17723-8 PubMed
J Am Chem Soc. 2011 Jan 19;133(2):176-9 PubMed
Nat Commun. 2014;5:3046 PubMed
J Am Chem Soc. 2007 Mar 28;129(12):3514-5 PubMed
Phys Chem Chem Phys. 2014 May 7;16(17):7927-38 PubMed
Chem Rev. 2014 Apr 9;114(7):3919-62 PubMed
Chemistry. 2013 Jan 7;19(2):771-81 PubMed
Inorg Chem. 2011 Jan 17;50(2):427-36 PubMed
Proc Natl Acad Sci U S A. 2012 Sep 4;109(36):14326-31 PubMed
Chem Sci. 2015 Nov 1;6(11):6280-6294 PubMed
J Am Chem Soc. 2010 Dec 22;132(50):17901-9 PubMed
J Chem Phys. 2008 Oct 21;129(15):154301 PubMed
Inorg Chem. 2014 Jul 7;53(13):6473-81 PubMed
Proc Natl Acad Sci U S A. 2006 Apr 18;103(16):6130-5 PubMed
Nat Chem. 2013 Aug;5(8):660-6 PubMed
J Chem Theory Comput. 2015 Nov 10;11(11):5120-31 PubMed
Angew Chem Int Ed Engl. 2016 Jan 18;55(3):1168-72 PubMed
J Chem Phys. 2014 Nov 7;141(17):174111 PubMed
J Am Chem Soc. 2016 Apr 20;138(15):5110-22 PubMed
J Phys Chem B. 2008 Nov 13;112(45):14099-102 PubMed
J Am Chem Soc. 2012 Feb 29;134(8):3903-11 PubMed
J Am Chem Soc. 2014 Nov 12;136(45):15977-91 PubMed
Proc Natl Acad Sci U S A. 2013 Nov 19;110(47):18874-9 PubMed
Inorg Chem. 2013 Aug 5;52(15):8551-63 PubMed
J Biol Inorg Chem. 2012 Aug;17(6):881-90 PubMed
Mol Biosyst. 2015 Mar;11(3):898-907 PubMed
Angew Chem Int Ed Engl. 2011 Mar 28;50(14):3215-8 PubMed
J Am Chem Soc. 2007 Jun 13;129(23):7427-38 PubMed
J Am Chem Soc. 2011 May 18;133(19):7384-97 PubMed
Chemistry. 2014 Jan 7;20(2):435-46 PubMed
Biochem Biophys Res Commun. 2005 Dec 9;338(1):175-90 PubMed
Biochemistry. 2011 Mar 22;50(11):1928-33 PubMed
Biochemistry. 2004 Sep 28;43(38):12331-42 PubMed
J Am Chem Soc. 2010 Sep 15;132(36):12639-47 PubMed
Chemistry. 2012 May 21;18(21):6555-67 PubMed
Biochemistry. 2012 Nov 27;51(47):9570-80 PubMed
J Chem Theory Comput. 2009 Jan 13;5(1):222-34 PubMed
Inorg Chem. 2015 Nov 2;54(21):10269-80 PubMed
Chemistry. 2003 Jan 3;9(1):106-15 PubMed
J Phys Chem B. 2014 Feb 20;118(7):1791-8 PubMed
Chem Sci. 2013 Jan;4(1):282-291 PubMed
J Am Chem Soc. 2010 Jun 30;132(25):8635-44 PubMed
J Chem Theory Comput. 2012 Mar 13;8(3):915-26 PubMed
Acc Chem Res. 2007 Jul;40(7):532-42 PubMed
J Mol Model. 2010 Nov;16(11):1673-7 PubMed
J Am Chem Soc. 2014 Oct 15;136(41):14472-85 PubMed
Chem Asian J. 2011 Feb 1;6(2):493-504 PubMed
Proc Natl Acad Sci U S A. 2006 Aug 29;103(35):12966-73 PubMed
Inorg Chem. 2015 Dec 7;54(23):11077-82 PubMed
J Am Chem Soc. 2013 Jul 24;135(29):10590-3 PubMed
J Phys Chem B. 2010 May 6;114(17):5878-85 PubMed
Chem Commun (Camb). 2014 Nov 25;50(91):14213-6 PubMed
J Phys Chem B. 2011 Sep 29;115(38):11278-85 PubMed
J Am Chem Soc. 2013 Jun 12;135(23):8585-93 PubMed
J Chem Phys. 2010 Jan 21;132(3):035101 PubMed
J Am Chem Soc. 2011 Aug 10;133(31):11876-9 PubMed
J Biol Inorg Chem. 2013 Mar;18(3):343-55 PubMed
Annu Rev Phys Chem. 2011;62:465-81 PubMed
J Am Chem Soc. 2013 Feb 27;135(8):3286-99 PubMed
J Am Chem Soc. 2013 Nov 13;135(45):17090-104 PubMed
J Am Chem Soc. 2013 Jul 3;135(26):9665-74 PubMed
J Chem Phys. 2010 Jan 14;132(2):024105 PubMed
J Chem Phys. 2010 Jan 14;132(2):024106 PubMed
Proc Natl Acad Sci U S A. 2008 Sep 9;105(36):13241-5 PubMed
J Chem Theory Comput. 2010 Sep 14;6(9):2896-909 PubMed
Theor Chem Acc. 2010 Mar;125(3-6):305-317 PubMed
Chemistry. 2003 Jul 21;9(14):3436-44 PubMed
J Am Chem Soc. 2001 Jul 4;123(26):6327-37 PubMed
J Am Chem Soc. 2012 Jul 18;134(28):11791-806 PubMed
J Am Chem Soc. 2015 Aug 26;137(33):10448-51 PubMed
J Biol Chem. 2007 Feb 2;282(5):3391-402 PubMed
Chem Rev. 2000 Jan 12;100(1):235-350 PubMed
Proc Natl Acad Sci U S A. 2011 Jan 25;108(4):1228-33 PubMed
Acc Chem Res. 2015 Sep 15;48(9):2612-21 PubMed
Angew Chem Int Ed Engl. 2009;48(20):3622-6 PubMed
Nature. 2011 Oct 26;478(7370):502-5 PubMed
J Biol Inorg Chem. 2011 Apr;16(4):553-65 PubMed
Inorg Chem. 2015 Aug 17;54(16):7828-39 PubMed
J Inorg Biochem. 2010 Feb;104(2):136-45 PubMed
J Chem Theory Comput. 2015 Jul 14;11(7):2984-93 PubMed
J Am Chem Soc. 2011 Mar 23;133(11):3869-82 PubMed
J Am Chem Soc. 2010 Jul 21;132(28):9715-27 PubMed
J Am Chem Soc. 2015 Jul 22;137(28):8860-71 PubMed
J Am Chem Soc. 2011 Apr 13;133(14):5594-601 PubMed
Inorganica Chim Acta. 2010 Oct 15;363(12):2762-2767 PubMed
J Chem Phys. 2013 Jul 28;139(4):044118 PubMed
Chem Rev. 2014 Apr 9;114(7):3601-58 PubMed
Acc Chem Res. 2013 Nov 19;46(11):2725-39 PubMed
Chem Commun (Camb). 2013 Jul 28;49(59):6650-2 PubMed
Biochemistry. 2010 Feb 16;49(6):1176-82 PubMed
Proc Natl Acad Sci U S A. 2010 Sep 28;107(39):16788-93 PubMed
J Am Chem Soc. 2007 Sep 19;129(37):11334-5 PubMed
Inorg Chem. 2015 Sep 8;54(17):8223-36 PubMed
J Am Chem Soc. 2008 Nov 5;130(44):14778-90 PubMed
Proc Natl Acad Sci U S A. 2013 Apr 16;110(16):6275-80 PubMed
Chemistry. 2014 Nov 24;20(48):15686-91 PubMed
Chem Sci. 2014 Jan 1;5(1):null PubMed
J Am Chem Soc. 2012 Jan 25;134(3):1536-42 PubMed
J Biol Inorg Chem. 2013 Jan;18(1):95-101 PubMed
Chem Rev. 2014 Apr 23;114(8):4229-317 PubMed
Dalton Trans. 2014 Jan 28;43(4):1505-8 PubMed
Science. 2013 Nov 22;342(6161):991-5 PubMed
J Chem Theory Comput. 2013 Nov 12;9(11):5004-5020 PubMed
Chem Soc Rev. 2010 Aug;39(8):2768-79 PubMed
J Am Chem Soc. 2015 Jun 3;137(21):6912-9 PubMed
J Am Chem Soc. 2011 Aug 10;133(31):11880-3 PubMed
Inorg Chem. 2013 Apr 15;52(8):4173-84 PubMed
J Am Chem Soc. 2004 Jul 7;126(26):8108-9 PubMed
Angew Chem Int Ed Engl. 2007;46(13):2291-4 PubMed
Biochemistry. 2005 Apr 26;44(16):6197-207 PubMed
J Am Chem Soc. 2015 Mar 18;137(10):3478-81 PubMed
Dalton Trans. 2012 Jan 21;41(3):995-1003 PubMed
Nat Chem. 2010 Sep;2(9):756-9 PubMed
Biochemistry. 2014 Sep 16;53(36):5759-70 PubMed
Chem Rev. 1996 Nov 7;96(7):2607-2624 PubMed
Science. 2003 Feb 14;299(5609):1037-9 PubMed
J Am Chem Soc. 2013 Nov 20;135(46):17573-84 PubMed
J Biol Inorg Chem. 2013 Oct;18(7):815-30 PubMed
J Am Chem Soc. 2013 Sep 25;135(38):14024-7 PubMed
Acc Chem Res. 2007 Jul;40(7):522-31 PubMed
Nature. 2013 Jul 18;499(7458):320-3 PubMed
J Chem Theory Comput. 2012 Feb 14;8(2):610-7 PubMed
J Biol Chem. 1998 May 22;273(21):13264-72 PubMed
Phys Rev Lett. 1992 Nov 9;69(19):2863-2866 PubMed
J Chem Phys. 2009 Aug 14;131(6):064103 PubMed
J Am Chem Soc. 2015 Jan 21;137(2):722-33 PubMed
J Am Chem Soc. 2006 Aug 9;128(31):10213-22 PubMed
J Am Chem Soc. 2012 Mar 21;134(11):5120-30 PubMed
J Phys Chem A. 2012 Jan 12;116(1):582-91 PubMed
J Phys Chem Lett. 2016 Jan 7;7(1):7-13 PubMed
J Phys Chem B. 2012 Oct 4;116(39):11837-44 PubMed
J Am Chem Soc. 2014 Jun 11;136(23):8157-60 PubMed
Biochemistry. 2013 Sep 3;52(35):6040-51 PubMed
J Am Chem Soc. 2009 Dec 2;131(47):17206-14 PubMed
J Biol Inorg Chem. 2004 Jun;9(4):439-52 PubMed
J Am Chem Soc. 2013 Jun 19;135(24):8838-41 PubMed
Biochemistry. 2007 Jul 10;46(27):8004-16 PubMed
J Phys Chem B. 2010 Jan 28;114(3):1518-28 PubMed
Acc Chem Res. 2015 Aug 18;48(8):2415-23 PubMed
J Am Chem Soc. 2010 Sep 8;132(35):12188-90 PubMed
Chem Commun (Camb). 2014 May 30;50(42):5572-5 PubMed
Chemistry. 2012 Sep 10;18(37):11747-60 PubMed
J Chem Phys. 2009 Mar 21;130(11):114108 PubMed
J Am Chem Soc. 2011 Oct 12;133(40):15979-91 PubMed
J Inorg Biochem. 2013 May;122:1-7 PubMed
J Am Chem Soc. 2011 Dec 21;133(50):20076-9 PubMed
Chem Sci. 2014 Mar 1;5(3):1204-1215 PubMed
Chem Rev. 2014 Apr 9;114(7):3466-94 PubMed
J Am Chem Soc. 2013 Mar 20;135(11):4235-49 PubMed
J Phys Chem A. 2006 Feb 9;110(5):1991-2004 PubMed
J Phys Chem B. 2015 Jul 2;119(26):8268-84 PubMed
Proc Natl Acad Sci U S A. 2006 Oct 3;103(40):14738-43 PubMed
Nat Chem. 2014 Oct;6(10):927-33 PubMed
Chemistry. 2011 Mar 21;17(13):3746-58 PubMed
J Am Chem Soc. 2014 Feb 19;136(7):2699-702 PubMed
J Phys Chem A. 2010 Dec 23;114(50):13234-43 PubMed
J Am Chem Soc. 2014 Jul 9;136(27):9524-7 PubMed
Can J Chem. 2014 Oct;92 (10 ):975-978 PubMed
J Am Chem Soc. 2016 Mar 2;138(8):2484-7 PubMed
J Am Chem Soc. 2011 Nov 16;133(45):18148-60 PubMed
Chemistry. 2013 May 17;19(21):6724-38 PubMed
J Am Chem Soc. 2015 Feb 25;137(7):2428-31 PubMed
Acc Chem Res. 2007 Jul;40(7):484-92 PubMed
J Chem Theory Comput. 2011 Oct 11;7(10):3232-3247 PubMed
Acc Chem Res. 2013 Feb 19;46(2):471-82 PubMed
Chem Sci. 2015 May 1;6(5):2909-2921 PubMed
Inorg Chem. 2009 Apr 20;48(8):3628-38 PubMed
J Biol Inorg Chem. 2012 Aug;17(6):841-52 PubMed
Inorg Chem. 2011 Jul 18;50(14):6637-48 PubMed
Proc Natl Acad Sci U S A. 2008 Jan 29;105(4):1146-51 PubMed
Inorg Chem. 2015 Aug 3;54(15):7152-64 PubMed
Inorg Chem. 2013 Aug 5;52(15):8909-18 PubMed
Biochemistry. 2011 Nov 29;50(47):10241-53 PubMed
Dalton Trans. 2014 Dec 21;43(47):17567-77 PubMed
Inorg Chem. 2000 Nov 13;39(23):5306-17 PubMed
Science. 2013 Nov 15;342(6160):825-9 PubMed
J Phys Chem A. 2012 Jun 7;116(22):5510-7 PubMed
Proc Natl Acad Sci U S A. 2007 Dec 4;104(49):19181-6 PubMed
J Chem Phys. 2013 May 28;138(20):204101 PubMed
Chemistry. 2015 Jun 15;21(25):9083-92 PubMed
J Chem Theory Comput. 2011 Feb 8;7(2):390-401 PubMed
Science. 2003 Feb 14;299(5609):1039-42 PubMed
Chemistry. 2015 Dec 21;21(52):18983-92 PubMed
Chem Commun (Camb). 2010 Jul 7;46(25):4511-3 PubMed
J Am Chem Soc. 2011 Jan 26;133(3):403-5 PubMed
Dalton Trans. 2013 Jun 14;42(22):7842-5 PubMed
J Chem Phys. 2008 May 28;128(20):204109 PubMed
Angew Chem Int Ed Engl. 2013 Jan 21;52(4):1294-8 PubMed
Nat Commun. 2014 Dec 16;5:5440 PubMed
Dalton Trans. 2011 Nov 14;40(42):11070-9 PubMed
Proc Natl Acad Sci U S A. 2010 Dec 28;107(52):22419-24 PubMed
J Am Chem Soc. 2010 Jan 27;132(3):1087-97 PubMed
Chem Rev. 2010 Dec 8;110(12):6939-60 PubMed
J Am Chem Soc. 2011 Apr 13;133(14 ):5236-9 PubMed
J Am Chem Soc. 2006 Mar 1;128(8):2630-4 PubMed
Chem Commun (Camb). 2009 Nov 28;(44):6828-30 PubMed
Inorg Chem. 2010 Jan 4;49(1):188-98 PubMed
Chemphyschem. 2014 Dec 15;15(18):4049-54 PubMed
J Am Chem Soc. 2011 Sep 21;133(37):14550-3 PubMed
J Chem Phys. 2011 Jul 28;135(4):044128 PubMed
Dalton Trans. 2012 May 21;41(19):5754-68 PubMed
J Am Chem Soc. 2007 Dec 26;129(51):15983-96 PubMed
Chemistry. 2015 Sep 7;21(37):12960-70 PubMed
J Am Chem Soc. 2010 Sep 22;132(37):12887-98 PubMed
Inorg Chem. 2012 Mar 5;51(5):2806-20 PubMed
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