Accumulation of Poly(3-hydroxybutyrate) Helps Bacterial Cells to Survive Freezing
Jazyk angličtina Země Spojené státy americké Médium electronic-ecollection
Typ dokumentu časopisecké články
PubMed
27315285
PubMed Central
PMC4912086
DOI
10.1371/journal.pone.0157778
PII: PONE-D-16-10369
Knihovny.cz E-zdroje
- MeSH
- Cupriavidus necator genetika metabolismus MeSH
- hydroxybutyráty metabolismus MeSH
- kryoprotektivní látky metabolismus MeSH
- organely metabolismus MeSH
- polyestery metabolismus MeSH
- Saccharomyces cerevisiae enzymologie MeSH
- zmrazování MeSH
- Publikační typ
- časopisecké články MeSH
- Názvy látek
- hydroxybutyráty MeSH
- kryoprotektivní látky MeSH
- poly-beta-hydroxybutyrate MeSH Prohlížeč
- polyestery MeSH
Accumulation of polyhydroxybutyrate (PHB) seems to be a common metabolic strategy adopted by many bacteria to cope with cold environments. This work aimed at evaluating and understanding the cryoprotective effect of PHB. At first a monomer of PHB, 3-hydroxybutyrate, was identified as a potent cryoprotectant capable of protecting model enzyme (lipase), yeast (Saccharomyces cerevisiae) and bacterial cells (Cupriavidus necator) against the adverse effects of freezing-thawing cycles. Further, the viability of the frozen-thawed PHB accumulating strain of C. necator was compared to that of the PHB non-accumulating mutant. The presence of PHB granules in cells was revealed to be a significant advantage during freezing. This might be attributed to the higher intracellular level of 3-hydroxybutyrate in PHB accumulating cells (due to the action of parallel PHB synthesis and degradation, the so-called PHB cycle), but the cryoprotective effect of PHB granules seems to be more complex. Since intracellular PHB granules retain highly flexible properties even at extremely low temperatures (observed by cryo-SEM), it can be expected that PHB granules protect cells against injury from extracellular ice. Finally, thermal analysis indicates that PHB-containing cells exhibit a higher rate of transmembrane water transport, which protects cells against the formation of intracellular ice which usually has fatal consequences.
Zobrazit více v PubMed
De Maayer P, Anderson D, Cary C, Cowan DA. Some like it cold: understanding the survival strategies of psychrophiles. EMBO reports. 2014; 15: 508–517. 10.1002/embr.201338170 PubMed DOI PMC
Hubalek Z. Protectants used in the cryopreservation of microorganisms. Cryobiology. 2003;46: 205–229. PubMed
Fuller BJ. Cryoprotectants: The essential antifreezes to protect life in the frozen state. CryoLetters. 2004;25: 375–388. PubMed
Panoff JM, Thammavongs B, Gueguen M, Boutibonnes P. Cold stress responses in mesophilicbacteria. Cryobiology. 1998;36: 75–83. PubMed
Mori S, Choi J, Devireddy RV, Bischof JC. Calorimetric measurement of water transport and intracellular ice formation during freezing in cell suspension. Cryobiology. 2012;65: 242–255. 10.1016/j.cryobiol.2012.06.010 PubMed DOI
Baek KH, Skinner DZ. Production of reactive oxygen species by freezing stress and the protective roles of antioxidant enzymes in plants. J Agric Chem Environ. 2012;1: 34–40.
Mazur P. Freezing of living cells: mechanisms and implications. Am J Physiol. 1984;247: C125–C142. PubMed
Sudesh K, Abe H, Do Y. Synthesis, structure and properties of polyhydroxyalkanoates: biological polyesters. Prog Polym Sci. 2000;25: 1503–1555.
Kadouri D, Jurkevitch E, Okon Y. Ecological and agricultural significance of bacterial polyhydroxyalkanoates. Crit Rev Microbiol. 2005;31: 55–67. PubMed
Ayub ND, Tribelli PM, Lopez NI. Polyhydroxyalkanoates are essential for maintenance of redox state in the Antarctic bacterium Pseudomonas sp. 14–3 during low temperature adaptation. Extremophiles. 2009;13: 59–66. 10.1007/s00792-008-0197-z PubMed DOI
Iustman LJR, Ruiz JA. The alternative sigma factor σs, affects polyhydroxyalkanoate metabolism in Pseudomonas putida. FEMS Microbiol Lett. 2008;284: 218–224. 10.1111/j.1574-6968.2008.01203.x PubMed DOI
Ayub ND, Pettinari MJ, Mendez BS, Lopez NI. The polyhydroxyalkanoate genes of a stress resistant Antarctic Pseudomonas are situated within a genomic island. Plasmid. 2007;58: 240–248. PubMed
Pavez P, Castillo JL, Gonzales C, Martinez M. Poly-β-hydroxyalkanoate exert protective effect against carbon starvation and frozen coditions in Sphingopyxischilensis. Curr Microbiol. 2009;59: 636–640. 10.1007/s00284-009-9485-9 PubMed DOI
Ciesielski S, Gorniak D, Mozejko J, Swiatecky A, Grzesiak J, Zdanowski M. The diversity of bacteria isolated from Antarctic freshwater reservoirs possessing the ability to produce polyhydroxyalkanoates. Curr Microbiol. 2014;69: 594–603. 10.1007/s00284-014-0629-1 PubMed DOI PMC
Goh YS, Tan IKP. Polyhydroxyalkanoate production by antarctic soil bacteria isolated from Casey Station and Signy Island. Microbial Res. 2012;167: 211–219. PubMed
Obruca S, Sedlacek P, Mravec F, Samek O, Marova I. Evaluation of 3-hydroxybutyrate as an enzyme-protective agent against heating and oxidative damage and its potential role in stress response of poly(3-hydroxybutyrate) accumulating cells. Appl Microbiol Biotechnol. 2016;100: 1365–1376. 10.1007/s00253-015-7162-4 PubMed DOI
Pinsirodom P, Parkin KL. Lipase assays. Current Protocols in Food Analytical Chemistry. 2001;C3.1.1–C3.1.13.
Obruca S, Petrik S, Benesova P, Svoboda Z, Eremka L, Marova I. Utilization of oil extracted from spent coffee grounds for sustainable production of polyhydroxyalkanoates. Appl Microbiol Biotechnol. 2014;98: 5883–8590. 10.1007/s00253-014-5653-3 PubMed DOI
Coder DM. Assessment of Cell Viability. Current Protocols in Cytometry. 1997;9.2.1–9.2.14 PubMed
Jendrossek D, Pfeiffer D. New insights in the formation of polyhydroxyalkanoate granules (carbonosomes) and novel functions of poly(3-hydroxybutyrate). Environ Microbiol. 2014;16: 2357–2373. 10.1111/1462-2920.12356 PubMed DOI
Otun SO, Meehan E, Sheng Q, Craig DQM. The Use of quasi-isothermal modulated temperature differential scanning calorimetry for the characterization of slow crystallization processes in lipid-based solid self-emulsifying systems. Pharm Res. 2015;32: 1316–1324. 10.1007/s11095-014-1535-8 PubMed DOI PMC
Tamiya T, Okahashi N, Sakuma R, Aoyama T, Akahane T, Matsumoto JJ. Freeze denaturation of enzymes and its prevention with additives. Cryobiology. 1985;22: 446–456. PubMed
Breda M, Vitolo M, Duranti MA, Pitombo RNM. Effect of freezing-thawing on invertase activity. Cryobiology. 1992;29: 281–290.
Jain NK, Roy I. Effect of trehalose on protein structure. Protein Science. 2009;18:24–36. 10.1002/pro.3 PubMed DOI PMC
Raberg M, Voigt B, Hecker M, Steinbuchel A. A closer look on the polyhydroxybutyrate- (PHB-) negative phenotype of Ralstonia eutropha PHB-4. PLOS One. 2014;9: e95907 10.1371/journal.pone.0095907 PubMed DOI PMC
Sudesh K, Fukui T, Iwata T, Doi Y. Factors affecting the freeze-fracture morphology of in vivo polyhydroxyalknoate granules. Can J Microbiol. 2000;46: 304–311. PubMed
Seki S, Kleinhans FW, Mazur P. Intracellular ice formation in yeast cells vs. cooling rate: Predictions from modeling vs. experimental observations by differential scanning calorimetry. Cryobiology. 2009;58: 157–165. 10.1016/j.cryobiol.2008.11.011 PubMed DOI PMC
Uribelarrea JL, Pacaud S, Goma G. New Method for Measuring the Cell Water-Content by Thermogravimetry. Biotechnol Lett. 1985;7: 75–80.
Roberts MF. Organic compatible solutes of halotolerant and halophilic microorganisms. Saline Systems. 2005; 1: 5 PubMed PMC
Pastor JM, Salvador M, Argandona M, Bernal V, Reina-Bueno M, Csonka LN, et al. Ectoines in cell stress protection: uses and biotechnological production. Biotechnol Adv. 2010;28: 782–801. 10.1016/j.biotechadv.2010.06.005 PubMed DOI
Sorokulova I, Olesen E, Vodyanoy V. Biopolymers for sample collection, protection, and preservation. Appl Microbiol Biotechnol. 2015;99: 5397–5406. 10.1007/s00253-015-6681-3 PubMed DOI
Goller K, Galinski EA. Protection of a model enzyme (lactate dehydrogenase) against heat, urea and freeze-thaw treatment by compatible solutes additives. J MolCatal B: Enzym. 1999;7: 37–45.
Van-Thuoc D, Hashim SO, Hatti-Kaul R, Mamo G. Ectoine-mediated protection of enzyme from the effect of pH and temperature stress: a study using Bacillus halodurans xylanase as a model. Appl Microbiol Biotechnol. 2013;97: 6271–6278. 10.1007/s00253-012-4528-8 PubMed DOI
Soto G, Setten L, Lisi C, Maurelis C, Mozzicafreddo M, et al. Hydroxybutyrate prevents protein aggregation in the halotolerant bacterium Pseudomonas sp. CT13 under abiotic stress. Exremophiles. 2012;16: 455–462. PubMed
Mazur P. Cryobiology–Freezing of biological systems. Science. 1970;168:939–949. PubMed
Andersson MM, Breccia JD, Hatti-Kaul R. Stabilizing effect of chemical additives against oxidation of lactate dehydrogenase. Biotechnol Appl Biochem. 2000;32: 145–153. PubMed
Ruiz JA, Lopez NI, Fernandez RO, Mendez BS. Polyhydroxyalkanoate degradation is associated with nucleotide accumulation and enhances stress resistance and survival of Pseudomonas oleovorans in natural water microcosm. Appl Environ Microbiol. 2001;67: 225–230. PubMed PMC
Brigham CJ, Speth DR, Rha CK, Sinskey AJ. Whole-genome microarray and gene deletion studies reveal regulation of the polyhydroxyalkanoate production cycle by the stringent response in Ralstonia eutropha H16. Appl Environ Microbiol. 2012;78: 8033–8044. 10.1128/AEM.01693-12 PubMed DOI PMC
Mezzina MP, Wetzler DE, de Almeida A, Dinjaski N, Prieto MA, Pettinari MJ. A phasin with extra talents: a polyhydroxyalkanoates granule-associated protein has chaperone activity. Environmental Microbiology. 2015; 17: 1765–1776. 10.1111/1462-2920.12636 PubMed DOI
Goh L-K, Purama RK, Sudesh K, Hunter BK, Sanders JKM. Enhancement of Stress Tolerance in the Polyhydroxyalkanoate Producers without Mobilization of the Accumulated Granules. Applied Biochemistry and Biotechnology. 2014;172(3): 1585–1598. 10.1007/s12010-013-0634-z PubMed DOI
Bonthrone KM, Clauss J, Horowitz DM, Hunter BK, Sanders JKM. The biological and physical chemistry of polyhydroxyalkanoates as seen by NMR spectroscopy. FEMS Microbiology Letters. 1992;103(2–4): 269–277.
On the bioprotective effects of 3-hydroxybutyrate: Thermodynamic study of binary 3HB-water systems