Nejvíce citovaný článek - PubMed ID 18367544
Spliceosomal small nuclear ribonucleoprotein particles repeatedly cycle through Cajal bodies
The Cajal body (CB) is a conserved non-membrane nuclear structure where several steps of small nuclear RNP particle (snRNP) biogenesis take place. It has been proposed that CB formation follows a liquid-liquid phase separation model, but this hypothesis has never been rigorously tested. Here, we applied live-cell imaging to show that the key CB assembly factor coilin is mobile within the CB, and we revealed a diffusion barrier that limits the coilin exchange between CBs and the nucleoplasm. We generated single aa mutations and demonstrated that RNA-dependent coilin oligomerization and coilin interaction with snRNP are essential for CB formation and maintenance. We applied these data to formulate a mathematical model that links the movement of coilin within the nucleoplasm, CB, and across the boundary with its oligomerization and snRNP binding. Our results illustrate CB as a structure dynamically responding to snRNP assembly and recycling.
- MeSH
- Cajalova tělíska * metabolismus genetika MeSH
- HeLa buňky MeSH
- jaderné proteiny * metabolismus genetika MeSH
- lidé MeSH
- multimerizace proteinu MeSH
- mutace MeSH
- ribonukleoproteiny malé jaderné * metabolismus genetika MeSH
- spliceozomy * metabolismus genetika MeSH
- vazba proteinů MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- Názvy látek
- jaderné proteiny * MeSH
- p80-coilin MeSH Prohlížeč
- ribonukleoproteiny malé jaderné * MeSH
The nucleus of higher eukaryotes contains a number of structures that concentrate specific biomolecules and play distinct roles in nuclear metabolism. In recent years, the molecular mechanisms controlling their formation have been intensively studied. In this brief review, I focus on coilin and Cajal bodies. Coilin is a key scaffolding protein of Cajal bodies that is evolutionarily conserved in metazoans. Cajal bodies are thought to be one of the archetypal nuclear structures involved in the metabolism of several short non-coding nuclear RNAs. Yet surprisingly little is known about the structure and function of coilin, and a comprehensive model to explain the origin of Cajal bodies is also lacking. Here, I summarize recent results on Cajal bodies and coilin and discuss them in the context of the last three decades of research in this field.
- Klíčová slova
- Cajal bodies, coilin, snRNA, snRNP, snoRNA, telomerase RNA,
- MeSH
- buněčné jádro * MeSH
- Cajalova tělíska * MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- přehledy MeSH
U5 snRNP is a complex particle essential for RNA splicing. U5 snRNPs undergo intricate biogenesis that ensures that only a fully mature particle assembles into a splicing competent U4/U6•U5 tri-snRNP and enters the splicing reaction. During splicing, U5 snRNP is substantially rearranged and leaves as a U5/PRPF19 post-splicing particle, which requires re-generation before the next round of splicing. Here, we show that a previously uncharacterized protein TSSC4 is a component of U5 snRNP that promotes tri-snRNP formation. We provide evidence that TSSC4 associates with U5 snRNP chaperones, U5 snRNP and the U5/PRPF19 particle. Specifically, TSSC4 interacts with U5-specific proteins PRPF8, EFTUD2 and SNRNP200. We also identified TSSC4 domains critical for the interaction with U5 snRNP and the PRPF19 complex, as well as for TSSC4 function in tri-snRNP assembly. TSSC4 emerges as a specific chaperone that acts in U5 snRNP de novo biogenesis as well as post-splicing recycling.
- MeSH
- down regulace MeSH
- elongační faktory MeSH
- enzymy opravy DNA metabolismus MeSH
- HeLa buňky MeSH
- interakční proteinové domény a motivy MeSH
- jaderné proteiny metabolismus MeSH
- lidé MeSH
- malý jaderný ribonukleoprotein U5 chemie metabolismus MeSH
- nádorové supresorové proteiny chemie genetika metabolismus MeSH
- proteinové domény MeSH
- proteiny vázající RNA metabolismus MeSH
- rekombinantní fúzní proteiny MeSH
- ribonukleoproteiny malé jaderné chemie metabolismus MeSH
- sestřih RNA MeSH
- sestřihové faktory metabolismus MeSH
- spliceozomy metabolismus MeSH
- transkripční faktory MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Názvy látek
- EFTUD2 protein, human MeSH Prohlížeč
- elongační faktory MeSH
- enzymy opravy DNA MeSH
- jaderné proteiny MeSH
- malý jaderný ribonukleoprotein U5 MeSH
- nádorové supresorové proteiny MeSH
- proteiny vázající RNA MeSH
- PRPF19 protein, human MeSH Prohlížeč
- PRPF6 protein, human MeSH Prohlížeč
- PRPF8 protein, human MeSH Prohlížeč
- rekombinantní fúzní proteiny MeSH
- ribonukleoproteiny malé jaderné MeSH
- sestřihové faktory MeSH
- SNRNP200 protein, human MeSH Prohlížeč
- transkripční faktory MeSH
- TSSC4 protein, human MeSH Prohlížeč
Splicing is catalyzed by the spliceosome, a complex of five major small nuclear ribonucleoprotein particles (snRNPs). The pre-mRNA splicing factor PRPF8 is a crucial component of the U5 snRNP, and together with EFTUD2 and SNRNP200, it forms a central module of the spliceosome. Using quantitative proteomics, we identified assembly intermediates containing PRPF8, EFTUD2, and SNRNP200 in association with the HSP90/R2TP complex, its ZNHIT2 cofactor, and additional proteins. HSP90 and R2TP bind unassembled U5 proteins in the cytoplasm, stabilize them, and promote the formation of the U5 snRNP. We further found that PRPF8 mutants causing Retinitis pigmentosa assemble less efficiently with the U5 snRNP and bind more strongly to R2TP, with one mutant retained in the cytoplasm in an R2TP-dependent manner. We propose that the HSP90/R2TP chaperone system promotes the assembly of a key module of U5 snRNP while assuring the quality control of PRPF8. The proteomics data further reveal new interactions between R2TP and the tuberous sclerosis complex (TSC), pointing to a potential link between growth signals and the assembly of key cellular machines.
- MeSH
- elongační faktory genetika metabolismus MeSH
- HeLa buňky MeSH
- interakční proteinové domény a motivy MeSH
- lidé MeSH
- malý jaderný ribonukleoprotein U1 metabolismus MeSH
- malý jaderný ribonukleoprotein U4-U6 metabolismus MeSH
- malý jaderný ribonukleoprotein U5 genetika metabolismus MeSH
- messenger RNA genetika metabolismus MeSH
- multiproteinové komplexy MeSH
- mutace MeSH
- prekurzory RNA genetika metabolismus MeSH
- proteiny tepelného šoku HSP90 metabolismus MeSH
- proteiny vázající RNA genetika metabolismus MeSH
- proteiny vázající vápník metabolismus MeSH
- proteomika metody MeSH
- retinopathia pigmentosa genetika metabolismus MeSH
- RNA interference MeSH
- sestřih RNA * MeSH
- stabilita proteinů MeSH
- transfekce MeSH
- vazba proteinů MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- Názvy látek
- EFTUD2 protein, human MeSH Prohlížeč
- elongační faktory MeSH
- malý jaderný ribonukleoprotein U1 MeSH
- malý jaderný ribonukleoprotein U4-U6 MeSH
- malý jaderný ribonukleoprotein U5 MeSH
- messenger RNA MeSH
- multiproteinové komplexy MeSH
- prekurzory RNA MeSH
- proteiny tepelného šoku HSP90 MeSH
- proteiny vázající RNA MeSH
- proteiny vázající vápník MeSH
- PRPF8 protein, human MeSH Prohlížeč
- TESC protein, human MeSH Prohlížeč
Spliceosomal snRNPs are complex particles that proceed through a fascinating maturation pathway. Several steps of this pathway are closely linked to nuclear non-membrane structures called Cajal bodies. In this review, I summarize the last 20 y of research in this field. I primarily focus on snRNP biogenesis, specifically on the steps that involve Cajal bodies. I also evaluate the contribution of the Cajal body in snRNP quality control and discuss the role of snRNPs in Cajal body formation.
- MeSH
- Cajalova tělíska metabolismus MeSH
- genetická transkripce MeSH
- lidé MeSH
- posttranskripční úpravy RNA MeSH
- ribonukleoproteiny malé jaderné genetika metabolismus MeSH
- spliceozomy MeSH
- vazba proteinů MeSH
- zvířata MeSH
- Check Tag
- lidé MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- přehledy MeSH
- Názvy látek
- ribonukleoproteiny malé jaderné MeSH
The steroid hormone ecdysone coordinates insect growth and development, directing the major postembryonic transition of forms, metamorphosis. The steroid-deficient ecdysoneless1 (ecd1) strain of Drosophila melanogaster has long served to assess the impact of ecdysone on gene regulation, morphogenesis, or reproduction. However, ecd also exerts cell-autonomous effects independently of the hormone, and mammalian Ecd homologs have been implicated in cell cycle regulation and cancer. Why the Drosophila ecd1 mutants lack ecdysone has not been resolved. Here, we show that in Drosophila cells, Ecd directly interacts with core components of the U5 snRNP spliceosomal complex, including the conserved Prp8 protein. In accord with a function in pre-mRNA splicing, Ecd and Prp8 are cell-autonomously required for survival of proliferating cells within the larval imaginal discs. In the steroidogenic prothoracic gland, loss of Ecd or Prp8 prevents splicing of a large intron from CYP307A2/spookier (spok) pre-mRNA, thus eliminating this essential ecdysone-biosynthetic enzyme and blocking the entry to metamorphosis. Human Ecd (hEcd) can substitute for its missing fly ortholog. When expressed in the Ecd-deficient prothoracic gland, hEcd re-establishes spok pre-mRNA splicing and protein expression, restoring ecdysone synthesis and normal development. Our work identifies Ecd as a novel pre-mRNA splicing factor whose function has been conserved in its human counterpart. Whether the role of mammalian Ecd in cancer involves pre-mRNA splicing remains to be discovered.
- MeSH
- buněčný cyklus genetika MeSH
- Drosophila melanogaster genetika MeSH
- ekdyson genetika MeSH
- kultivované buňky MeSH
- larva genetika MeSH
- mutace genetika MeSH
- prekurzory RNA genetika MeSH
- proteiny Drosophily genetika MeSH
- ribonukleoproteiny malé jaderné genetika MeSH
- sestřih RNA genetika MeSH
- spliceozomy genetika MeSH
- steroidy metabolismus MeSH
- vývojová regulace genové exprese genetika MeSH
- zvířata MeSH
- Check Tag
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Názvy látek
- ecd protein, Drosophila MeSH Prohlížeč
- ekdyson MeSH
- prekurzory RNA MeSH
- proteiny Drosophily MeSH
- ribonukleoproteiny malé jaderné MeSH
- steroidy MeSH
The U4/U6·U5 tri-small nuclear ribonucleoprotein particle (tri-snRNP) is an essential pre-mRNA splicing factor, which is assembled in a stepwise manner before each round of splicing. It was previously shown that the tri-snRNP is formed in Cajal bodies (CBs), but little is known about the dynamics of this process. Here we created a mathematical model of tri-snRNP assembly in CBs and used it to fit kinetics of individual snRNPs monitored by fluorescence recovery after photobleaching. A global fitting of all kinetic data determined key reaction constants of tri-snRNP assembly. Our model predicts that the rates of di-snRNP and tri-snRNP assemblies are similar and that ∼230 tri-snRNPs are assembled in one CB per minute. Our analysis further indicates that tri-snRNP assembly is approximately 10-fold faster in CBs than in the surrounding nucleoplasm, which is fully consistent with the importance of CBs for snRNP formation in rapidly developing biological systems. Finally, the model predicted binding between SART3 and a CB component. We tested this prediction by Förster resonance energy transfer and revealed an interaction between SART3 and coilin in CBs.
- MeSH
- antigeny nádorové genetika metabolismus MeSH
- buněčné jádro genetika metabolismus MeSH
- Cajalova tělíska genetika metabolismus MeSH
- HeLa buňky MeSH
- jaderné proteiny metabolismus MeSH
- kinetika MeSH
- lidé MeSH
- malý jaderný ribonukleoprotein U4-U6 genetika metabolismus MeSH
- malý jaderný ribonukleoprotein U5 genetika metabolismus MeSH
- molekulární modely * MeSH
- nádorové buněčné linie MeSH
- prekurzory RNA genetika metabolismus MeSH
- proteiny vázající RNA genetika metabolismus MeSH
- ribonukleoproteiny malé jaderné genetika metabolismus MeSH
- RNA-helikasy genetika metabolismus MeSH
- sestřih RNA genetika MeSH
- spliceozomy genetika metabolismus MeSH
- vazba proteinů genetika MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Názvy látek
- antigeny nádorové MeSH
- DHX15 protein, human MeSH Prohlížeč
- jaderné proteiny MeSH
- malý jaderný ribonukleoprotein U4-U6 MeSH
- malý jaderný ribonukleoprotein U5 MeSH
- p80-coilin MeSH Prohlížeč
- prekurzory RNA MeSH
- proteiny vázající RNA MeSH
- ribonukleoproteiny malé jaderné MeSH
- RNA-helikasy MeSH
- SART3 protein, human MeSH Prohlížeč
- SNRNP200 protein, human MeSH Prohlížeč