LARP6C orchestrates posttranscriptional reprogramming of gene expression during hydration to promote pollen tube guidance
Jazyk angličtina Země Velká Británie, Anglie Médium print
Typ dokumentu časopisecké články, práce podpořená grantem
Grantová podpora
Wellcome Trust - United Kingdom
PubMed
34124761
PubMed Central
PMC8408461
DOI
10.1093/plcell/koab131
PII: 6276993
Knihovny.cz E-zdroje
- MeSH
- 5' nepřekládaná oblast MeSH
- Arabidopsis cytologie genetika růst a vývoj MeSH
- cytoplazmatická granula genetika metabolismus MeSH
- geneticky modifikované rostliny MeSH
- lipidy biosyntéza genetika MeSH
- messenger RNA genetika metabolismus MeSH
- proteiny huseníčku genetika metabolismus MeSH
- proteiny vázající RNA genetika metabolismus MeSH
- pylová láčka cytologie genetika růst a vývoj MeSH
- regulace genové exprese u rostlin MeSH
- RNA rostlin metabolismus MeSH
- tabák genetika MeSH
- vazba proteinů MeSH
- vazebná místa MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Názvy látek
- 5' nepřekládaná oblast MeSH
- AT3G19090 protein, Arabidopsis MeSH Prohlížeč
- lipidy MeSH
- messenger RNA MeSH
- proteiny huseníčku MeSH
- proteiny vázající RNA MeSH
- RNA rostlin MeSH
Increasing evidence suggests that posttranscriptional regulation is a key player in the transition between mature pollen and the progamic phase (from pollination to fertilization). Nonetheless, the actors in this messenger RNA (mRNA)-based gene expression reprogramming are poorly understood. We demonstrate that the evolutionarily conserved RNA-binding protein LARP6C is necessary for the transition from dry pollen to pollen tubes and the guided growth of pollen tubes towards the ovule in Arabidopsis thaliana. In dry pollen, LARP6C binds to transcripts encoding proteins that function in lipid synthesis and homeostasis, vesicular trafficking, and polarized cell growth. LARP6C also forms cytoplasmic granules that contain the poly(A) binding protein and possibly represent storage sites for translationally silent mRNAs. In pollen tubes, the loss of LARP6C negatively affects the quantities and distribution of storage lipids, as well as vesicular trafficking. In Nicotiana benthamiana leaf cells and in planta, analysis of reporter mRNAs designed from the LARP6C target MGD2 provided evidence that LARP6C can shift from a repressor to an activator of translation when the pollen grain enters the progamic phase. We propose that LARP6C orchestrates the timely posttranscriptional regulation of a subset of mRNAs in pollen during the transition from the quiescent to active state and along the progamic phase to promote male fertilization in plants.
Institut Universitaire de France 75231 Paris Cedex 5 France
Laboratoire Génome et Développement des Plantes UMR5096 CNRS 66860 Perpignan France
Randall Centre for Cell and Molecular Biophysics King's College London London SE1 1UL UK
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Ambrose JC, Cyr R (2007) The Kinesin ATK5 functions in early spindle assembly in Arabidopsis. Plant Cell 19: 226–236 PubMed PMC
Awai K, Maréchal E, Block MA, Brun D, Masuda T, Shimada H, Takamiya K, Ohta H, Joyard J (2001) Two types of MGDG synthase genes, found widely in both 16:3 and 18:3 plants, differentially mediate galactolipid syntheses in photosynthetic and nonphotosynthetic tissues in Arabidopsis thaliana. Proc Natl Acad Sci USA 98: 10960–10965 PubMed PMC
Belostotsky DA (2003) Unexpected complexity of poly(A)-binding protein gene families in flowering plants: three conserved lineages that are at least 200 million years old and possible auto- and cross-regulation. Genetics 163: 311–319 PubMed PMC
Belostotsky DA, Meagher RB (1996) A pollen-, ovule-, and early embryo-specific poly(A) binding protein from Arabidopsis complements essential functions in yeast. Plant Cell 8: 1261–1275 PubMed PMC
Botella C, Sautron E, Boudiere L, Michaud M, Dubots E, Yamaryo-Botté Y, Albrieux C, Marechal E, Block MA, Jouhet J (2016) ALA10, a phospholipid flippase, controls FAD2/FAD3 desaturation of phosphatidylcholine in the ER and affects chloroplast lipid composition in Arabidopsis thaliana. Plant Physiol 170: 1300–1314 PubMed PMC
Botté CY, Deligny M, Roccia A, Bonneau A-L, Saïdani N, Hardré H, Aci S, Yamaryo-Botté Y, Jouhet J, Dubots E, et al. (2011) Chemical inhibitors of monogalactosyldiacylglycerol synthases in Arabidopsis thaliana. Nat Chem Biol 7: 834–842 PubMed
Bousquet-Antonelli C, Deragon J-M (2009) A comprehensive analysis of the La-motif protein superfamily. RNA 15: 750–764 PubMed PMC
Brownfield L, Hafidh S, Borg M, Sidorova A, Mori T, Twell D (2009) A plant germline-specific integrator of sperm specification and cell cycle progression. PLoS Genet 5: e1000430. PubMed PMC
Buchan JR (2014) mRNP granules. Assembly, function, and connections with disease. RNA Biol 11: 1019–1030 PubMed PMC
Bullock SL (2011) Messengers, motors and mysteries: sorting of eukaryotic mRNAs by cytoskeletal transport. Biochem Soc Trans 39: 1161–1165 PubMed
Cai L, Fritz D, Stefanovic L, Stefanovic B (2010a) Binding of LARP6 to the conserved 5’ stem-loop regulates translation of mRNAs encoding type I collagen. J Mol Biol 395: 309–326 PubMed PMC
Cai L, Fritz D, Stefanovic L, Stefanovic B (2010b) Nonmuscle myosin-dependent synthesis of type I collagen. J Mol Biol 401: 564–578 PubMed PMC
Challa AA, Stefanovic B (2011) A novel role of vimentin filaments: binding and stabilization of collagen mRNAs. Mol Cell Biol 31: 3773–3789 PubMed PMC
Clough SJ, Bent AF (1998) Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J 16: 735–743 PubMed
Cvrčková F, Oulehlová D (2017) A new kymogram-based method reveals unexpected effects of marker protein expression and spatial anisotropy of cytoskeletal dynamics in plant cell cortex. Plant Methods 13: 19. PubMed PMC
Dermit M, Dodel M, Lee FCY, Azman MS, Schwenzer H, Jones JL, Blagden SP, Ule J, Mardakheh FK (2020) Subcellular mRNA localization regulates ribosome biogenesis in migrating cells. Dev Cell 55: 298–313.e10 PubMed PMC
Eliscovich C, Singer RH (2017) RNP transport in cell biology: the long and winding road. Curr Opin Cell Biol 45: 38–46 PubMed PMC
Feng Q-N, Liang X, Li S, Zhang Y (2018) The ADAPTOR PROTEIN-3 complex mediates pollen tube growth by coordinating vacuolar targeting and organization. Plant Physiol 177: 216–225 PubMed PMC
Grebnev G, Ntefidou M, Kost B (2017) Secretion and endocytosis in pollen tubes: models of tip growth in the spot light. Front Plant Sci 8: 154. PubMed PMC
Hafidh S, Potěšil D, Fíla J, Feciková J, Čapková V, Zdráhal Z, Honys D (2014) In search of ligands and receptors of the pollen tube: the missing link in pollen tube perception. Biochem Soc Trans 42: 388–394 PubMed
Hafidh S, Potěšil D, Müller K, Fíla J, Michailidis C, Herrmannová A, Feciková J, Ischebeck T, Valášek LS, Zdráhal Z, et al. (2018) Dynamics of the pollen sequestrome defined by subcellular coupled omics. Plant Physiol 178: 258–282 PubMed PMC
Hajdukiewicz P., Svab Z., Maliga P. (1994) The small, versatile pPZP family of Agrobacterium binary vectors for plant transformation. Plant Mol. Biol. 25: 989–94 PubMed
Hau HTA, Ogundele O, Hibbert AH, Monfries CAL, Exelby K, Wood NJ, Nevarez-Mejia J, Carbajal MA, Fleck RA, Dermit M, et al. (2020) Maternal Larp6 controls oocyte development, chorion formation and elevation. Development 147: dev187385. PubMed PMC
Hellman LM, Fried MG (2007) Electrophoretic mobility shift assay (EMSA) for detecting protein–nucleic acid interactions. Nat Protoc 2: 1849–1861 PubMed PMC
Higashiyama T, Takeuchi H (2015) The mechanism and key molecules involved in pollen tube guidance. Annu Rev Plant Biol 66: 393–413 PubMed
Honys D, Combe JP, Twell D, Capková V (2000) The translationally repressed pollen-specific ntp303 mRNA is stored in non-polysomal mRNPs during pollen maturation. Sex Plant Reprod 13: 135–144
Honys D, Twell D (2004) Transcriptome analysis of haploid male gametophyte development in Arabidopsis. Genome Biol 5: R85. PubMed PMC
Hubstenberger A, Courel M, Bénard M, Souquere S, Ernoult-Lange M, Chouaib R, Yi Z, Morlot JB, Munier A, Benard M, et al. (2017) P-body purification reveals the condensation of repressed mRNA regulons. Mol Cell 68: 144–157.e5 PubMed
Ischebeck T (2016) Lipids in pollen—they are different. Biochim Biophys Acta 1861: 1315–1328 PubMed
Ito T, Nagata N, Yoshiba Y, Ohme-Takagi M, Ma H, Shinozaki K (2007) Arabidopsis MALE STERILITY1 encodes a PHD-type transcription factor and regulates pollen and tapetum development. Plant Cell 19: 3549–3562 PubMed PMC
Johnson MA, Preuss D (2002) Plotting a course: multiple signals guide pollen tubes to their targets. Dev Cell 2: 273–281 PubMed
Kelly AA, van Erp H, Quettier A-L, Shaw E, Menard G, Kurup S, Eastmond PJ (2013) The SUGAR-DEPENDENT1 lipase limits triacylglycerol accumulation in vegetative tissues of Arabidopsis. Plant Physiol 162: 1282–1289 PubMed PMC
Khan BR, Adham AR, Zolman BK (2012) Peroxisomal acyl-CoA oxidase 4 activity differs between Arabidopsis accessions. Plant Mol Biol 78: 45–58 PubMed
Klepikova AV, Logacheva MD, Dmitriev SE, Penin AA (2015) RNA-seq analysis of an apical meristem time series reveals a critical point in Arabidopsis thaliana flower initiation. BMC Genomics 16: 466. PubMed PMC
Kulichová K, Kumar V, Steinbachová L, Klodová B, Timofejeva L, Juříček M, Honys D, Hafidh SS (2020) PRP8A and PRP8B spliceosome subunits act coordinately to control pollen tube attraction in Arabidopsis thaliana. Development 147: dev186742. PubMed
Lasierra P, Prat S (2018) Transient transactivation studies in Nicotiana benthamiana leaves. Methods Mol Biol 1794: 311–322 PubMed
Li S, van Os GMA, Ren S, Yu D, Ketelaar T, Emons AMC, Liu C-M (2010) Expression and functional analyses of EXO70 genes in Arabidopsis implicate their roles in regulating cell type-specific exocytosis. Plant Physiol 154: 1819–1830 PubMed PMC
Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2−ΔΔCT method. Methods 25: 402–408 PubMed
Manojlovic Z, Earwood R, Kato A, Perez D, Cabrera OA, Didier R, Megraw TL, Stefanovic B, Kato Y (2017) LA-related protein 6 controls ciliated cell differentiation. Cilia 6: 4. PubMed PMC
Maraia RJ, Mattijssen S, Cruz-Gallardo I, Conte MR (2017) The La and related RNA-binding proteins (LARPs): structures, functions, and evolving perspectives. Wiley Interdiscip Rev RNA 8: e1430 PubMed PMC
Martin K, Kopperud K, Chakrabarty R, Banerjee R, Brooks R, Goodin MM (2009) Transient expression in Nicotiana benthamiana fluorescent marker lines provides enhanced definition of protein localization, movement and interactions in planta. Plant J 59: 150–162 PubMed
Martino L, Pennell S, Kelly G, Busi B, Brown P, Atkinson RA, Salisbury NJ, Ooi ZH, See KW, Smerdon SJ, et al. (2015). Synergic interplay of the La motif, RRM1 and the interdomain linker of LARP6 in the recognition of collagen mRNA expands the RNA binding repertoire of the La module. Nucleic Acids Res 43: 645–660 PubMed PMC
McCue AD, Cresti M, Feijó JA, Slotkin RK (2011) Cytoplasmic connection of sperm cells to the pollen vegetative cell nucleus: potential roles of the male germ unit revisited. J Exp Bot 62: 1621–1631 PubMed
McElver J, Tzafrir I, Aux G, Rogers R, Ashby C, Smith K, Thomas C, Schetter A, Zhou Q, Cushman MA, et al. (2001). Insertional mutagenesis of genes required for seed development in Arabidopsis thaliana. Genetics 159: 1751–63. PubMed PMC
Merret R, Descombin J, Juan Y-T, Favory J-J, Carpentier M-C, Chaparro C, Charng Y-Y, Deragon J-M, Bousquet-Antonelli C (2013a). XRN4 and LARP1 are required for a heat-triggered mRNA decay pathway involved in plant acclimation and survival during thermal stress. Cell Rep 5:1279–1293 PubMed
Merret R, Martino L, Bousquet-Antonelli C, Fneich S, Descombin J, Billey É, Conte MR, Deragon J-M (2013b) The association of a La module with the PABP-interacting motif PAM2 is a recurrent evolutionary process that led to the neofunctionalization of la-related proteins. RNA 19: 36–50 PubMed PMC
Mochizuki S, Harada A, Inada S, Sugimoto-Shirasu K, Stacey N, Wada T, Ishiguro S, Okada K, Sakai T (2005) The Arabidopsis WAVY GROWTH 2 protein modulates root bending in response to environmental stimuli. Plant Cell 17: 537–547 PubMed PMC
Mori T, Igawa T, Tamiya G, Miyagishima S-Y, Berger F (2014) Gamete attachment requires GEX2 for successful fertilization in Arabidopsis. Curr Biol 24: 170–175 PubMed
Mori T, Kuroiwa H, Higashiyama T, Kuroiwa T (2006) GENERATIVE CELL SPECIFIC 1 is essential for angiosperm fertilization. Nat Cell Biol 8: 64–71 PubMed
Palanivelu R, Preuss D (2006) Distinct short-range ovule signals attract or repel Arabidopsis thaliana pollen tubes in vitro. BMC Plant Biol 6: 7. PubMed PMC
Pleskot R, Pejchar P, Bezvoda R, Lichtscheidl IK, Wolters-Arts M, Marc J, Zárský V, Potocký M (2012) Turnover of phosphatidic acid through distinct signaling pathways affects multiple aspects of pollen tube growth in tobacco. Front Plant Sci 3: 54. PubMed PMC
Qin Y, Leydon AR, Manziello A, Pandey R, Mount D, Denic S, Vasic B, Johnson MA, Palanivelu R (2009) Penetration of the stigma and style elicits a novel transcriptome in pollen tubes, pointing to genes critical for growth in a pistil. PLoS Genet 5: e1000621. PubMed PMC
Reyes FC, Buono RA, Roschzttardtz H, Di Rubbo S, Yeun LH, Russinova E, Otegui MS (2014) A novel endosomal sorting complex required for transport (ESCRT) component in Arabidopsis thaliana controls cell expansion and development. J Biol Chem 289: 4980–4988 PubMed PMC
Ruiz MT, Voinnet O, Baulcombe DC (1998) Initiation and maintenance of virus-induced gene silencing. Plant Cell 10: 937–946 PubMed PMC
Ryder SP, Recht MI, Williamson JR (2008) Quantitative analysis of protein-RNA interactions by gel mobility shift. Methods Mol Biol 488: 99–115 PubMed PMC
Samaj J, Müller J, Beck M, Böhm N, Menzel D (2006) Vesicular trafficking, cytoskeleton and signalling in root hairs and pollen tubes. Trends Plant Sci 11: 594–600 PubMed
Scarpin MR, Sigaut L, Temprana SG, Boccaccio GL, Pietrasanta LI, Muschietti JP (2017) Two Arabidopsis late pollen transcripts are detected in cytoplasmic granules. Plant Direct 1: e00012. PubMed PMC
Schulz-Raffelt M, Chochois V, Auroy P, Cuiné S, Billon E, Dauvillée D, Li-Beisson Y, Peltier G (2016) Hyper-accumulation of starch and oil in a Chlamydomonas mutant affected in a plant-specific DYRK kinase. Biotechnol Biofuels 9: 55. PubMed PMC
Stålberg K, Ståhl U, Stymne S, Ohlrogge J (2009) Characterization of two Arabidopsis thaliana acyltransferases with preference for lysophosphatidylethanolamine. BMC Plant Biol 9: 60. PubMed PMC
Synek L, Schlager N, Eliáš M, Quentin M, Hauser M-T, Žárský V (2006) AtEXO70A1, a member of a family of putative exocyst subunits specifically expanded in land plants, is important for polar growth and plant development. Plant J 48: 54–72 PubMed PMC
Synek L, Vukašinović N, Kulich I, Hála M, Aldorfová K, Fendrych M, Žárský V (2017) EXO70C2 is a key regulatory factor for optimal tip growth of pollen. Plant Physiol 174: 223–240 PubMed PMC
Takemoto K, Ebine K, Askani JC, Krüger F, Gonzalez ZA, Ito E, Goh T, Schumacher K, Nakano A, Ueda T (2018) Distinct sets of tethering complexes, SNARE complexes, and Rab GTPases mediate membrane fusion at the vacuole in Arabidopsis. Proc Natl Acad Sci USA 115: E2457–E2466 PubMed PMC
Tian L, Chou H-L, Fukuda M, Kumamaru T, Okita TW (2020) mRNA localization in plant cells. Plant Physiol 182: 97–109 PubMed PMC
Töpfer R, Matzeit V, Gronenborn B, Schell J, Steinbiss HH (1987) A set of plant expression vectors for transcriptional and translational fusions. Nucleic Acids Res 15: 5890. PubMed PMC
Tse YC, Lo SW, Hillmer S, Dupree P, Jiang L (2006) Dynamic response of prevacuolar compartments to brefeldin a in plant cells. Plant Physiol 142: 1442–1459 PubMed PMC
Twell D, Wing R, Yamaguchi J, McCormick S (1989) Isolation and expression of an anther-specific gene from tomato. Mol Gen Genet 217: 240–245 PubMed
van der Veen JH, Wirtz P (1968) EMS-induced genic male sterility in Arabidopsis thaliana: a model selection experiment. Euphytica 17: 371–377
Voigt B, Timmers ACJ, Samaj J, Müller J, Baluska F, Menzel D (2005) GFP-FABD2 fusion construct allows in vivo visualization of the dynamic actin cytoskeleton in all cells of Arabidopsis seedlings. Eur J Cell Biol 84: 595–608 PubMed
Vukašinović N, Žárský V (2016) Tethering complexes in the Arabidopsis endomembrane system. Front Cell Dev Biol 4: 46. PubMed PMC
Vukmirovic M, Manojlovic Z, Stefanovic B (2013) Serine-threonine kinase receptor-associated protein (STRAP) regulates translation of type I collagen mRNAs. Mol Cell Biol 33: 3893–3906 PubMed PMC
Weber C, Nover L, Fauth M (2008) Plant stress granules and mRNA processing bodies are distinct from heat stress granules. Plant J 56: 517–530 PubMed
Weng H, Kim C, Valavanis C, Wang Z, Schwartz LM (2009) Acheron, an novel LA antigen family member, binds to CASK and forms a complex with Id transcription factors. Cell Mol Biol Lett 14: 273–287 PubMed PMC
Woody ST, Austin-Phillips S, Amasino RM, Krysan PJ (2007) The WiscDsLox T-DNA collection: an arabidopsis community resource generated by using an improved high-throughput T-DNA sequencing pipeline. J Plant Res 120: 157–165 PubMed
Ylstra B, McCormick S (1999) Analysis of mRNA stabilities during pollen development and in BY2 cells. Plant J 20: 101–108 PubMed
Yu J, Qiu H, Liu X, Wang M, Gao Y, Chory J, Tao Y (2015) Characterization of tub4(P287L), a β-tubulin mutant, revealed new aspects of microtubule regulation in shade. J Integr Plant Biol 57: 757–769 PubMed PMC
Zhang M, Fan J, Taylor DC, Ohlrogge JB (2009) DGAT1 and PDAT1 acyltransferases have overlapping functions in Arabidopsis triacylglycerol biosynthesis and are essential for normal pollen and seed development. Plant Cell 21: 3885–3901 PubMed PMC
Zhang Y, Stefanovic B (2016) LARP6 meets collagen mRNA: specific regulation of type I collagen expression. Int J Mol Sci 17: 419. PubMed PMC
Zheng Y, Deng X, Qu A, Zhang M, Tao Y, Yang L, Liu Y, Xu J, Zhang S (2018) Regulation of pollen lipid body biogenesis by MAP kinases and downstream WRKY transcription factors in Arabidopsis. PLoS Genet 14: e1007880. PubMed PMC
Zhou J-J, Liang Y, Niu Q-K, Chen L-Q, Zhang X-Q, Ye D (2013) The Arabidopsis general transcription factor TFIIB1 (AtTFIIB1) is required for pollen tube growth and endosperm development. J Exp Bot 64: 2205–2218 PubMed PMC
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Editorial: Advances in Pollen Research: Biology, Biotechnology, and Plant Breeding Applications