Genetic and transcriptomic analysis of lentil seed imbibition and dormancy in relation to its domestication
Jazyk angličtina Země Spojené státy americké Médium print
Typ dokumentu časopisecké články
Grantová podpora
PrF-2023-001
Palacky University Grant Agency
PrF-2024-001
Palacky University Grant Agency
LUAUS25035
Ministry of Education, Youth and Sports of the Czech Republic
GC1903
Western Grains Research Foundation
LSP18-16302
Genome Canada
20200026
Government of Saskatchewan
PubMed
40164967
PubMed Central
PMC11958875
DOI
10.1002/tpg2.70021
Knihovny.cz E-zdroje
- MeSH
- čočka * genetika fyziologie MeSH
- domestikace * MeSH
- fenotyp MeSH
- klíčení genetika MeSH
- lokus kvantitativního znaku MeSH
- mapování chromozomů MeSH
- regulace genové exprese u rostlin MeSH
- semena rostlinná * genetika růst a vývoj fyziologie MeSH
- stanovení celkové genové exprese MeSH
- transkriptom * MeSH
- vegetační klid * genetika MeSH
- Publikační typ
- časopisecké články MeSH
Seed dormancy is an adaptation that delays germination to prevent the start of this process during unsuitable conditions. It is crucial in wild species but its loss was selected during crop domestication to ensure a fast and uniform germination. Water uptake, or imbibition, is the first step of germination. In the Fabaceae family, seeds have physical dormancy, in which seed coats are impermeable to water. We used an interspecific cross between an elite lentil line (Lens culinaris) and a wild lentil (L. orientalis) to investigate the genetic basis of imbibition capacity through quantitative trait locus (QTL) mapping and by using RNA from embryos and seed coats at different development stages, and phenotypic data of seed coat thickness (SCT) and proportion of imbibed seeds (PIS). Both characteristics were consistent throughout different years and locations, suggesting a hereditary component. QTL results suggest that they are each controlled by relatively few loci. Differentially expressed genes (DEGs) within the QTL were considered candidate genes. Two glycosyl-hydrolase genes (a β-glucosidase and a β-galactosidase), which degrade complex polysaccharides in the cell wall, were found among the candidate genes, and one of them had a positive correlation (β-glucosidase) between gene expression and imbibition capacity, and the other gene (β-galactosidase) presented a negative correlation between gene expression and SCT.
Department of Botany Palacký University Olomouc Czech Republic
Department of Mechanical Engineering University of Saskatchewan Saskatoon Saskatchewan Canada
Department of Plant Sciences University of Saskatchewan Saskatoon Saskatchewan Canada
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