Biodiversity-ecosystem functioning experiments (BEF) typically manipulate sown species richness and composition of experimental communities to study ecosystem functioning as a response to changes in diversity. If sown species richness is taken as a measure of diversity and aboveground biomass production as a measure of community functioning, then this relationship is usually found to be positive. The sown species richness can be considered the equivalent of a local species pool in natural communities. However, in addition to species richness, realized diversity is also an important community diversity component. Realized diversity is affected by environmental filtering and biotic interactions operating within a community. As both sown species richness and the realized diversity in BEF studies (as well as local species pool vs observed realized richness in natural communities) can differ markedly, so can their effects on the community functioning. We tested this assumption using two data sets: data from a short-term pot experiment and data from the long-term Jena biodiversity plot experiment. We considered three possible predictors of community functioning (aboveground biomass production): sown species richness, realized diversity (defined as inverse of Simpson dominance index), and survivor species richness. Sown species richness affected biomass production positively in all cases. Realized diversity as well as survivor species richness had positive effects on biomass in approximately half of cases. When realized diversity or survivor species richness was tested together with sown species richness, their partial effects were none or negative. Our results suggest that we can expect positive diversity-productivity relationship when the local species pool size is the decisive factor determining realized observed diversity; in other cases, the shape of the diversity-functioning relationship may be quite opposite.

• MeSH
• biodiverzita * MeSH
• biomasa MeSH
• ekosystém * MeSH
• populační dynamika MeSH
• rostliny * MeSH
• Publikační typ
• časopisecké články MeSH
• práce podpořená grantem MeSH

BACKGROUND: Alternative organism designs (i.e. the existence of distinct combinations of traits leading to the same function or performance) are a widespread phenomenon in nature and are considered an important mechanism driving the evolution and maintenance of species trait diversity. However, alternative designs are rarely considered when investigating assembly rules and species effects on ecosystem functioning, assuming that single trait trade-offs linearly affect species fitness and niche differentiation. SCOPE: Here, we first review the concept of alternative designs, and the empirical evidence in plants indicating the importance of the complex effects of multiple traits on fitness. We then discuss how the potential decoupling of single traits from performance and function of species can compromise our ability to detect the mechanisms responsible for species coexistence and the effects of species on ecosystems. Placing traits in the continuum of organism integration level (i.e. traits hierarchically structured ranging from organ-level traits to whole-organism traits) can help in choosing traits more directly related to performance and function. CONCLUSIONS: We conclude that alternative designs have important implications for the resulting trait patterning expected from different assembly processes. For instance, when only single trade-offs are considered, environmental filtering is expected to result in decreased functional diversity. Alternatively, it may result in increased functional diversity as an outcome of alternative strategies providing different solutions to local conditions and thus supporting coexistence. Additionally, alternative designs can result in higher stability of ecosystem functioning as species filtering due to environmental changes would not result in directional changes in (effect) trait values. Assessing the combined effects of multiple plant traits and their implications for plant functioning and functions will improve our mechanistic inferences about the functional significance of community trait patterning.

• MeSH
• biodiverzita MeSH
• ekosystém * MeSH
• fenotyp MeSH
• fyziologie rostlin MeSH
• rostliny * MeSH
• Publikační typ
• časopisecké články MeSH
• práce podpořená grantem MeSH

Under global change, how biological diversity and ecosystem services are maintained in time is a fundamental question. Ecologists have long argued about multiple mechanisms by which local biodiversity might control the temporal stability of ecosystem properties. Accumulating theories and empirical evidence suggest that, together with different population and community parameters, these mechanisms largely operate through differences in functional traits among organisms. We review potential trait-stability mechanisms together with underlying tests and associated metrics. We identify various trait-based components, each accounting for different stability mechanisms, that contribute to buffering, or propagating, the effect of environmental fluctuations on ecosystem functioning. This comprehensive picture, obtained by combining different puzzle pieces of trait-stability effects, will guide future empirical and modeling investigations.

• MeSH
• biodiverzita * MeSH
• ekosystém * MeSH
• fenotyp MeSH
• Publikační typ
• časopisecké články MeSH
• práce podpořená grantem MeSH
• přehledy MeSH

The temporal stability of communities is essential for the maintenance of ecosystem functioning across trophic levels. The stabilizing effect of biodiversity is, among other factors, modulated by the level of synchrony in population fluctuations among the species in the community. What drives community synchrony, however, remains largely unclear. Community synchrony can be affected by external drivers such as disturbances, but also by the properties of the community. Species with different ecological strategies should fluctuate less synchronously than more similar species; thus, an increase in diversity of ecological strategies should decrease synchrony, and increase the stability of the community. Here, using an exceptionally large data set of ground beetle trappings in Dutch heathlands (~370,000 individuals in 19 plots, each sampled between 9 and 36 yr), we assess the drivers of community stability and synchrony, and their relationship with disturbance, species richness, and functional diversity (FD). We found no effect of disturbance (fire and topsoil removal) on community stability or synchrony, probably because of unpredictable patterns of increase or decrease of the populations. Community synchrony was overall positive, giving more support for independent and positive correlation between species than for compensatory dynamics. Synchrony decreased with increasing FD, but not with species richness. Supporting this, we found that the more species pairs differ in their traits, the less synchronously their populations fluctuate, where 74% of all pairs showed no significant correlation. Significant positive synchrony (19% of species pairs) was concentrated among pairs with low trait dissimilarity, and the 7% of pairs with significant negative temporal correlation showed no relation with pairwise functional dissimilarity. The stabilizing effect of FD via decreased synchrony supports largely untested theoretical expectations that an increased diversity of functional strategies in a community will have a stabilizing effect on community abundance. We hypothesize that because competition is low in this community, the stabilizing effect of FD reflects interspecific variation in responses to environmental fluctuations rather than competition.

• MeSH
• biodiverzita MeSH
• brouci * MeSH
• ekologie MeSH
• ekosystém MeSH
• zvířata MeSH
• Check Tag
• zvířata MeSH
• Publikační typ
• časopisecké články MeSH
• práce podpořená grantem MeSH

Biodiversity is known to increase ecosystem functioning. However, species vary in their contributions to ecosystem processes. Here, we investigated seven ecosystem functions based on the consumption of different resources in tropical ant communities. We analysed how different species influence site-level resource consumption, and determined how each species influenced performance and stability of these functions. Based on simulated extinctions, we identified 'key species' with significant functional contributions. We then investigated which traits, such as biomass, abundance, and specialisation, characterized them, and compared trait distributions across four sites to analyse differences in functional redundancy. Only few species significantly influenced ecosystem functions. Common generalist species tended to be the most important drivers of many ecosystem functions, though several specialist species also proved to be important in this study. Moreover, species-specific ecological impacts varied across sites. In addition, we found that functional redundancy varied across sites, and was highest in sites where the most common species did not simultaneously have the greatest functional impacts. Furthermore, redundancy was enhanced in sites where species were less specialised and had more even incidence distributions. Our study demonstrates that the ecological importance of a species depends on its functional traits, but also on the community context. It cannot be assessed without investigating its species-specific performance across multiple functions. Hence, to assess functional redundancy in a habitat and the potential for compensation of species loss, researchers need to study species-specific traits that concern functional performance as well as population dynamics and tolerance to environmental conditions.

• MeSH
• biodiverzita * MeSH
• biomasa MeSH
• druhová specificita MeSH
• ekologie MeSH
• ekosystém * MeSH
• Formicidae * MeSH
• populační dynamika MeSH
• zvířata MeSH
• Check Tag
• zvířata MeSH
• Publikační typ
• časopisecké články MeSH

Plant traits-the morphological, anatomical, physiological, biochemical and phenological characteristics of plants-determine how plants respond to environmental factors, affect other trophic levels, and influence ecosystem properties and their benefits and detriments to people. Plant trait data thus represent the basis for a vast area of research spanning from evolutionary biology, community and functional ecology, to biodiversity conservation, ecosystem and landscape management, restoration, biogeography and earth system modelling. Since its foundation in 2007, the TRY database of plant traits has grown continuously. It now provides unprecedented data coverage under an open access data policy and is the main plant trait database used by the research community worldwide. Increasingly, the TRY database also supports new frontiers of trait-based plant research, including the identification of data gaps and the subsequent mobilization or measurement of new data. To support this development, in this article we evaluate the extent of the trait data compiled in TRY and analyse emerging patterns of data coverage and representativeness. Best species coverage is achieved for categorical traits-almost complete coverage for 'plant growth form'. However, most traits relevant for ecology and vegetation modelling are characterized by continuous intraspecific variation and trait-environmental relationships. These traits have to be measured on individual plants in their respective environment. Despite unprecedented data coverage, we observe a humbling lack of completeness and representativeness of these continuous traits in many aspects. We, therefore, conclude that reducing data gaps and biases in the TRY database remains a key challenge and requires a coordinated approach to data mobilization and trait measurements. This can only be achieved in collaboration with other initiatives.

• MeSH
• biodiverzita MeSH
• ekologie MeSH
• ekosystém * MeSH
• přístup k informacím * MeSH
• rostliny MeSH
• Publikační typ
• časopisecké články MeSH

The loss of biodiversity is thought to have adverse effects on multiple ecosystem functions, including the decline of community stability. Decreased diversity reduces the strength of the portfolio effect, a mechanism stabilizing community temporal fluctuations. Community stability is also expected to decrease with greater variability in individual species populations and with synchrony of their fluctuations. In semi-natural meadows, eutrophication is one of the most important drivers of diversity decline; it is expected to increase species fluctuations and synchrony among them, all effects leading to lower community stability. With a 16-year time series of biomass data from a temperate species-rich meadow with fertilization and removal of the dominant species, we assessed population biomass temporal (co)variation under different management types and competition intensity, and in relation to species functional traits and to species diversity. Whereas the effect of dominant removal was relatively small (with a tendency toward lower stability), fertilization markedly decreased community stability (i.e., increased coefficient of variation in the total biomass) and species diversity. On average, the fluctuations of individual populations were mutually independent, with a slight tendency toward synchrony in unfertilized plots, and a tendency toward compensatory dynamics in fertilized plots and no effects of removal. The marked decrease of synchrony with fertilization, contrary to the majority of the results reported previously, follows the predictions of increased compensatory dynamics with increased asymmetric competition for light in a more productive environment. Synchrony increased also with species functional similarity stressing the importance of shared ecological strategies in driving similar species responses to weather fluctuations. As expected, the decrease of temporal stability of total biomass was mainly related to the decrease of species richness, with its effect remaining significant also after accounting for fertilization. The weakening of the portfolio effect with species richness decline is a crucial driver of community destabilization. However, the positive effect of species richness on temporal stability of total biomass was not due to increased compensatory dynamics, since synchrony increased with species richness. This shows that the negative effect of eutrophication on community stability does not operate through increasing synchrony, but through the reduction of diversity.

• MeSH
• biodiverzita * MeSH
• biomasa MeSH
• ekologie MeSH
• ekosystém * MeSH
• eutrofizace MeSH
• Publikační typ
• časopisecké články MeSH
• práce podpořená grantem MeSH

Endophytic fungal communities have attracted a great attention to chemists, ecologists, and microbiologists as a treasure trove of biological resource. Endophytic fungi play incredible roles in the ecosystem including abiotic and biotic stress tolerance, eco-adaptation, enhancing growth and development, and maintaining the health of their host. In recent times, endophytic fungi have drawn a special focus owing to their indispensable diversity, unique distribution, and unparalleled metabolic pathways. The endophytic fungal communities belong to three phyla, namely Mucoromycota, Basidiomycota, and Ascomycota with seven predominant classes Agaricomycetes, Dothideomycetes, Eurotiomycetes, Mortierellomycotina, Mucoromycotina, Saccharomycetes, and Sordariomycetes. In a review of a huge number of research finding, it was found that endophytic fungal communities of genera Aspergillus, Chaetomium, Fusarium, Gaeumannomyces, Metarhizium, Microsphaeropsis, Paecilomyces, Penicillium, Piriformospora, Talaromyces, Trichoderma, Verticillium, and Xylaria have been sorted out and well characterized for diverse biotechnological applications for future development. Furthermore, these communities are remarkable source of novel bioactive compounds with amazing biological activity for use in agriculture, food, and pharmaceutical industry. Endophytes are endowed with a broad range of structurally unique bioactive natural products, including alkaloids, benzopyranones, chinones, flavonoids, phenolic acids, and quinines. Subsequently, there is still an excellent opportunity to explore novel compounds from endophytic fungi among numerous plants inhabiting different niches. Furthermore, high-throughput sequencing could be a tool to study interaction between plants and endophytic fungi which may provide further opportunities to reveal unknown functions of endophytic fungal communities. The present review deals with the biodiversity of endophytic fungal communities and their biotechnological implications for agro-environmental sustainability.

• MeSH
• Ascomycota * metabolismus   MeSH
• biodiverzita MeSH
• ekosystém MeSH
• endofyty MeSH
• houby metabolismus   MeSH
• mykobiom * MeSH
• Publikační typ
• časopisecké články MeSH
• přehledy MeSH

Despite their importance, how plant communities and soil microorganisms interact to determine the capacity of ecosystems to provide multiple functions simultaneously (multifunctionality) under climate change is poorly known. We conducted a common garden experiment using grassland species to evaluate how plant functional structure and soil microbial (bacteria and protists) diversity and abundance regulate soil multifunctionality responses to joint changes in plant species richness (one, three and six species) and simulated climate change (3°C warming and 35% rainfall reduction). The effects of species richness and climate on soil multifunctionality were indirectly driven via changes in plant functional structure and their relationships with the abundance and diversity of soil bacteria and protists. More specifically, warming selected for the larger and most productive plant species, increasing the average size within communities and leading to reductions in functional plant diversity. These changes increased the total abundance of bacteria that, in turn, increased that of protists, ultimately promoting soil multifunctionality. Our work suggests that cascading effects between plant functional traits and the abundance of multitrophic soil organisms largely regulate the response of soil multifunctionality to simulated climate change, and ultimately provides novel experimental insights into the mechanisms underlying the effects of biodiversity and climate change on ecosystem functioning.

• MeSH
• biodiverzita MeSH
• ekosystém MeSH
• fyziologie bakterií MeSH
• fyziologie rostlin * MeSH
• klimatické změny * MeSH
• půda * chemie   MeSH
• půdní mikrobiologie * MeSH
• Publikační typ
• časopisecké články MeSH
• práce podpořená grantem MeSH

Biological diversity within species can be an important driver of population and ecosystem functioning. Until now, such within-species diversity effects have been attributed to underlying variation in DNA sequence. However, within-species differences, and thus potentially functional biodiversity, can also be created by epigenetic variation. Here, we show that epigenetic diversity increases the productivity and stability of plant populations. Epigenetically diverse populations of Arabidopsis thaliana produce up to 40% more biomass than epigenetically uniform populations. The positive epigenetic diversity effects are strongest when populations are grown together with competitors and infected with pathogens, and they seem to be partly driven by complementarity among epigenotypes. Our study has two implications: first, we may need to re-evaluate previous within-species diversity studies where some effects could reflect epigenetic diversity; second, we need to incorporate epigenetics into basic ecological research, by quantifying natural epigenetic diversity and testing for its ecological consequences across many different species.

• MeSH
• Arabidopsis genetika   růst a vývoj   mikrobiologie   MeSH
• biodiverzita * MeSH
• ekosystém MeSH
• epigeneze genetická * MeSH
• nemoci rostlin genetika   mikrobiologie   MeSH
• plevel růst a vývoj   MeSH
• polymorfismus genetický MeSH
• Pseudomonas syringae fyziologie   MeSH
• Senecio růst a vývoj   MeSH
• Publikační typ
• časopisecké články MeSH
• práce podpořená grantem MeSH