Nejvíce citovaný článek - PubMed ID 33524089
Pickup and reactions of molecules on clusters relevant for atmospheric and interstellar processes
We investigate the electron attachment of acetyl chloride CH3COCl (AC) molecules and clusters in a molecular beam experiment and by extensive theoretical calculations. The main product of dissociative electron attachment (DEA) to the AC molecule is Cl-, which leads to the main (AC) n Cl- series in clusters. The weaker ion series identified in the cluster mass spectra correspond to (AC) n HCl2 - and hydrogen abstraction fragments [(AC) n -H]-, in full agreement with calculated energetics. We compare the present results for AC with previously studied trifluoroacetyl chloride CF3COCl (TFAC) and trichloroacetic acid CCl3COOH (TCA) molecules and clusters. DEA of the three isolated molecules results in the main fragment Cl-; however, the electron attachment to their clusters produces distinctly different cluster ions. This demonstrates that the outcomes of reactions of electrons with molecules in an environment cannot easily be predicted from the DEA of isolated molecules, and the solvent plays a key role in the process.
- Publikační typ
- časopisecké články MeSH
Sanazole is a hypoxic radiosensitizer for which the activation mechanism in cells has been suggested to involve initial reduction. Herein, electron attachment to sanazole under isolated conditions and upon microhydrations is investigated. Employing mass spectrometry supported by quantum chemical calculations, the anion formation mechanism and subsequent fragmentation pathways are examined. In the case of electron attachment to the isolated molecule, predominantly dissociative electron attachment is observed. The most prominent fragment anion, (NTR-yl)- at m/z 113, is suggested to be formed in an exothermic pathway through a single-bond dissociation, whereas other intense fragments require structural reorganization. The limited abundance of the parent anion under isolated conditions is altered upon microhydration conditions since in the latter situation only the (microhydrated) parent anion is observed. This result suggests that hydration closes and/or slows down the dissociation process and indicates that for sanazole, the initial mechanism of action in a reductive cell environment may be similar to that of well-studied nitroimidazole radiosensitizers.
- Klíčová slova
- electron attachment, electron‐induced dissociation, radiosensitizer, sanazol,
- MeSH
- elektrony * MeSH
- hmotnostní spektrometrie MeSH
- radiosenzibilizující látky * chemie MeSH
- triazoly * chemie MeSH
- Publikační typ
- časopisecké články MeSH
- Názvy látek
- radiosenzibilizující látky * MeSH
- triazoly * MeSH
The interest in the electron impact-induced ligand release from MeCpPtMe3 [trimethyl(methylcyclopentadienyl)platinum(IV)] is motivated by its widespread use as a precursor in focused electron and ion beam nanofabrication. By experimentally studying the electron impact dissociative ionization of MeCpPtMe3 under single-collision conditions, we have found that the removal of two methyl radicals is energetically more favorable than the removal of one radical and even energetically comparable to the nondissociative ionization of MeCpPtMe3. This observation is explained by the structural rearrangement of the MeCpPtMe3+ ion prior to dissociation, resulting in the removal of ethane instead of two methyl groups. This fragmentation pathway is computationally confirmed and studied by irradiation-driven molecular dynamics (IDMD) simulations. The formation of complex molecules in irradiation-induced molecular dissociation is a general phenomenon that can occur in various molecular systems. This study explains the puzzling results of previous experiments with MeCpPtMe3 molecules and highlights the use of the IDMD approach to describe radiation-induced chemical transformations in molecular systems.
- Publikační typ
- časopisecké články MeSH
This roadmap reviews the new, highly interdisciplinary research field studying the behavior of condensed matter systems exposed to radiation. The Review highlights several recent advances in the field and provides a roadmap for the development of the field over the next decade. Condensed matter systems exposed to radiation can be inorganic, organic, or biological, finite or infinite, composed of different molecular species or materials, exist in different phases, and operate under different thermodynamic conditions. Many of the key phenomena related to the behavior of irradiated systems are very similar and can be understood based on the same fundamental theoretical principles and computational approaches. The multiscale nature of such phenomena requires the quantitative description of the radiation-induced effects occurring at different spatial and temporal scales, ranging from the atomic to the macroscopic, and the interlinks between such descriptions. The multiscale nature of the effects and the similarity of their manifestation in systems of different origins necessarily bring together different disciplines, such as physics, chemistry, biology, materials science, nanoscience, and biomedical research, demonstrating the numerous interlinks and commonalities between them. This research field is highly relevant to many novel and emerging technologies and medical applications.
- Publikační typ
- časopisecké články MeSH
- přehledy MeSH
We probe the separation of ligands from iron tetracarbonyl methyl acrylate (Fe(CO)4(C4H6O2) or Fe(CO)4MA) induced by the interaction with free electrons. The motivation comes from the possible use of this molecule as a nanofabrication precursor and from the corresponding need to understand its elementary reactions fundamental to the electron-induced deposition. We utilize two complementary electron collision setups and support the interpretation of data by quantum chemical calculations. This way, both the dissociative ionization and dissociative electron attachment fragmentation channels are characterized. Considerable differences in the degree of precursor fragmentation in these two channels are observed. Interesting differences also appear when this precursor is compared to structurally similar iron pentacarbonyl. The present findings shed light on the recent electron-induced chemistry of Fe(CO)4MA on a surface under ultrahigh vacuum.
- Klíčová slova
- FEBID precursor, electron collision, focused electron beam-induced deposition (FEBID), iron tetracarbonyl methyl acrylate,
- Publikační typ
- časopisecké články MeSH
Irradiation-driven fragmentation and chemical transformations of molecular systems play a key role in nanofabrication processes where organometallic compounds break up due to the irradiation with focused particle beams. In this study, reactive molecular dynamics simulations have been performed to analyze the role of the molecular environment on the irradiation-induced fragmentation of molecular systems. As a case study, we consider the dissociative ionization of iron pentacarbonyl, Fe(CO)5, a widely used precursor molecule for focused electron beam-induced deposition. In connection to recent experiments, the irradiation-induced fragmentation dynamics of an isolated Fe(CO)5+ molecule is studied and compared with that of Fe(CO)5+ embedded into an argon cluster. The appearance energies of different fragments of isolated Fe(CO)5+ agree with the recent experimental data. For Fe(CO)5+ embedded into an argon cluster, the simulations reproduce the experimentally observed suppression of Fe(CO)5+ fragmentation and provide an atomistic-level understanding of this effect. Understanding irradiation-driven fragmentation patterns for molecular systems in environments facilitates the advancement of atomistic models of irradiation-induced chemistry processes involving complex molecular systems.
- Publikační typ
- časopisecké články MeSH
Details of electron-induced chemistry of methyl methacrylate (MMA) upon complexation are revealed by combining gas-phase 2D electron energy loss spectroscopy with electron attachment spectroscopy of isolated MMA and its clusters. We show that even though isolated MMA does not form stable parent anions, it efficiently thermalizes the incident electrons via intramolecular vibrational redistribution, leading to autodetachment of slow electrons. This autodetachment channel is reduced in clusters due to intermolecular energy transfer and stabilization of parent molecular anions. Bond breaking via dissociative electron attachment leads to an extensive range of anion products. The dominant OCH3- channel is accessible via core-excited resonances with threshold above 5 eV, despite the estimated thermodynamic threshold below 3 eV. This changes in clusters, where MnOCH3- anions are observed in a lower-lying resonance due to neutral dissociation of the 1(n, π*) state and electron self-scavenging. The present findings have implications for electron-induced chemistry in lithography with poly(methyl methacrylate).
- Publikační typ
- časopisecké články MeSH
Clusters in molecular beam experiments can mimic aerosol nanoclusters and provide molecular-level details for various processes relevant to atmospheric aerosol research. Aerosol nanoclusters, particles of sizes below 10 nm, are difficult to investigate in ambient atmosphere and thus represent a gap in our understanding of the new particle formation process. Recent field measurements and laboratory experiments are closing this gap; however, experiments with clusters in molecular beams are rarely involved. Yet, they can offer an unprecedented detailed insight into the processes including particles in this size range. In this Perspective, we discuss several up-to-date molecular beam experiments with clusters and demonstrate that the investigated clusters approach aerosol nanoclusters in terms of their complexity and chemistry. We examine remaining gaps between atmospheric aerosols and clusters in molecular beams and speculate about future experiments bridging these gaps.
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- časopisecké články MeSH
- přehledy MeSH
We investigate electron attachment to large ammonia clusters doped with a single benzene (Bz) molecule (NH3)N·Bz, N̄ ≈ 320. Negatively charged clusters are probed by mass spectrometry, and the energy-dependent ion yields are derived from mass spectra measured at different electron energies. The ion efficiency curves of pure ammonia clusters exhibit two maxima. At around 6 eV, (NH3)n-1NH2- ions are produced via dissociative electron attachment (DEA) to NH3 molecules. (NH3)n- ions produced at this energy are formed by DEA followed by fragment caging. At low energies around 1.3 eV, only (NH3)n- ions are formed for cluster sizes n ≥ 35 that correspond to solvated electrons in ammonia clusters. The doped (NH3)n·Bz- cluster ions exhibit essentially the same energy dependence. The (NH3)n·Bz- ions are metastable and evaporate NH3 molecule(s), while pure (NH3)n- ions are stable. The lifetime for NH3 molecule evaporation from the Bz-doped clusters was estimated as τ ≈ 18 μs. We interpret the metastability of the doped clusters by the charge localization on a Bz- ion solvated in the ammonia, which is accompanied by an energy release leading to the evaporation of NH3 molecule(s).
- Publikační typ
- časopisecké články MeSH
The uptake of molecules on nanometer-size clusters of polyaromatic hydrocarbons (PAHs) is important for the condensation of water on PAH aerosols in the atmosphere and for ice mantle growth on nanoparticles in the interstellar medium. We generate benzene clusters BzN of mean size N̅ ≈ 300 (radius R̅ ≈ 2.2 Å) as a model system for the PAH nanoparticles. Using molecular beams and mass spectrometry detection, we investigate the uptake of water, methanol, and ethanol by these clusters. All picked up molecules are highly mobile on BzN and generate clusters within <3 ms. The relative uptakes for the different investigated molecules can be directly compared and quantified. Water molecules exhibit the lowest relative pickup probability that is ∼30% lower than those for methanol and ethanol, which are approximately the same.
- Publikační typ
- časopisecké články MeSH