Incomplete sclerotization and phylogeny: The phylogenetic classification of Plastocerus (Coleoptera: Elateroidea)
Jazyk angličtina Země Spojené státy americké Médium electronic-ecollection
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
29538419
PubMed Central
PMC5851614
DOI
10.1371/journal.pone.0194026
PII: PONE-D-17-04758
Knihovny.cz E-zdroje
- MeSH
- brouci genetika MeSH
- fylogeneze MeSH
- luminiscence MeSH
- mitochondriální DNA genetika MeSH
- mitochondrie genetika MeSH
- molekulární evoluce MeSH
- zvířata MeSH
- Check Tag
- mužské pohlaví MeSH
- ženské pohlaví MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Názvy látek
- mitochondriální DNA MeSH
The relationships of the monogeneric family Plastoceridae Crowson, 1972 (Coleoptera: Elateroidea) have remained contentious due to its modified morphology, incorrect information on incomplete metamorphosis of females and the absence of molecular data. We produced the sequences for P. angulosus (Germar, 1844) (the type-species of Plastocerus Schaum, 1852) and performed molecular phylogenetic analyses to estimate its position. The analyses of Elateroidea (186 spp.) and Elateridae (110 spp.) molecular datasets of two mitochondrial and two nuclear gene fragments repeatedly placed Plastocerus Schaum, 1852 in relationships with the elaterid genera Oxynopterus Hope, 1842 and Pectocera Hope, 1842. Alternative topologies were rejected by likelihood tests. Therefore, Plastoceridae Crowson, 1972 are down-ranked to the subfamily Plastocerinae in Elateridae Leach, 1815. We suggest that the morphology-based placement and high rank for some elateroid lineages were inferred from the presence of homoplasies which evolved due to incomplete sclerotization. Distantly related soft-bodied elateroids share freely movable and transverse coxae, a shortened prosternum, and a weakly sclerotized abdomen with free ventrites. Importantly, the apomorphic structures characteristic for their closest relatives, such as the prosternal process, mesoventral cavity, and intercoxal keel in the first abdominal ventrite are regularly absent. Consequently, morphology-based phylogenetic analyses suggest deeply rooted positions for lineages without expressed apomorphic character states. Molecular data represent an independent character system that is not affected by the convergent morphological evolution, and therefore molecular phylogenies can elucidate the relationships of incompletely sclerotized lineages.
Zobrazit více v PubMed
Hunt T, Bergsten J, Levkanicova Z, Papadopoulou A, St-John O, Wild R, et al. A comprehensive phylogeny of beetles reveals the evolutionary origins of a superradiation. Science. 2007;318: 1913–1916. doi: 10.1126/science.1146954 PubMed DOI
McKenna DD, Wild AL, Kanda K, Bellamy CL, Beutel RG, Caterino MS, et al. The beetle tree of life reveals that Coleoptera survived end-Permian mass extinction to diversify during the Cretaceous terrestrial revolution. Syst Entomol. 2015;40: 835–880.
Timmermans MJTN, Barton C, Haran J, Ahrens D, Ollikainen A, Culverwell L, et al. Family-Level Sampling of Mitochondrial Genomes in Coleoptera: Compositional Heterogeneity and Phylogenetics. Genome Biol Evol. 2016;8: 161–175. PubMed PMC
Lawrence JF, Ślipiński SA, Seago AE, Thayer MK, Newton AF, Marvaldi AE. Phylogeny of the Coleoptera based on morphological characters of adults and larvae. Annal Zool. 2011;61: 1–217.
Crowson RA. A review of the classification of Cantharoidea (Coleoptera), with definition of two new families Cneoglossidae and Omethidae. Revista de la Universidad de Madrid. 1972;21: 35–77.
Lawrence JF. Rhinorhipidae, a new beetle family from Australia, with comments on the phylogeny of the Elateriformia. Invertebrate Taxonomy. 1988;2: 1–53.
Branham MA, Wenzel JW. The evolution of photic behaviour and the evolution of sexual communication in fireflies (Coleoptera: Lampyridae). Cladistics. 2003;84: 565–586. PubMed
Kundrata R, Bocakova M, Bocak L. The comprehensive phylogeny of the superfamily Elateroidea (Coleoptera: Elateriformia). Mol Phylogenet Evol. 2014;76: 162–171. doi: 10.1016/j.ympev.2014.03.012 PubMed DOI
Bocak L, Barton C, Crampton-Platt A, Chesters D, Ahrens D, Vogler AP. Building the Coleoptera tree-of-life for >8000 species: composition of public DNA data and fit with Linnaean classification. Syst Entomol. 2014;39: 97–110.
Bocak L, Kundrata R, Andújar-Fernández C, Vogler AP. The discovery of Iberobaeniidae (Coleoptera: Elateroidea): a new family of beetles from Spain, with immatures detected by environmental DNA sequencing. Proc Biol Sci. 2016;283: 20152350 doi: 10.1098/rspb.2015.2350 PubMed DOI PMC
Jeannel R, Paulian R. Morphologie abdominale des coléoptères et systématique de l'ordre. Revue Française d'Entomologie. 1944;11: 65–110.
Crowson RA. The natural classification of the families of Coleoptera London: N. Lloyd; 1955.
Lawrence JF, Newton AF. Families and subfamilies of Coleoptera (with selected genera, notes, references and data on family-group names) In: Pakaluk J, Slipinski SA, editors. Biology, Phylogeny, and Classification of Coleoptera: Papers Celebrating the 80th Birthday of Roy A. Crowson. Warszawa: Muzeum i Instytut Zoologii PAN; 1995. pp. 779–1006.
Bocakova M, Bocak L, Hunt T, Teravainen M, Vogler AP. Molecular phylogenetics of Elateriformia (Coleoptera): evolution of bioluminescence and neoteny. Cladistics. 2007;23: 477–496.
Kundrata R, Bocak L. The phylogeny and limits of Elateridae (Insecta, Coleoptera): is there a common tendency of click beetles to soft-bodiedness and neoteny? Zool Scr. 2011;40: 364–378.
Leconte JL. Classification of the Coleoptera of North America. Part 1. Smithsonian Miscellaneous Collections. 1861;3: 1–208.
Schwarz O. Coleoptera. Fam. Plastoceridae. Genera Insectorum. 1907;50: 1–11.
Branham MA. Plastoceridae Crowson, 1972 In: Leschen RAB, Beutel RG, Lawrence JF, editors. Handbook of Zoology, Arthropoda: Insecta. Coleoptera, Beetles; Volume 2: Morphology and Systematics (Elateroidea, Bostrichiformia, Cucujiformia partim). Berlin and New York: Walter de Gruyter GmbH & Co. KG; 2010. pp. 103–104.
Leschen RAB., Beutel RG. Coleoptera, Beetles; Volume 1: Morphology and Systematics (Archostemata, Adephaga, Myxophaga, Polyphaga partim) 2nd edition In: Kristensen NP, Beutel RG, editors. Handbook of Zoology, Arthropoda: Insecta. Berlin/New York: Walter de Gruyter GmbH & Co. KG; 2016.
Katoh K, Misawa K, Kuma K, Miyata T. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res. 2002;30: 3059–3066. PubMed PMC
Nguyen LT, Schmidt HA, Von Haeseler A, Minh BQ. IQ-TREE: A fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol. 2015;32: 268–274. doi: 10.1093/molbev/msu300 PubMed DOI PMC
Kalyaanamoorthy S, Minh BQ, Wong TKF,von Haeseler A, Jermiin LS. ModelFinder: Fast model selection for accurate phylogenetic estimates. Nat Methods. 2017;14: 587–589. doi: 10.1038/nmeth.4285 PubMed DOI PMC
Minh BG, Nguyen MAT, von Haeseler A. Ultrafast Approximation for Phylogenetic Bootstrap. Mol Biol Evol. 2013;5: 1188–1195. PubMed PMC
Shimodaira H. An approximately unbiased test of phylogenetic tree selection. Syst Biol. 2002;3: 492–508. PubMed
Strimmer K, Rambaut A. Inferring confidence sets of possibly misspecified gene trees. Proc R Soc Lond Ser B. 2002;269: 137–142. PubMed PMC
Kishino H, Hasegawa M. Evaluation of the Maximum Likelihood Estimate of the Evolutionary Tree Topologies from DNA Sequence Data, and the Branching Order in Hominoidea. J Mol Evol. 1989;29: 170–179. PubMed
Lawrence JF, Nikitsky NB, Kirejtshuk AB. Phylogenetic position of Decliniidae (Coleoptera: Scirtoidea) and comments on the classification of Elateriformia (sensu lato) In Biology, Phylogeny, and Classification of Coleoptera: Papers Celebrating the 80th Birthday of Roy A. Crowson (ed. by Pakaluk J. and Slipinski S. A.). Warszawa: Muzeum i Instytut Zoologii PAN; 1995. pp. 373–410.
Bocak L, Bocakova M. Phylogeny and classification of the family Lycidae (Insecta: Coleoptera). Annal Zool. 2008;58: 695–720.
Bocak L, Brlik M. Revision of the family Omalisidae (Coleoptera, Elateroidea). Insect Syst Evol. 2008;39: 189–212.
Bocek M, Fancello L., Motyka M., Bocakova M. & Bocak L. The molecular phylogeny of Omalisidae (Coleoptera) defines the family limits and demonstrates low dispersal propensity and the ancient vicariance patterns. Syst. Entomol. 2018. (in press).
Motyka M, Masek M, Bocak L. Congruence between morphology and molecular phylogeny: the reclassification of Calochromini (Coleoptera: Lycidae) and their dispersal history. Zool J Linn Soc. 2017;1: 47–65.
McCracken KG, Harshman J, McClellan DA, Afton AD. Data set incongruence and correlated character evolution: an example of functional convergence in the hind-limb of stifftail diving ducks. Syst Biol. 1999;48: 683–714. PubMed
Hennig W. Phylogenetic Systematics Urbana: University of Illinois Press; 1966.
Wittmer W. Catalogue des Drilidae E. Oliv. (Coleoptera–Malacodermata). Revista de la Sociedad Entomológica Argentina. 1944;12: 203–221.
Semenov AP. Bulletin Entomologique, séance of 8 Dec. Russkoe Entomologicheskoe Obozrenie. 1909;8[1908]: 25.
Kiselyova T, McHugh JV. A phylogenetic study of Dermestidae (Coleoptera) based on larval morphology. Syst Entomol. 2006;31: 469–507.
Bocak L, Bocakova M, Hunt T, Vogler AP Multiple ancient origins of neoteny in Lycidae (Coleoptera): consequences for ecology and macroevolution. Proc R Soc Lond B Biol Sci. 2008;275: 2015–2023. PubMed PMC
Cicero JM. Ontophylogenetics of cantharoid larviforms (Coleoptera: Cantharoidea. Coleopt Bull. 1988;42: 105–151.
Cicero JM. Ontophylogenetic character analysis of Diaphanes (Coleoptera: Lampyridae) and extrapolation to the broader Coleoptera. Pan-Pac Entomol. 2008;84: 200–219.
South A, Stanger-Hall K, Jeng ML, Lewis SM. Correlated evolution of female neoteny and flightlessness with male spermatophore production in fireflies (Coleoptera: Lampyridae). Evolution. 2011;65: 1099–1113. doi: 10.1111/j.1558-5646.2010.01199.x PubMed DOI
Gould SJ. Ontogeny and Phylogeny Cambridge: Harvard University Press; 1977.
Truman JW, Riddiford LM. Endocrine insights into the evolution of metamorphosis in insects. Annu Rev Entomol. 2002;47: 467–500. doi: 10.1146/annurev.ento.47.091201.145230 PubMed DOI
An unusual elateroid lineage from mid-Cretaceous Burmese amber (Coleoptera: Elateroidea)
Cretophengodidae, a new Cretaceous beetle family, sheds light on the evolution of bioluminescence
Molecular Phylogeny, Diversity and Zoogeography of Net-Winged Beetles (Coleoptera: Lycidae)