Forests are essential biomes for global biogeochemical cycles, and belowground microorganisms have a key role in providing relevant ecosystem services. To predict the effects of environmental changes on these ecosystem services requires a comprehensive understanding of how biotic and abiotic factors drive the composition of microbial communities in soil. However, microorganisms are not homogeneously distributed in complex environments such as soil, with different features affecting microbes at different extent depending on the niche they occupy. Indeed, this spatial heterogeneity hampers the extrapolation of microbial diversity study results from particular habitats to the ecosystem level, even if the resolution of the more recent studies has increased significantly after the standardization of high-throughput sequencing techniques. The present work intends to give a comprehensive view of the knowledge accumulated until date defining the more important drivers determining the structure of forest soil microbial communities from fine to continental scales.

• Klíčová slova
• Community structure, Drivers, Forest, Microbial diversity, Soil,
• MeSH
• Bacteria MeSH
• ekosystém * MeSH
• lesy * MeSH
• mikrobiota fyziologie   MeSH
• půda chemie   MeSH
• půdní mikrobiologie * MeSH
• Publikační typ
• časopisecké články MeSH
• přehledy MeSH
• Názvy látek
• půda MeSH

Increasing tropical cyclone (TC) pressure on temperate forests is inevitable under the recent global increase of the intensity and poleward migration of TCs. However, the long-term effects of TCs on large-scale structure and diversity of temperate forests remain unclear. Here, we aim to ascertain the legacy of TCs on forest structure and tree species richness by using structural equation models that consider several environmental gradients and use an extensive dataset containing >140,000 plots with >3 million trees from natural temperate forests across eastern United States impacted by TCs. We found that high TC activity (a combination of TC frequency and intensity) leads to a decrease in maximum tree sizes (height and diameter), an increase in tree density and basal area, and a decline in the number of tree species and recruits. We identified TC activity as the strongest predictor of forest structure and species richness in xeric (dry) forests, while it had a weaker impact on hydric (wet) forests. We highlight the sensitivity of forest structure and tree species richness to impacts of likely further increase of TC activity in interaction with climate extremes, especially drought. Our results show that increased TC activity leads to the homogenization of forest structure and reduced tree species richness in U.S. temperate forests. These findings suggest that further declines in tree species richness may be expected because of the projected increase of future levels of TC activity.

• Klíčová slova
• Eastern United States, Forest structure, Temperate forests, Tree height, Tree species diversity, Tropical cyclones,
• MeSH
• biodiverzita MeSH
• cyklonové bouře * MeSH
• lesy MeSH
• podnebí MeSH
• stromy * MeSH
• Publikační typ
• časopisecké články MeSH
• Geografické názvy
• Spojené státy americké MeSH

Deforestation has a large impact on soil fertility, especially on steep slopes, but by applying sustainable management practices, local communities in Oaxaca (Mexico) have tried to avoid the most negative effects on the forest ecosystems they manage. In this study, the characteristics and bacterial community structure were investigated from soil sampled in triplicate (n = 3) with different land use, i.e., arable, natural forest, sustainable managed, and reforested soil. The pH was significantly higher in the arable (6.2) than in the forest soils (≤ 5.3), while the organic matter was > 2 times higher in the natural forest (80.4 g/kg) and sustainable managed soil (86.3 g/kg) than in the arable (36.8 g/kg) and cleared and reforested soil (39.3 g/kg). The higher organic matter content in the first two soils was due to leaf litter, absent in the other soils. The species richness (q = 0), the typical (q = 1) and dominant bacteria (q = 2) were not affected significantly by land use. The beta diversity, however, showed a significant effect of land use on species richness (p = 0.0029). Proteobacteria (40.135%) and Actinobacteria (20.15%) were the dominant bacterial phyla, and Halomonas (14.50%) and the Verrucomicrobia DA101 (3.39%) were the dominant genera. The bacterial communities were highly significantly different in soil with different land use considering the taxonomic level of genus and OTUs (p ≤ 0.003). It was found that the sustainable managed forest provided the local community with sellable wood while maintaining the soil organic matter content, i.e., sequestered C and without altering the bacterial community structure.

• Klíčová slova
• Arable soil, Cleared and reforested soil, Natural and sustainable managed forest soil, Soil characteristics,
• MeSH
• Actinobacteria * genetika   MeSH
• Bacteria genetika   MeSH
• ekosystém * MeSH
• lesy MeSH
• půda chemie   MeSH
• půdní mikrobiologie MeSH
• Publikační typ
• časopisecké články MeSH
• Názvy látek
• půda MeSH

Increasingly available high-resolution digital elevation models (DEMs) facilitate the use of fine-scale topographic variables as proxies for microclimatic effects not captured by the coarse-grained macroclimate datasets. Species distributions and community assembly rules are, however directly shaped by microclimate and not by topography. DEM-derived topography, sometimes combined with vegetation structure, is thus widely used as a proxy for microclimatic effects in ecological research and conservation applications. However, the suitability of such a strategy has not been evaluated against in situ measured microclimate and species composition. Because bryophytes are highly sensitive to microclimate, they are ideal model organisms for such evaluation. To provide this much needed evaluation, we simultaneously recorded bryophyte species composition, microclimate, and forest vegetation structure at 218 sampling sites distributed across topographically complex sandstone landscape. Using a LiDAR-based DEM with a 1 m resolution, we calculated eleven topographic variables serving as a topographic proxy for microclimate. To characterize vegetation structure, we used hemispherical photographs and LiDAR canopy height models. Finally, we calculated eleven microclimatic variables from a continuous two-year time- series of air and soil temperature and soil moisture. To evaluate topography and vegetation structure as substitutes for the ecological effect of measured microclimate, we partitioned the variation in bryophyte species composition and richness explained by microclimate, topography, and vegetation structure. In situ measured microclimate was clearly the most important driver of bryophyte assemblages in temperate coniferous forests. The most bryophyte-relevant variables were growing degree days, maximum air temperature, and mean soil moisture. Our results thus showed that topographic variables, even when derived from high-resolution LiDAR data and combined with in situ sampled vegetation structure, cannot fully substitute effects of in situ measured microclimate on forest bryophytes.

• Klíčová slova
• Forest bryophytes, Microclimate, Soil moisture, Species composition, TMS microclimate logger, Terrain analysis,
• MeSH
• Bryophyta * MeSH
• lesy MeSH
• mikroklima * MeSH
• půda MeSH
• stromy MeSH
• teplota MeSH
• Publikační typ
• časopisecké články MeSH
• Názvy látek
• půda MeSH

In the current context of climate change, the study of microbial communities along altitudinal gradients is especially useful. Only few studies considered altitude and season at the same time. We characterized four forest sites located in the Italian Alps, along an altitude gradient (545-2000 m a.s.l.), to evaluate the effect of altitude in spring and autumn on soil microbial properties. Each site in each season was characterized with regard to soil temperature, physicochemical properties, microbial activities (respiration, enzymes), community level physiological profiles (CLPP), microbial abundance and community structure (PLFA). Increased levels of soil organic matter (SOM) and nutrients were found at higher altitudes and in autumn, resulting in a significant increase of (soil dry-mass related) microbial activities and abundance at higher altitudes. Significant site- and season-specific effects were found for enzyme production. The significant interaction of the factors site and incubation temperature for soil microbial activities indicated differences in microbial communities and their responses to temperature among sites. CLPP revealed site-specific effects. Microbial community structure was influenced by altitudinal, seasonal and/or site-specific effects. Correlations demonstrated that altitude, and not season, was the main factor determining the changes in abiotic and biotic characteristics at the sites investigated.

• Klíčová slova
• Alpine soils, PLFA, altitude, enzymes, forest, respiration,
• MeSH
• Bacteria klasifikace   genetika   izolace a purifikace   MeSH
• biodiverzita * MeSH
• fylogeneze MeSH
• klimatické změny MeSH
• lesy MeSH
• nadmořská výška MeSH
• půda chemie   MeSH
• půdní mikrobiologie * MeSH
• roční období MeSH
• teplota MeSH
• Publikační typ
• časopisecké články MeSH
• práce podpořená grantem MeSH
• Geografické názvy
• Itálie MeSH
• Názvy látek
• půda MeSH

In order to gauge ongoing and future changes to disturbance regimes, it is necessary to establish a solid baseline of historic disturbance patterns against which to evaluate these changes. Further, understanding how forest structure and composition respond to variation in past disturbances may provide insight into future resilience to climate-driven alterations of disturbance regimes. We established 184 plots (mostly 1000 m2) in 14 primary mountain Norway spruce forests in the Western Carpathians. On each plot we surveyed live and dead trees and regeneration, and cored around 25 canopy trees. Disturbance history was reconstructed by examining individual tree growth trends. The study plots were further aggregated into five groups based on disturbance history (severity and timing) to evaluate and explain its influence on forest structure. These ecosystems are characterized by a mixed severity disturbance regime with high spatiotemporal variability in severity and frequency. However, periods of synchrony in disturbance activity were also found. Specifically, a peak of canopy disturbance was found for the mid-19th century across the region (about 60% of trees established), with the most important periods of disturbance in the 1820s and from the 1840s to the 1870s. Current stand size and age structure were strongly influenced by past disturbance activity. In contrast, past disturbances did not have a significant effect on current tree density, the amount of coarse woody debris, and regeneration. High mean densities of regeneration with height >50 cm (about 1400 individuals per ha) were observed. Extensive high severity disturbances have recently affected Central European forests, spurring a discussion about the causes and consequences. We found some evidence that forests in the Western Carpathians were predisposed to recent severe disturbance events as a result of synchronized past disturbance activity, which partly homogenized size and age structure and made recent stands more vulnerable to bark beetle outbreak. Our data suggest that these events are still part of the range of natural variability. The finding that regeneration density and volume of coarse woody debris were not influenced by past disturbance illustrates that vastly different past disturbance histories are not likely to change the future trajectories of these forests. These ecosystems currently have high ecological resilience to disturbance. In conclusion, we suggest that management should recognize disturbances as a natural part of ecosystem dynamics in the mountain forests of Central Europe, account for their stochastic occurrence in management planning, and mimic their patterns to foster biodiversity in forest landscapes.

• Klíčová slova
• Dendroecology, Disturbance synchronization, Forest dynamics, Landscape ecology, Spatio-temporal pattern, Stand structure,
• Publikační typ
• časopisecké články MeSH

Species distributions are conventionally modelled using coarse-grained macroclimate data measured in open areas, potentially leading to biased predictions since most terrestrial species reside in the shade of trees. For forest plant species across Europe, we compared conventional macroclimate-based species distribution models (SDMs) with models corrected for forest microclimate buffering. We show that microclimate-based SDMs at high spatial resolution outperformed models using macroclimate and microclimate data at coarser resolution. Additionally, macroclimate-based models introduced a systematic bias in modelled species response curves, which could result in erroneous range shift predictions. Critically important for conservation science, these models were unable to identify warm and cold refugia at the range edges of species distributions. Our study emphasizes the crucial role of microclimate data when SDMs are used to gain insights into biodiversity conservation in the face of climate change, particularly given the growing policy and management focus on the conservation of refugia worldwide.

• Klíčová slova
• ForestClim, MaxEnt, ecological niche models, forest plant species, habitat suitability modelling, microclimate, microrefugia, species distribution modelling, species response curves, understorey temperatures,
• MeSH
• biodiverzita MeSH
• ekosystém MeSH
• klimatické změny MeSH
• lesy * MeSH
• mikroklima * MeSH
• rostliny MeSH
• stromy MeSH
• Publikační typ
• dopisy MeSH

Intensification of land use by humans has led to a homogenization of landscapes and decreasing resilience of ecosystems globally due to a loss of biodiversity, including the majority of forests. Biodiversity-ecosystem functioning (BEF) research has provided compelling evidence for a positive effect of biodiversity on ecosystem functions and services at the local (α-diversity) scale, but we largely lack empirical evidence on how the loss of between-patch β-diversity affects biodiversity and multifunctionality at the landscape scale (γ-diversity). Here, we present a novel concept and experimental framework for elucidating BEF patterns at α-, β-, and γ-scales in real landscapes at a forest management-relevant scale. We examine this framework using 22 temperate broadleaf production forests, dominated by Fagus sylvatica. In 11 of these forests, we manipulated the structure between forest patches by increasing variation in canopy cover and deadwood. We hypothesized that an increase in landscape heterogeneity would enhance the β-diversity of different trophic levels, as well as the β-functionality of various ecosystem functions. We will develop a new statistical framework for BEF studies extending across scales and incorporating biodiversity measures from taxonomic to functional to phylogenetic diversity using Hill numbers. We will further expand the Hill number concept to multifunctionality allowing the decomposition of γ-multifunctionality into α- and β-components. Combining this analytic framework with our experimental data will allow us to test how an increase in between patch heterogeneity affects biodiversity and multifunctionality across spatial scales and trophic levels to help inform and improve forest resilience under climate change. Such an integrative concept for biodiversity and functionality, including spatial scales and multiple aspects of diversity and multifunctionality as well as physical and environmental structure in forests, will go far beyond the current widely applied approach in forestry to increase resilience of future forests through the manipulation of tree species composition.

• Klíčová slova
• BETA-FOR, biodiversity, forest resilience, insurance hypothesis, multifunctionality, β-diversity,
• MeSH
• biodiverzita MeSH
• ekosystém * MeSH
• fylogeneze MeSH
• lesnictví MeSH
• lesy * MeSH
• lidé MeSH
• Check Tag
• lidé MeSH
• Publikační typ
• časopisecké články MeSH

The impacts of degradation and deforestation on tropical forests are poorly understood, particularly at landscape scales. We present an extensive ecosystem analysis of the impacts of logging and conversion of tropical forest to oil palm from a large-scale study in Borneo, synthesizing responses from 82 variables categorized into four ecological levels spanning a broad suite of ecosystem properties: (i) structure and environment, (ii) species traits, (iii) biodiversity, and (iv) ecosystem functions. Responses were highly heterogeneous and often complex and nonlinear. Variables that were directly impacted by the physical process of timber extraction, such as soil structure, were sensitive to even moderate amounts of logging, whereas measures of biodiversity and ecosystem functioning were generally resilient to logging but more affected by conversion to oil palm plantation.

• MeSH
• Arecaceae MeSH
• biodiverzita * MeSH
• deštný prales * MeSH
• lesnictví * MeSH
• půda chemie   MeSH
• stromy MeSH
• tropické klima * MeSH
• zachování přírodních zdrojů * MeSH
• Publikační typ
• časopisecké články MeSH
• práce podpořená grantem MeSH
• Geografické názvy
• Borneo MeSH
• Názvy látek
• půda MeSH

In Europe, forest management has controlled forest dynamics to sustain commodity production over multiple centuries. Yet over-regulation for growth and yield diminishes resilience to environmental stress as well as threatens biodiversity, leading to increasing forest susceptibility to an array of disturbances. These trends have stimulated interest in alternative management systems, including natural dynamics silviculture (NDS). NDS aims to emulate natural disturbance dynamics at stand and landscape scales through silvicultural manipulations of forest structure and landscape patterns. We adapted a "Comparability Index" (CI) to assess convergence/divergence between natural disturbances and forest management effects. We extended the original CI concept based on disturbance size and frequency by adding the residual structure of canopy trees after a disturbance as a third dimension. We populated the model by compiling data on natural disturbance dynamics and management from 13 countries in Europe, covering four major forest types (i.e., spruce, beech, oak, and pine-dominated forests). We found that natural disturbances are highly variable in size, frequency, and residual structure, but European forest management fails to encompass this complexity. Silviculture in Europe is skewed toward even-aged systems, used predominately (72.9% of management) across the countries assessed. The residual structure proved crucial in the comparison of natural disturbances and silvicultural systems. CI indicated the highest congruence between uneven-aged silvicultural systems and key natural disturbance attributes. Even so, uneven-aged practices emulated only a portion of the complexity associated with natural disturbance effects. The remaining silvicultural systems perform poorly in terms of retention compared to tree survivorship after natural disturbances. We suggest that NDS can enrich Europe's portfolio of management systems, for example where wood production is not the primary objective. NDS is especially relevant to forests managed for habitat quality, risk reduction, and a variety of ecosystem services. We suggest a holistic approach integrating NDS with more conventional practices.

• Klíčová slova
• clearcut, close-to-nature forestry, deadwood, emulation of natural dynamics, even-aged, forest management, natural disturbance, natural dynamics silviculture, residual structure, retention, severity, uneven-aged,
• MeSH
• biodiverzita MeSH
• ekosystém * MeSH
• lesnictví metody   MeSH
• lesy * MeSH
• stromy MeSH
• zachování přírodních zdrojů metody   MeSH
• Publikační typ
• časopisecké články MeSH
• práce podpořená grantem MeSH
• Research Support, U.S. Gov't, Non-P.H.S. MeSH
• Geografické názvy
• Evropa MeSH